Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SNORD113-2-201ENST00000391082 72 ntBASIC-1.03□□□□□ -2.57
LIN7CQ9NUP9 MIR548AX-201ENST00000580117 73 ntBASIC-1.03□□□□□ -2.57
LIN7CQ9NUP9 U6.58-201ENST00000613107 107 ntBASIC-1.03□□□□□ -2.57
LIN7CQ9NUP9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
LIN7CQ9NUP9 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.04□□□□□ -2.58
LIN7CQ9NUP9 SNORA26.4-201ENST00000391188 123 ntBASIC-1.05□□□□□ -2.58
LIN7CQ9NUP9 RNA5SP225-201ENST00000410874 135 ntBASIC-1.05□□□□□ -2.58
LIN7CQ9NUP9 MIR429-201ENST00000362106 83 ntBASIC-1.06□□□□□ -2.58
LIN7CQ9NUP9 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.06□□□□□ -2.58
LIN7CQ9NUP9 MIR196A1-201ENST00000388006 70 ntBASIC-1.06□□□□□ -2.58
LIN7CQ9NUP9 SNORD115-33-201ENST00000363723 82 ntBASIC-1.07□□□□□ -2.58
LIN7CQ9NUP9 RNU6-732P-201ENST00000516033 103 ntBASIC-1.07□□□□□ -2.58
LIN7CQ9NUP9 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 RNU6-431P-201ENST00000383874 107 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 MIR147A-201ENST00000385079 72 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 RNU6-634P-201ENST00000459134 106 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 SNORD63.1-201ENST00000516178 80 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 MIR3681-201ENST00000580089 72 ntBASIC-1.08□□□□□ -2.58
LIN7CQ9NUP9 SNORD64-201ENST00000386683 67 ntBASIC-1.09□□□□□ -2.58
LIN7CQ9NUP9 HAR1A.1-201ENST00000459583 118 ntBASIC-1.1□□□□□ -2.59
LIN7CQ9NUP9 MIR889-201ENST00000401280 79 ntBASIC-1.11□□□□□ -2.59
LIN7CQ9NUP9 RNU6-540P-201ENST00000384622 101 ntBASIC-1.12□□□□□ -2.59
LIN7CQ9NUP9 SNORD83B-201ENST00000386745 93 ntBASIC-1.12□□□□□ -2.59
LIN7CQ9NUP9 RNU6-523P-201ENST00000516304 54 ntBASIC-1.12□□□□□ -2.59
LIN7CQ9NUP9 AL353691.2-201ENST00000443795 59 ntBASIC-1.13□□□□□ -2.59
LIN7CQ9NUP9 RNU6-30P-201ENST00000384561 107 ntBASIC-1.14□□□□□ -2.59
LIN7CQ9NUP9 RNU6-696P-201ENST00000390834 107 ntBASIC-1.14□□□□□ -2.59
LIN7CQ9NUP9 RNU6-663P-201ENST00000391105 106 ntBASIC-1.14□□□□□ -2.59
LIN7CQ9NUP9 RNU6-542P-201ENST00000516405 103 ntBASIC-1.14□□□□□ -2.59
LIN7CQ9NUP9 AL500527.2-201ENST00000454105 95 ntBASIC-1.15□□□□□ -2.59
LIN7CQ9NUP9 SNORD116-16-201ENST00000384533 92 ntBASIC-1.16□□□□□ -2.6
LIN7CQ9NUP9 SNORA41B-201ENST00000384785 128 ntBASIC-1.16□□□□□ -2.6
LIN7CQ9NUP9 RNU6-598P-201ENST00000364017 105 ntBASIC-1.17□□□□□ -2.6
LIN7CQ9NUP9 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.17□□□□□ -2.6
LIN7CQ9NUP9 SNORD19-201ENST00000391191 68 ntBASIC-1.17□□□□□ -2.6
LIN7CQ9NUP9 SCARNA17-201ENST00000516183 144 ntBASIC-1.17□□□□□ -2.6
LIN7CQ9NUP9 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.17□□□□□ -2.6
LIN7CQ9NUP9 MIR382-201ENST00000637119 76 ntBASIC-1.17□□□□□ -2.6
LIN7CQ9NUP9 RNU6-871P-201ENST00000516122 100 ntBASIC-1.18□□□□□ -2.6
LIN7CQ9NUP9 SNORD30.1-201ENST00000391309 70 ntBASIC-1.19□□□□□ -2.6
LIN7CQ9NUP9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.19□□□□□ -2.6
LIN7CQ9NUP9 RNU6-630P-201ENST00000391258 106 ntBASIC-1.2□□□□□ -2.6
LIN7CQ9NUP9 MIR548Q-201ENST00000408404 100 ntBASIC-1.2□□□□□ -2.6
LIN7CQ9NUP9 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.2□□□□□ -2.6
LIN7CQ9NUP9 snoU83B.1-201ENST00000517136 88 ntBASIC-1.2□□□□□ -2.6
LIN7CQ9NUP9 MIR4499-201ENST00000584834 69 ntBASIC-1.21□□□□□ -2.6
LIN7CQ9NUP9 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.22□□□□□ -2.6
LIN7CQ9NUP9 RNA5SP67-201ENST00000516422 131 ntBASIC-1.22□□□□□ -2.6
LIN7CQ9NUP9 AP002795.1-201ENST00000534879 84 ntBASIC-1.22□□□□□ -2.6
LIN7CQ9NUP9 MIR5683-201ENST00000636514 76 ntBASIC-1.22□□□□□ -2.6
LIN7CQ9NUP9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
LIN7CQ9NUP9 SNORD57-201ENST00000448188 72 ntBASIC-1.23□□□□□ -2.61
LIN7CQ9NUP9 U2.18-201ENST00000622185 84 ntBASIC-1.23□□□□□ -2.61
LIN7CQ9NUP9 MIR4662A-201ENST00000637499 67 ntBASIC-1.23□□□□□ -2.61
LIN7CQ9NUP9 RNU6-92P-201ENST00000605893 104 ntBASIC-1.24□□□□□ -2.61
LIN7CQ9NUP9 uc_338.19-201ENST00000616808 99 ntBASIC-1.24□□□□□ -2.61
LIN7CQ9NUP9 RNU6-776P-201ENST00000364403 104 ntBASIC-1.25□□□□□ -2.61
LIN7CQ9NUP9 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.25□□□□□ -2.61
LIN7CQ9NUP9 MIR507-201ENST00000385234 94 ntBASIC-1.25□□□□□ -2.61
LIN7CQ9NUP9 MIR4490-201ENST00000582647 84 ntBASIC-1.25□□□□□ -2.61
LIN7CQ9NUP9 RNU6-649P-201ENST00000384463 107 ntBASIC-1.26□□□□□ -2.61
LIN7CQ9NUP9 SNORA25.4-201ENST00000363666 124 ntBASIC-1.27□□□□□ -2.61
LIN7CQ9NUP9 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.27□□□□□ -2.61
LIN7CQ9NUP9 SNORD1B-201ENST00000363091 84 ntBASIC-1.28□□□□□ -2.61
LIN7CQ9NUP9 SNORA72.7-201ENST00000516349 94 ntBASIC-1.29□□□□□ -2.62
LIN7CQ9NUP9 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.3□□□□□ -2.62
LIN7CQ9NUP9 MIR6738-201ENST00000619620 64 ntBASIC-1.3□□□□□ -2.62
LIN7CQ9NUP9 MIR409-201ENST00000362237 79 ntBASIC-1.31□□□□□ -2.62
LIN7CQ9NUP9 MIR587-201ENST00000384845 96 ntBASIC-1.31□□□□□ -2.62
LIN7CQ9NUP9 RNU6-539P-201ENST00000516665 103 ntBASIC-1.31□□□□□ -2.62
LIN7CQ9NUP9 AC005520.4-201ENST00000604337 90 ntBASIC-1.31□□□□□ -2.62
LIN7CQ9NUP9 U6.111-201ENST00000636093 83 ntBASIC-1.31□□□□□ -2.62
LIN7CQ9NUP9 MIR548AA1-201ENST00000384971 97 ntBASIC-1.32□□□□□ -2.62
LIN7CQ9NUP9 RNY1P9-201ENST00000532431 109 ntBASIC-1.32□□□□□ -2.62
LIN7CQ9NUP9 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.33□□□□□ -2.62
LIN7CQ9NUP9 MIR378F-201ENST00000578143 78 ntBASIC-1.33□□□□□ -2.62
LIN7CQ9NUP9 SNORD60.1-201ENST00000362451 73 ntBASIC-1.34□□□□□ -2.62
LIN7CQ9NUP9 RNA5SP26-201ENST00000362406 119 ntBASIC-1.35□□□□□ -2.63
LIN7CQ9NUP9 MIR29B1-201ENST00000385015 81 ntBASIC-1.35□□□□□ -2.63
LIN7CQ9NUP9 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.35□□□□□ -2.63
LIN7CQ9NUP9 MIR4324-201ENST00000584846 72 ntBASIC-1.35□□□□□ -2.63
LIN7CQ9NUP9 MIR6818-201ENST00000621576 65 ntBASIC-1.35□□□□□ -2.63
LIN7CQ9NUP9 RNU6-10P-201ENST00000384036 107 ntBASIC-1.36□□□□□ -2.63
LIN7CQ9NUP9 RNU6-172P-201ENST00000411000 93 ntBASIC-1.36□□□□□ -2.63
LIN7CQ9NUP9 RPL35AP4-201ENST00000412007 102 ntBASIC-1.36□□□□□ -2.63
LIN7CQ9NUP9 MIR4306-201ENST00000583390 91 ntBASIC-1.36□□□□□ -2.63
LIN7CQ9NUP9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.37□□□□□ -2.63
LIN7CQ9NUP9 SNORA25.5-201ENST00000363782 126 ntBASIC-1.38□□□□□ -2.63
LIN7CQ9NUP9 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.39□□□□□ -2.63
LIN7CQ9NUP9 RNU6-995P-201ENST00000391244 107 ntBASIC-1.39□□□□□ -2.63
LIN7CQ9NUP9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.4□□□□□ -2.63
LIN7CQ9NUP9 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.4□□□□□ -2.63
LIN7CQ9NUP9 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.4□□□□□ -2.63
LIN7CQ9NUP9 RNU7-151P-201ENST00000516930 53 ntBASIC-1.4□□□□□ -2.63
LIN7CQ9NUP9 MIR3170-201ENST00000582699 77 ntBASIC-1.4□□□□□ -2.63
LIN7CQ9NUP9 MIR4511-201ENST00000582784 87 ntBASIC-1.4□□□□□ -2.63
LIN7CQ9NUP9 RNU6-800P-201ENST00000384473 103 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms