Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-13P-201ENST00000384248 107 ntBASIC-2.77□□□□□ -2.85
HLA-DPA1P20036 SNORD45A-201ENST00000384512 84 ntBASIC-2.77□□□□□ -2.85
HLA-DPA1P20036 RNU6-12P-201ENST00000384604 107 ntBASIC-2.77□□□□□ -2.85
HLA-DPA1P20036 RNU6-41P-201ENST00000384741 107 ntBASIC-2.77□□□□□ -2.85
HLA-DPA1P20036 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.77□□□□□ -2.85
HLA-DPA1P20036 RNU6-755P-201ENST00000364400 103 ntBASIC-2.78□□□□□ -2.85
HLA-DPA1P20036 RNU6-974P-201ENST00000384099 108 ntBASIC-2.78□□□□□ -2.85
HLA-DPA1P20036 MIR496-201ENST00000385226 102 ntBASIC-2.78□□□□□ -2.85
HLA-DPA1P20036 SNORA63.4-201ENST00000362763 126 ntBASIC-2.8□□□□□ -2.86
HLA-DPA1P20036 MIR664A-201ENST00000626086 82 ntBASIC-2.8□□□□□ -2.86
HLA-DPA1P20036 RNU6-640P-201ENST00000363693 105 ntBASIC-2.81□□□□□ -2.86
HLA-DPA1P20036 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.81□□□□□ -2.86
HLA-DPA1P20036 SNORD18C-201ENST00000362704 69 ntBASIC-2.82□□□□□ -2.86
HLA-DPA1P20036 MT-TR-201ENST00000387439 65 ntBASIC-2.82□□□□□ -2.86
HLA-DPA1P20036 RNU6-315P-201ENST00000362666 107 ntBASIC-2.83□□□□□ -2.86
HLA-DPA1P20036 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.83□□□□□ -2.86
HLA-DPA1P20036 MIR466-201ENST00000580653 84 ntBASIC-2.83□□□□□ -2.86
HLA-DPA1P20036 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.84□□□□□ -2.86
HLA-DPA1P20036 MIR581-201ENST00000384895 96 ntBASIC-2.84□□□□□ -2.86
HLA-DPA1P20036 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.85□□□□□ -2.87
HLA-DPA1P20036 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.85□□□□□ -2.87
HLA-DPA1P20036 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.86□□□□□ -2.87
HLA-DPA1P20036 MIR4748-201ENST00000578076 82 ntBASIC-2.87□□□□□ -2.87
HLA-DPA1P20036 MIR3139-201ENST00000579145 76 ntBASIC-2.87□□□□□ -2.87
HLA-DPA1P20036 IGLL4P-201ENST00000614590 133 ntBASIC-2.87□□□□□ -2.87
HLA-DPA1P20036 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.88□□□□□ -2.87
HLA-DPA1P20036 MIR3910-1-201ENST00000580936 111 ntBASIC-2.89□□□□□ -2.87
HLA-DPA1P20036 FTX_4.1-201ENST00000616291 147 ntBASIC-2.89□□□□□ -2.87
HLA-DPA1P20036 RNU6-520P-201ENST00000384717 104 ntBASIC-2.9□□□□□ -2.87
HLA-DPA1P20036 AC097484.2-201ENST00000509147 251 ntBASIC-2.9□□□□□ -2.87
HLA-DPA1P20036 MIR202-201ENST00000362219 110 ntBASIC-2.91□□□□□ -2.88
HLA-DPA1P20036 RNY1P1-201ENST00000364372 112 ntBASIC-2.91□□□□□ -2.88
HLA-DPA1P20036 RNU6-147P-201ENST00000383983 107 ntBASIC-2.91□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.91□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.92□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.93□□□□□ -2.88
HLA-DPA1P20036 RNU6-649P-201ENST00000384463 107 ntBASIC-2.93□□□□□ -2.88
HLA-DPA1P20036 SNORD116-24-201ENST00000384549 92 ntBASIC-2.93□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 SNORD60-201ENST00000383903 83 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 MIR548N-201ENST00000408742 75 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 RNU7-160P-201ENST00000516660 62 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 RNU6-789P-201ENST00000517105 102 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.94□□□□□ -2.88
HLA-DPA1P20036 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.95□□□□□ -2.88
HLA-DPA1P20036 SNORD54-201ENST00000459159 67 ntBASIC-2.95□□□□□ -2.88
HLA-DPA1P20036 MT-TM-201ENST00000387377 68 ntBASIC-2.96□□□□□ -2.88
HLA-DPA1P20036 MIR5588-201ENST00000581890 63 ntBASIC-2.96□□□□□ -2.88
HLA-DPA1P20036 RNU6-895P-201ENST00000384125 103 ntBASIC-2.97□□□□□ -2.88
HLA-DPA1P20036 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.97□□□□□ -2.88
HLA-DPA1P20036 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.97□□□□□ -2.88
HLA-DPA1P20036 RNU6-828P-201ENST00000364876 107 ntBASIC-2.98□□□□□ -2.89
HLA-DPA1P20036 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.98□□□□□ -2.89
HLA-DPA1P20036 MIR154-201ENST00000385243 84 ntBASIC-2.98□□□□□ -2.89
HLA-DPA1P20036 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.98□□□□□ -2.89
HLA-DPA1P20036 RNU6-70P-201ENST00000516438 60 ntBASIC-3□□□□□ -2.89
HLA-DPA1P20036 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.01□□□□□ -2.89
HLA-DPA1P20036 SNORA17.4-201ENST00000391287 132 ntBASIC-3.01□□□□□ -2.89
HLA-DPA1P20036 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.02□□□□□ -2.89
HLA-DPA1P20036 RNU6-979P-201ENST00000383896 107 ntBASIC-3.02□□□□□ -2.89
HLA-DPA1P20036 RNU6-810P-201ENST00000364001 107 ntBASIC-3.03□□□□□ -2.89
HLA-DPA1P20036 SNORD113-1-201ENST00000365321 69 ntBASIC-3.03□□□□□ -2.89
HLA-DPA1P20036 RNU6-919P-201ENST00000516731 104 ntBASIC-3.03□□□□□ -2.89
HLA-DPA1P20036 RNU6-92P-201ENST00000605893 104 ntBASIC-3.03□□□□□ -2.89
HLA-DPA1P20036 MIR7110-201ENST00000612638 86 ntBASIC-3.03□□□□□ -2.89
HLA-DPA1P20036 RNU6-361P-201ENST00000364454 107 ntBASIC-3.04□□□□□ -2.9
HLA-DPA1P20036 SNORD113-3-201ENST00000364830 72 ntBASIC-3.04□□□□□ -2.9
HLA-DPA1P20036 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.04□□□□□ -2.9
HLA-DPA1P20036 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.04□□□□□ -2.9
HLA-DPA1P20036 MIR548AI-201ENST00000579940 88 ntBASIC-3.05□□□□□ -2.9
HLA-DPA1P20036 SNORD60.1-201ENST00000362451 73 ntBASIC-3.06□□□□□ -2.9
HLA-DPA1P20036 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.06□□□□□ -2.9
HLA-DPA1P20036 RNU6-231P-201ENST00000517122 103 ntBASIC-3.06□□□□□ -2.9
HLA-DPA1P20036 RNU6-215P-201ENST00000365169 102 ntBASIC-3.07□□□□□ -2.9
HLA-DPA1P20036 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.07□□□□□ -2.9
HLA-DPA1P20036 RNU6-49P-201ENST00000384256 107 ntBASIC-3.07□□□□□ -2.9
HLA-DPA1P20036 SNORD20-201ENST00000384550 80 ntBASIC-3.07□□□□□ -2.9
HLA-DPA1P20036 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.07□□□□□ -2.9
HLA-DPA1P20036 RNU6-542P-201ENST00000516405 103 ntBASIC-3.07□□□□□ -2.9
HLA-DPA1P20036 MIR4712-201ENST00000583750 82 ntBASIC-3.07□□□□□ -2.9
HLA-DPA1P20036 MIR1245B-201ENST00000636115 69 ntBASIC-3.07□□□□□ -2.9
HLA-DPA1P20036 RNY4P9-201ENST00000363194 97 ntBASIC-3.08□□□□□ -2.9
HLA-DPA1P20036 AL606753.1-201ENST00000427435 87 ntBASIC-3.08□□□□□ -2.9
HLA-DPA1P20036 RNU7-171P-201ENST00000459581 62 ntBASIC-3.08□□□□□ -2.9
HLA-DPA1P20036 SNORD116.2-201ENST00000391251 93 ntBASIC-3.1□□□□□ -2.91
HLA-DPA1P20036 RNU6-141P-201ENST00000410499 105 ntBASIC-3.1□□□□□ -2.91
HLA-DPA1P20036 RNU6-68P-201ENST00000516576 104 ntBASIC-3.1□□□□□ -2.91
HLA-DPA1P20036 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.1□□□□□ -2.91
HLA-DPA1P20036 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.11□□□□□ -2.91
HLA-DPA1P20036 RNU6-530P-201ENST00000391180 107 ntBASIC-3.11□□□□□ -2.91
HLA-DPA1P20036 RNU6-912P-201ENST00000363800 104 ntBASIC-3.13□□□□□ -2.91
HLA-DPA1P20036 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.14□□□□□ -2.91
HLA-DPA1P20036 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.15□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms