Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 SNORD115-31-201ENST00000365318 82 ntBASIC-2.99□□□□□ -2.89
HMGB1P09429 RNU6-147P-201ENST00000383983 107 ntBASIC-3□□□□□ -2.89
HMGB1P09429 MIR466-201ENST00000580653 84 ntBASIC-3□□□□□ -2.89
HMGB1P09429 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.01□□□□□ -2.89
HMGB1P09429 RNY3P8-201ENST00000411366 126 ntBASIC-3.01□□□□□ -2.89
HMGB1P09429 RNU6-675P-201ENST00000384236 104 ntBASIC-3.02□□□□□ -2.89
HMGB1P09429 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.02□□□□□ -2.89
HMGB1P09429 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.02□□□□□ -2.89
HMGB1P09429 MIR579-201ENST00000385221 98 ntBASIC-3.02□□□□□ -2.89
HMGB1P09429 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.02□□□□□ -2.89
HMGB1P09429 SNORD18C-201ENST00000362704 69 ntBASIC-3.03□□□□□ -2.89
HMGB1P09429 SNORD113-1-201ENST00000365321 69 ntBASIC-3.03□□□□□ -2.89
HMGB1P09429 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.04□□□□□ -2.9
HMGB1P09429 MT-TM-201ENST00000387377 68 ntBASIC-3.04□□□□□ -2.9
HMGB1P09429 MIR7978-201ENST00000636158 59 ntBASIC-3.04□□□□□ -2.9
HMGB1P09429 RNU6-523P-201ENST00000516304 54 ntBASIC-3.05□□□□□ -2.9
HMGB1P09429 MIR8053-201ENST00000613344 75 ntBASIC-3.05□□□□□ -2.9
HMGB1P09429 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.06□□□□□ -2.9
HMGB1P09429 RNU6-172P-201ENST00000411000 93 ntBASIC-3.06□□□□□ -2.9
HMGB1P09429 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.07□□□□□ -2.9
HMGB1P09429 SNORD113.1-201ENST00000363280 73 ntBASIC-3.07□□□□□ -2.9
HMGB1P09429 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.08□□□□□ -2.9
HMGB1P09429 SNORD20-201ENST00000384550 80 ntBASIC-3.08□□□□□ -2.9
HMGB1P09429 MIR125B1-201ENST00000385236 88 ntBASIC-3.08□□□□□ -2.9
HMGB1P09429 RNU6-919P-201ENST00000516731 104 ntBASIC-3.08□□□□□ -2.9
HMGB1P09429 MIR4748-201ENST00000578076 82 ntBASIC-3.08□□□□□ -2.9
HMGB1P09429 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.09□□□□□ -2.9
HMGB1P09429 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.09□□□□□ -2.9
HMGB1P09429 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.09□□□□□ -2.9
HMGB1P09429 IGLL4P-201ENST00000614590 133 ntBASIC-3.09□□□□□ -2.9
HMGB1P09429 FTX_4.1-201ENST00000616291 147 ntBASIC-3.1□□□□□ -2.91
HMGB1P09429 AC097484.2-201ENST00000509147 251 ntBASIC-3.12□□□□□ -2.91
HMGB1P09429 RNU6-215P-201ENST00000365169 102 ntBASIC-3.13□□□□□ -2.91
HMGB1P09429 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.13□□□□□ -2.91
HMGB1P09429 RNY1P1-201ENST00000364372 112 ntBASIC-3.14□□□□□ -2.91
HMGB1P09429 RNU6-974P-201ENST00000384099 108 ntBASIC-3.14□□□□□ -2.91
HMGB1P09429 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.15□□□□□ -2.91
HMGB1P09429 SNORD60-201ENST00000383903 83 ntBASIC-3.15□□□□□ -2.91
HMGB1P09429 SNORD45A-201ENST00000384512 84 ntBASIC-3.15□□□□□ -2.91
HMGB1P09429 RNU6-520P-201ENST00000384717 104 ntBASIC-3.16□□□□□ -2.92
HMGB1P09429 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.16□□□□□ -2.92
HMGB1P09429 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.17□□□□□ -2.92
HMGB1P09429 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.18□□□□□ -2.92
HMGB1P09429 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.18□□□□□ -2.92
HMGB1P09429 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.18□□□□□ -2.92
HMGB1P09429 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.18□□□□□ -2.92
HMGB1P09429 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.18□□□□□ -2.92
HMGB1P09429 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.18□□□□□ -2.92
HMGB1P09429 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.19□□□□□ -2.92
HMGB1P09429 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.19□□□□□ -2.92
HMGB1P09429 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.19□□□□□ -2.92
HMGB1P09429 MIR581-201ENST00000384895 96 ntBASIC-3.19□□□□□ -2.92
HMGB1P09429 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.2□□□□□ -2.92
HMGB1P09429 MIR202-201ENST00000362219 110 ntBASIC-3.21□□□□□ -2.92
HMGB1P09429 RNA5SP93-201ENST00000362525 114 ntBASIC-3.21□□□□□ -2.92
HMGB1P09429 RNY4P7-201ENST00000364600 96 ntBASIC-3.21□□□□□ -2.92
HMGB1P09429 RNU6-649P-201ENST00000384463 107 ntBASIC-3.21□□□□□ -2.92
HMGB1P09429 RNU7-160P-201ENST00000516660 62 ntBASIC-3.21□□□□□ -2.92
HMGB1P09429 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.22□□□□□ -2.92
HMGB1P09429 AL603908.1-201ENST00000406098 201 ntBASIC-3.22□□□□□ -2.92
HMGB1P09429 MIR548N-201ENST00000408742 75 ntBASIC-3.22□□□□□ -2.92
HMGB1P09429 RNU6-315P-201ENST00000362666 107 ntBASIC-3.23□□□□□ -2.93
HMGB1P09429 RNU6-789P-201ENST00000517105 102 ntBASIC-3.23□□□□□ -2.93
HMGB1P09429 RNY4P9-201ENST00000363194 97 ntBASIC-3.24□□□□□ -2.93
HMGB1P09429 RNU6-828P-201ENST00000364876 107 ntBASIC-3.25□□□□□ -2.93
HMGB1P09429 MIR664A-201ENST00000626086 82 ntBASIC-3.25□□□□□ -2.93
HMGB1P09429 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.26□□□□□ -2.93
HMGB1P09429 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.27□□□□□ -2.93
HMGB1P09429 MIR5588-201ENST00000581890 63 ntBASIC-3.27□□□□□ -2.93
HMGB1P09429 RNU6-44P-201ENST00000384045 107 ntBASIC-3.28□□□□□ -2.93
HMGB1P09429 SNORA17.4-201ENST00000391287 132 ntBASIC-3.28□□□□□ -2.93
HMGB1P09429 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.29□□□□□ -2.94
HMGB1P09429 RNU6-49P-201ENST00000384256 107 ntBASIC-3.29□□□□□ -2.94
HMGB1P09429 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.29□□□□□ -2.94
HMGB1P09429 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.3□□□□□ -2.94
HMGB1P09429 MIR7110-201ENST00000612638 86 ntBASIC-3.31□□□□□ -2.94
HMGB1P09429 RNU6-361P-201ENST00000364454 107 ntBASIC-3.32□□□□□ -2.94
HMGB1P09429 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.33□□□□□ -2.94
HMGB1P09429 SNORD116-24-201ENST00000384549 92 ntBASIC-3.33□□□□□ -2.94
HMGB1P09429 RNU6-92P-201ENST00000605893 104 ntBASIC-3.33□□□□□ -2.94
HMGB1P09429 RNU6-895P-201ENST00000384125 103 ntBASIC-3.34□□□□□ -2.94
HMGB1P09429 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.34□□□□□ -2.94
HMGB1P09429 RNA5SP89-201ENST00000410300 108 ntBASIC-3.34□□□□□ -2.94
HMGB1P09429 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.36□□□□□ -2.95
HMGB1P09429 RNU6-810P-201ENST00000364001 107 ntBASIC-3.37□□□□□ -2.95
HMGB1P09429 SNORD113-3-201ENST00000364830 72 ntBASIC-3.37□□□□□ -2.95
HMGB1P09429 RNU6-979P-201ENST00000383896 107 ntBASIC-3.37□□□□□ -2.95
HMGB1P09429 RNU6-542P-201ENST00000516405 103 ntBASIC-3.37□□□□□ -2.95
HMGB1P09429 MIR548AI-201ENST00000579940 88 ntBASIC-3.37□□□□□ -2.95
HMGB1P09429 MIR154-201ENST00000385243 84 ntBASIC-3.38□□□□□ -2.95
HMGB1P09429 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.38□□□□□ -2.95
HMGB1P09429 MIR379-201ENST00000362218 67 ntBASIC-3.39□□□□□ -2.95
HMGB1P09429 RNY4P30-201ENST00000410216 95 ntBASIC-3.39□□□□□ -2.95
HMGB1P09429 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.39□□□□□ -2.95
HMGB1P09429 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.4□□□□□ -2.95
HMGB1P09429 RNU6-141P-201ENST00000410499 105 ntBASIC-3.4□□□□□ -2.95
HMGB1P09429 RNU6-231P-201ENST00000517122 103 ntBASIC-3.4□□□□□ -2.95
HMGB1P09429 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.41□□□□□ -2.96
HMGB1P09429 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.41□□□□□ -2.96
HMGB1P09429 RNU6-530P-201ENST00000391180 107 ntBASIC-3.41□□□□□ -2.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms