Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SNORD113-2-201ENST00000391082 72 ntBASIC-1.1□□□□□ -2.59
CDH9Q9ULB4 RNU7-171P-201ENST00000459581 62 ntBASIC-1.1□□□□□ -2.59
CDH9Q9ULB4 MIR4490-201ENST00000582647 84 ntBASIC-1.1□□□□□ -2.59
CDH9Q9ULB4 MIR8053-201ENST00000613344 75 ntBASIC-1.1□□□□□ -2.59
CDH9Q9ULB4 RNA5SP215-201ENST00000363440 122 ntBASIC-1.11□□□□□ -2.59
CDH9Q9ULB4 MIR889-201ENST00000401280 79 ntBASIC-1.11□□□□□ -2.59
CDH9Q9ULB4 RNU6-789P-201ENST00000517105 102 ntBASIC-1.11□□□□□ -2.59
CDH9Q9ULB4 MIR4712-201ENST00000583750 82 ntBASIC-1.11□□□□□ -2.59
CDH9Q9ULB4 RNY1P1-201ENST00000364372 112 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 RNA5SP331-201ENST00000364986 107 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 SNORD116-24-201ENST00000384549 92 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 SNORA41B-201ENST00000384785 128 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 SNX3P1X-201ENST00000414887 175 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 MTND4LP1-201ENST00000446263 157 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 IGLL4P-201ENST00000614590 133 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 U2.18-201ENST00000622185 84 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 MIR6874-201ENST00000635894 71 ntBASIC-1.12□□□□□ -2.59
CDH9Q9ULB4 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.13□□□□□ -2.59
CDH9Q9ULB4 RNU6-153P-201ENST00000364422 104 ntBASIC-1.13□□□□□ -2.59
CDH9Q9ULB4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.13□□□□□ -2.59
CDH9Q9ULB4 RNU6-630P-201ENST00000391258 106 ntBASIC-1.13□□□□□ -2.59
CDH9Q9ULB4 MIR548Q-201ENST00000408404 100 ntBASIC-1.13□□□□□ -2.59
CDH9Q9ULB4 RNU6-668P-201ENST00000364180 107 ntBASIC-1.14□□□□□ -2.59
CDH9Q9ULB4 RNA5SP192-201ENST00000364404 120 ntBASIC-1.14□□□□□ -2.59
CDH9Q9ULB4 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.14□□□□□ -2.59
CDH9Q9ULB4 MIR6502-201ENST00000617296 76 ntBASIC-1.14□□□□□ -2.59
CDH9Q9ULB4 MIR1245B-201ENST00000636115 69 ntBASIC-1.14□□□□□ -2.59
CDH9Q9ULB4 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.15□□□□□ -2.59
CDH9Q9ULB4 MIR3115-201ENST00000577915 68 ntBASIC-1.15□□□□□ -2.59
CDH9Q9ULB4 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.16□□□□□ -2.6
CDH9Q9ULB4 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.16□□□□□ -2.6
CDH9Q9ULB4 RNU6-787P-201ENST00000384032 107 ntBASIC-1.16□□□□□ -2.6
CDH9Q9ULB4 RNU6-380P-201ENST00000410207 107 ntBASIC-1.16□□□□□ -2.6
CDH9Q9ULB4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.16□□□□□ -2.6
CDH9Q9ULB4 MIR429-201ENST00000362106 83 ntBASIC-1.17□□□□□ -2.6
CDH9Q9ULB4 SNORD115-31-201ENST00000365318 82 ntBASIC-1.17□□□□□ -2.6
CDH9Q9ULB4 AC138207.3-201ENST00000585289 166 ntBASIC-1.17□□□□□ -2.6
CDH9Q9ULB4 RNU6-79P-201ENST00000362511 107 ntBASIC-1.18□□□□□ -2.6
CDH9Q9ULB4 SNORD1B-201ENST00000363091 84 ntBASIC-1.18□□□□□ -2.6
CDH9Q9ULB4 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.18□□□□□ -2.6
CDH9Q9ULB4 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.18□□□□□ -2.6
CDH9Q9ULB4 MIR4666B-201ENST00000578142 81 ntBASIC-1.18□□□□□ -2.6
CDH9Q9ULB4 MIR3170-201ENST00000582699 77 ntBASIC-1.18□□□□□ -2.6
CDH9Q9ULB4 U2.22-201ENST00000636441 106 ntBASIC-1.18□□□□□ -2.6
CDH9Q9ULB4 RNY4P30-201ENST00000410216 95 ntBASIC-1.19□□□□□ -2.6
CDH9Q9ULB4 MIR3134-201ENST00000579433 74 ntBASIC-1.19□□□□□ -2.6
CDH9Q9ULB4 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.2□□□□□ -2.6
CDH9Q9ULB4 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.2□□□□□ -2.6
CDH9Q9ULB4 RNU6-258P-201ENST00000390884 101 ntBASIC-1.2□□□□□ -2.6
CDH9Q9ULB4 RNU6-70P-201ENST00000516438 60 ntBASIC-1.2□□□□□ -2.6
CDH9Q9ULB4 RNU6-687P-201ENST00000516443 89 ntBASIC-1.2□□□□□ -2.6
CDH9Q9ULB4 RNU6-706P-201ENST00000517229 104 ntBASIC-1.2□□□□□ -2.6
CDH9Q9ULB4 MIR3165-201ENST00000579874 75 ntBASIC-1.2□□□□□ -2.6
CDH9Q9ULB4 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.2□□□□□ -2.6
CDH9Q9ULB4 MIR494-201ENST00000349529 81 ntBASIC-1.21□□□□□ -2.6
CDH9Q9ULB4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.21□□□□□ -2.6
CDH9Q9ULB4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.21□□□□□ -2.6
CDH9Q9ULB4 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.22□□□□□ -2.6
CDH9Q9ULB4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.22□□□□□ -2.6
CDH9Q9ULB4 MIR1468-201ENST00000410600 86 ntBASIC-1.22□□□□□ -2.6
CDH9Q9ULB4 MIR548AI-201ENST00000579940 88 ntBASIC-1.22□□□□□ -2.6
CDH9Q9ULB4 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.23□□□□□ -2.61
CDH9Q9ULB4 MIR450A2-201ENST00000385022 100 ntBASIC-1.23□□□□□ -2.61
CDH9Q9ULB4 MIR154-201ENST00000385243 84 ntBASIC-1.24□□□□□ -2.61
CDH9Q9ULB4 MIR601-201ENST00000385256 79 ntBASIC-1.24□□□□□ -2.61
CDH9Q9ULB4 AC018880.2-201ENST00000414265 201 ntBASIC-1.24□□□□□ -2.61
CDH9Q9ULB4 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.24□□□□□ -2.61
CDH9Q9ULB4 RNA5SP173-201ENST00000364857 136 ntBASIC-1.25□□□□□ -2.61
CDH9Q9ULB4 RNU6-294P-201ENST00000364999 102 ntBASIC-1.25□□□□□ -2.61
CDH9Q9ULB4 MIR4520-1-201ENST00000582609 70 ntBASIC-1.25□□□□□ -2.61
CDH9Q9ULB4 MIR7978-201ENST00000636158 59 ntBASIC-1.25□□□□□ -2.61
CDH9Q9ULB4 RNU7-151P-201ENST00000516930 53 ntBASIC-1.26□□□□□ -2.61
CDH9Q9ULB4 MIR5591-201ENST00000578248 65 ntBASIC-1.26□□□□□ -2.61
CDH9Q9ULB4 RNU6-400P-201ENST00000391173 106 ntBASIC-1.27□□□□□ -2.61
CDH9Q9ULB4 MIR5582-201ENST00000579697 68 ntBASIC-1.27□□□□□ -2.61
CDH9Q9ULB4 MIR198-201ENST00000637333 62 ntBASIC-1.27□□□□□ -2.61
CDH9Q9ULB4 RNU6-563P-201ENST00000364872 108 ntBASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 RNU6-242P-201ENST00000384359 107 ntBASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 MIR125B1-201ENST00000385236 88 ntBASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 RNU6-172P-201ENST00000411000 93 ntBASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 MIR4770-201ENST00000579149 58 ntBASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 AC062037.1-201ENST00000605302 128 ntBASIC-1.28□□□□□ -2.61
CDH9Q9ULB4 RNU6-895P-201ENST00000384125 103 ntBASIC-1.29□□□□□ -2.62
CDH9Q9ULB4 RNU6-542P-201ENST00000516405 103 ntBASIC-1.29□□□□□ -2.62
CDH9Q9ULB4 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.29□□□□□ -2.62
CDH9Q9ULB4 MIR23C-201ENST00000579846 100 ntBASIC-1.29□□□□□ -2.62
CDH9Q9ULB4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.29□□□□□ -2.62
CDH9Q9ULB4 RNA5SP86-201ENST00000390869 98 ntBASIC-1.3□□□□□ -2.62
CDH9Q9ULB4 HLA-S-202ENST00000425174 53 ntBASIC-1.3□□□□□ -2.62
CDH9Q9ULB4 AC120024.2-201ENST00000576526 175 ntBASIC-1.3□□□□□ -2.62
CDH9Q9ULB4 RNU6-669P-201ENST00000365575 107 ntBASIC-1.31□□□□□ -2.62
CDH9Q9ULB4 RNU6-540P-201ENST00000384622 101 ntBASIC-1.31□□□□□ -2.62
CDH9Q9ULB4 MIR579-201ENST00000385221 98 ntBASIC-1.31□□□□□ -2.62
CDH9Q9ULB4 RNU6-523P-201ENST00000516304 54 ntBASIC-1.31□□□□□ -2.62
CDH9Q9ULB4 RNU6-820P-201ENST00000384273 107 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms