Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.68□□□□□ -2.52
CCDC85CA6NKD9 RNU7-88P-201ENST00000458752 63 ntBASIC-0.68□□□□□ -2.52
CCDC85CA6NKD9 SNORA25.4-201ENST00000363666 124 ntBASIC-0.69□□□□□ -2.52
CCDC85CA6NKD9 RNU6-246P-201ENST00000384702 107 ntBASIC-0.69□□□□□ -2.52
CCDC85CA6NKD9 RNU6-983P-201ENST00000516004 103 ntBASIC-0.69□□□□□ -2.52
CCDC85CA6NKD9 RNU6-539P-201ENST00000516665 103 ntBASIC-0.69□□□□□ -2.52
CCDC85CA6NKD9 U6.111-201ENST00000636093 83 ntBASIC-0.69□□□□□ -2.52
CCDC85CA6NKD9 SNORD64-201ENST00000386683 67 ntBASIC-0.7□□□□□ -2.52
CCDC85CA6NKD9 U7.5-201ENST00000517224 61 ntBASIC-0.7□□□□□ -2.52
CCDC85CA6NKD9 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.71□□□□□ -2.52
CCDC85CA6NKD9 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.71□□□□□ -2.52
CCDC85CA6NKD9 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.71□□□□□ -2.52
CCDC85CA6NKD9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
CCDC85CA6NKD9 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.73□□□□□ -2.53
CCDC85CA6NKD9 RNU6-706P-201ENST00000517229 104 ntBASIC-0.73□□□□□ -2.53
CCDC85CA6NKD9 AC005520.4-201ENST00000604337 90 ntBASIC-0.73□□□□□ -2.53
CCDC85CA6NKD9 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.74□□□□□ -2.53
CCDC85CA6NKD9 HLA-S-202ENST00000425174 53 ntBASIC-0.74□□□□□ -2.53
CCDC85CA6NKD9 RNU6-92P-201ENST00000605893 104 ntBASIC-0.74□□□□□ -2.53
CCDC85CA6NKD9 uc_338.19-201ENST00000616808 99 ntBASIC-0.74□□□□□ -2.53
CCDC85CA6NKD9 SNORD116-16-201ENST00000384533 92 ntBASIC-0.75□□□□□ -2.53
CCDC85CA6NKD9 SNORA41B-201ENST00000384785 128 ntBASIC-0.75□□□□□ -2.53
CCDC85CA6NKD9 RNU6-980P-201ENST00000516925 103 ntBASIC-0.75□□□□□ -2.53
CCDC85CA6NKD9 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.75□□□□□ -2.53
CCDC85CA6NKD9 MIR147A-201ENST00000385079 72 ntBASIC-0.76□□□□□ -2.53
CCDC85CA6NKD9 SNORD63.1-201ENST00000516178 80 ntBASIC-0.76□□□□□ -2.53
CCDC85CA6NKD9 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.76□□□□□ -2.53
CCDC85CA6NKD9 RNU6-800P-201ENST00000384473 103 ntBASIC-0.77□□□□□ -2.53
CCDC85CA6NKD9 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.77□□□□□ -2.53
CCDC85CA6NKD9 AP002795.1-201ENST00000534879 84 ntBASIC-0.77□□□□□ -2.53
CCDC85CA6NKD9 MIR382-201ENST00000637119 76 ntBASIC-0.78□□□□□ -2.53
CCDC85CA6NKD9 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.8□□□□□ -2.54
CCDC85CA6NKD9 RNU6-696P-201ENST00000390834 107 ntBASIC-0.8□□□□□ -2.54
CCDC85CA6NKD9 SNORA26.4-201ENST00000391188 123 ntBASIC-0.8□□□□□ -2.54
CCDC85CA6NKD9 RNU7-134P-201ENST00000458997 64 ntBASIC-0.8□□□□□ -2.54
CCDC85CA6NKD9 AC114801.3-201ENST00000510231 177 ntBASIC-0.8□□□□□ -2.54
CCDC85CA6NKD9 SNORD19-201ENST00000391191 68 ntBASIC-0.81□□□□□ -2.54
CCDC85CA6NKD9 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.81□□□□□ -2.54
CCDC85CA6NKD9 MIR5591-201ENST00000578248 65 ntBASIC-0.81□□□□□ -2.54
CCDC85CA6NKD9 RNU6-598P-201ENST00000364017 105 ntBASIC-0.82□□□□□ -2.54
CCDC85CA6NKD9 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.82□□□□□ -2.54
CCDC85CA6NKD9 MIR4511-201ENST00000582784 87 ntBASIC-0.82□□□□□ -2.54
CCDC85CA6NKD9 SNORD115-33-201ENST00000363723 82 ntBASIC-0.83□□□□□ -2.54
CCDC85CA6NKD9 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.83□□□□□ -2.54
CCDC85CA6NKD9 AC103706.3-201ENST00000636297 85 ntBASIC-0.83□□□□□ -2.54
CCDC85CA6NKD9 SNORA25.5-201ENST00000363782 126 ntBASIC-0.84□□□□□ -2.54
CCDC85CA6NKD9 MIR548Q-201ENST00000408404 100 ntBASIC-0.84□□□□□ -2.54
CCDC85CA6NKD9 SNORD60.1-201ENST00000362451 73 ntBASIC-0.85□□□□□ -2.55
CCDC85CA6NKD9 U2.18-201ENST00000622185 84 ntBASIC-0.85□□□□□ -2.55
CCDC85CA6NKD9 RPL35AP4-201ENST00000412007 102 ntBASIC-0.86□□□□□ -2.55
CCDC85CA6NKD9 AL353691.2-201ENST00000443795 59 ntBASIC-0.86□□□□□ -2.55
CCDC85CA6NKD9 MIR3139-201ENST00000579145 76 ntBASIC-0.86□□□□□ -2.55
CCDC85CA6NKD9 MIR8485-201ENST00000401372 91 ntBASIC-0.87□□□□□ -2.55
CCDC85CA6NKD9 SNORD1B-201ENST00000363091 84 ntBASIC-0.88□□□□□ -2.55
CCDC85CA6NKD9 MIR507-201ENST00000385234 94 ntBASIC-0.88□□□□□ -2.55
CCDC85CA6NKD9 snoU83B.1-201ENST00000517136 88 ntBASIC-0.88□□□□□ -2.55
CCDC85CA6NKD9 AC138207.3-201ENST00000585289 166 ntBASIC-0.88□□□□□ -2.55
CCDC85CA6NKD9 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.89□□□□□ -2.55
CCDC85CA6NKD9 RNA5SP26-201ENST00000362406 119 ntBASIC-0.9□□□□□ -2.55
CCDC85CA6NKD9 MIR5683-201ENST00000636514 76 ntBASIC-0.91□□□□□ -2.56
CCDC85CA6NKD9 SNORD18.1-201ENST00000363807 70 ntBASIC-0.92□□□□□ -2.56
CCDC85CA6NKD9 MIR548AA1-201ENST00000384971 97 ntBASIC-0.92□□□□□ -2.56
CCDC85CA6NKD9 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.93□□□□□ -2.56
CCDC85CA6NKD9 MIR520D-201ENST00000385002 87 ntBASIC-0.93□□□□□ -2.56
CCDC85CA6NKD9 MT-TM-201ENST00000387377 68 ntBASIC-0.93□□□□□ -2.56
CCDC85CA6NKD9 RNU6-172P-201ENST00000411000 93 ntBASIC-0.93□□□□□ -2.56
CCDC85CA6NKD9 RNU6-122P-201ENST00000516818 107 ntBASIC-0.93□□□□□ -2.56
CCDC85CA6NKD9 MIR4770-201ENST00000579149 58 ntBASIC-0.93□□□□□ -2.56
CCDC85CA6NKD9 MIR6818-201ENST00000621576 65 ntBASIC-0.94□□□□□ -2.56
CCDC85CA6NKD9 RNU6-940P-201ENST00000363433 104 ntBASIC-0.95□□□□□ -2.56
CCDC85CA6NKD9 MIR4490-201ENST00000582647 84 ntBASIC-0.95□□□□□ -2.56
CCDC85CA6NKD9 RNU6-995P-201ENST00000391244 107 ntBASIC-0.96□□□□□ -2.56
CCDC85CA6NKD9 RNU6-471P-201ENST00000383944 106 ntBASIC-0.97□□□□□ -2.56
CCDC85CA6NKD9 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.98□□□□□ -2.57
CCDC85CA6NKD9 MIR579-201ENST00000385221 98 ntBASIC-0.98□□□□□ -2.57
CCDC85CA6NKD9 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.98□□□□□ -2.57
CCDC85CA6NKD9 RNU7-151P-201ENST00000516930 53 ntBASIC-0.98□□□□□ -2.57
CCDC85CA6NKD9 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.99□□□□□ -2.57
CCDC85CA6NKD9 AC090616.4-201ENST00000448026 115 ntBASIC-0.99□□□□□ -2.57
CCDC85CA6NKD9 MIR466-201ENST00000580653 84 ntBASIC-0.99□□□□□ -2.57
CCDC85CA6NKD9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.99□□□□□ -2.57
CCDC85CA6NKD9 RNU6-608P-201ENST00000383927 104 ntBASIC-1□□□□□ -2.57
CCDC85CA6NKD9 AC110620.1-201ENST00000416042 228 ntBASIC-1□□□□□ -2.57
CCDC85CA6NKD9 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1□□□□□ -2.57
CCDC85CA6NKD9 RNU6-231P-201ENST00000517122 103 ntBASIC-1□□□□□ -2.57
CCDC85CA6NKD9 MIR7110-201ENST00000612638 86 ntBASIC-1□□□□□ -2.57
CCDC85CA6NKD9 MIR6874-201ENST00000635894 71 ntBASIC-1.01□□□□□ -2.57
CCDC85CA6NKD9 MIR29B1-201ENST00000385015 81 ntBASIC-1.02□□□□□ -2.57
CCDC85CA6NKD9 RNU6-258P-201ENST00000390884 101 ntBASIC-1.02□□□□□ -2.57
CCDC85CA6NKD9 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.02□□□□□ -2.57
CCDC85CA6NKD9 SNORD116.2-201ENST00000391251 93 ntBASIC-1.02□□□□□ -2.57
CCDC85CA6NKD9 RNA5SP86-201ENST00000390869 98 ntBASIC-1.03□□□□□ -2.57
CCDC85CA6NKD9 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.04□□□□□ -2.58
CCDC85CA6NKD9 RNU6-803P-201ENST00000516034 102 ntBASIC-1.04□□□□□ -2.58
CCDC85CA6NKD9 MIR4520-1-201ENST00000582609 70 ntBASIC-1.04□□□□□ -2.58
CCDC85CA6NKD9 MIR3170-201ENST00000582699 77 ntBASIC-1.04□□□□□ -2.58
CCDC85CA6NKD9 RNU6-247P-201ENST00000362636 107 ntBASIC-1.05□□□□□ -2.58
CCDC85CA6NKD9 RNU6-590P-201ENST00000365039 107 ntBASIC-1.05□□□□□ -2.58
CCDC85CA6NKD9 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.05□□□□□ -2.58
CCDC85CA6NKD9 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms