Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR520D-201ENST00000385002 87 ntBASIC0.87□□□□□ -2.27
COL25A1Q9BXS0 RNU7-129P-201ENST00000516128 62 ntBASIC0.87□□□□□ -2.27
COL25A1Q9BXS0 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
COL25A1Q9BXS0 RNU6-863P-201ENST00000515989 104 ntBASIC0.86□□□□□ -2.27
COL25A1Q9BXS0 SNORA62.5-201ENST00000516634 120 ntBASIC0.86□□□□□ -2.27
COL25A1Q9BXS0 AC103810.9-201ENST00000606688 112 ntBASIC0.86□□□□□ -2.27
COL25A1Q9BXS0 SNORA27.2-201ENST00000363365 126 ntBASIC0.85□□□□□ -2.27
COL25A1Q9BXS0 RNU6-900P-201ENST00000384498 102 ntBASIC0.85□□□□□ -2.27
COL25A1Q9BXS0 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
COL25A1Q9BXS0 AC108740.1-201ENST00000498629 225 ntBASIC0.85□□□□□ -2.27
COL25A1Q9BXS0 MIR4426-201ENST00000640330 63 ntBASIC0.85□□□□□ -2.27
COL25A1Q9BXS0 SNORD114-15-201ENST00000364687 72 ntBASIC0.84□□□□□ -2.27
COL25A1Q9BXS0 SNORD19-201ENST00000391191 68 ntBASIC0.84□□□□□ -2.27
COL25A1Q9BXS0 Z95118.1-201ENST00000421372 247 ntBASIC0.84□□□□□ -2.27
COL25A1Q9BXS0 MIR4514-201ENST00000581410 57 ntBASIC0.84□□□□□ -2.27
COL25A1Q9BXS0 Y_RNA.699-201ENST00000516803 93 ntBASIC0.83□□□□□ -2.28
COL25A1Q9BXS0 MIR548Q-201ENST00000408404 100 ntBASIC0.82□□□□□ -2.28
COL25A1Q9BXS0 MIR5704-201ENST00000584029 77 ntBASIC0.82□□□□□ -2.28
COL25A1Q9BXS0 MIR8068-201ENST00000618032 68 ntBASIC0.82□□□□□ -2.28
COL25A1Q9BXS0 uc_338.17-201ENST00000619633 179 ntBASIC0.82□□□□□ -2.28
COL25A1Q9BXS0 SNORD44.1-201ENST00000363202 61 ntBASIC0.81□□□□□ -2.28
COL25A1Q9BXS0 SNORA42.1-201ENST00000363515 137 ntBASIC0.81□□□□□ -2.28
COL25A1Q9BXS0 RNA5SP368-201ENST00000364298 116 ntBASIC0.8□□□□□ -2.28
COL25A1Q9BXS0 RNU6-361P-201ENST00000364454 107 ntBASIC0.8□□□□□ -2.28
COL25A1Q9BXS0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
COL25A1Q9BXS0 IGLVI-20-201ENST00000519296 130 ntBASIC0.79□□□□□ -2.28
COL25A1Q9BXS0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
COL25A1Q9BXS0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.78□□□□□ -2.28
COL25A1Q9BXS0 SNORD111B-201ENST00000408587 80 ntBASIC0.78□□□□□ -2.28
COL25A1Q9BXS0 RNU6-133P-201ENST00000383989 107 ntBASIC0.77□□□□□ -2.29
COL25A1Q9BXS0 RNU6-455P-201ENST00000384681 107 ntBASIC0.77□□□□□ -2.29
COL25A1Q9BXS0 MIR124-2-201ENST00000385081 109 ntBASIC0.77□□□□□ -2.29
COL25A1Q9BXS0 RNU6-758P-201ENST00000516292 89 ntBASIC0.77□□□□□ -2.29
COL25A1Q9BXS0 MIR6854-201ENST00000614935 69 ntBASIC0.77□□□□□ -2.29
COL25A1Q9BXS0 MIR5087-201ENST00000635826 76 ntBASIC0.77□□□□□ -2.29
COL25A1Q9BXS0 RNU6-127P-201ENST00000390897 107 ntBASIC0.76□□□□□ -2.29
COL25A1Q9BXS0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL25A1Q9BXS0 RNU6-1233P-201ENST00000362922 102 ntBASIC0.75□□□□□ -2.29
COL25A1Q9BXS0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
COL25A1Q9BXS0 SNX3P1X-201ENST00000414887 175 ntBASIC0.75□□□□□ -2.29
COL25A1Q9BXS0 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
COL25A1Q9BXS0 AC023932.2-201ENST00000603176 175 ntBASIC0.74□□□□□ -2.29
COL25A1Q9BXS0 MIR6514-201ENST00000622549 70 ntBASIC0.74□□□□□ -2.29
COL25A1Q9BXS0 RNU6-485P-201ENST00000363475 107 ntBASIC0.73□□□□□ -2.29
COL25A1Q9BXS0 RNA5SP499-201ENST00000363982 119 ntBASIC0.73□□□□□ -2.29
COL25A1Q9BXS0 RNU6-300P-201ENST00000459080 104 ntBASIC0.73□□□□□ -2.29
COL25A1Q9BXS0 AC114755.3-201ENST00000481111 251 ntBASIC0.73□□□□□ -2.29
COL25A1Q9BXS0 RNA5SP169-201ENST00000517268 117 ntBASIC0.73□□□□□ -2.29
COL25A1Q9BXS0 CR383656.4-201ENST00000546909 122 ntBASIC0.73□□□□□ -2.29
COL25A1Q9BXS0 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
COL25A1Q9BXS0 MIR202-201ENST00000362219 110 ntBASIC0.72□□□□□ -2.29
COL25A1Q9BXS0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.72□□□□□ -2.29
COL25A1Q9BXS0 RNY1P9-201ENST00000532431 109 ntBASIC0.72□□□□□ -2.29
COL25A1Q9BXS0 AP002795.1-201ENST00000534879 84 ntBASIC0.72□□□□□ -2.29
COL25A1Q9BXS0 MIR103A1-201ENST00000362165 78 ntBASIC0.71□□□□□ -2.3
COL25A1Q9BXS0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.7□□□□□ -2.3
COL25A1Q9BXS0 SNORD56B-201ENST00000384713 71 ntBASIC0.7□□□□□ -2.3
COL25A1Q9BXS0 SNORA17.4-201ENST00000391287 132 ntBASIC0.7□□□□□ -2.3
COL25A1Q9BXS0 RNY3P8-201ENST00000411366 126 ntBASIC0.7□□□□□ -2.3
COL25A1Q9BXS0 RNU6-608P-201ENST00000383927 104 ntBASIC0.69□□□□□ -2.3
COL25A1Q9BXS0 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
COL25A1Q9BXS0 RNU6-180P-201ENST00000516697 61 ntBASIC0.69□□□□□ -2.3
COL25A1Q9BXS0 MIR148A-201ENST00000362215 68 ntBASIC0.68□□□□□ -2.3
COL25A1Q9BXS0 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
COL25A1Q9BXS0 MIR548H2-201ENST00000408874 88 ntBASIC0.68□□□□□ -2.3
COL25A1Q9BXS0 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
COL25A1Q9BXS0 RNU6-815P-201ENST00000384080 113 ntBASIC0.67□□□□□ -2.3
COL25A1Q9BXS0 MIR643-201ENST00000385267 97 ntBASIC0.67□□□□□ -2.3
COL25A1Q9BXS0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.67□□□□□ -2.3
COL25A1Q9BXS0 SNORA68.3-201ENST00000515906 83 ntBASIC0.67□□□□□ -2.3
COL25A1Q9BXS0 RNU6-176P-201ENST00000517196 105 ntBASIC0.67□□□□□ -2.3
COL25A1Q9BXS0 RNU6-901P-201ENST00000384593 106 ntBASIC0.66□□□□□ -2.3
COL25A1Q9BXS0 RNA5SP163-201ENST00000410304 99 ntBASIC0.65□□□□□ -2.31
COL25A1Q9BXS0 MIR5683-201ENST00000636514 76 ntBASIC0.65□□□□□ -2.31
COL25A1Q9BXS0 MIR1207-201ENST00000408249 87 ntBASIC0.63□□□□□ -2.31
COL25A1Q9BXS0 U4.2-201ENST00000618561 85 ntBASIC0.63□□□□□ -2.31
COL25A1Q9BXS0 MIRLET7D-201ENST00000362263 87 ntBASIC0.62□□□□□ -2.31
COL25A1Q9BXS0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
COL25A1Q9BXS0 AC244250.2-201ENST00000418731 148 ntBASIC0.61□□□□□ -2.31
COL25A1Q9BXS0 SNORA26.4-201ENST00000391188 123 ntBASIC0.6□□□□□ -2.31
COL25A1Q9BXS0 MIR892B-201ENST00000401279 77 ntBASIC0.6□□□□□ -2.31
COL25A1Q9BXS0 AL353691.2-201ENST00000443795 59 ntBASIC0.6□□□□□ -2.31
COL25A1Q9BXS0 AC104692.1-201ENST00000472406 90 ntBASIC0.6□□□□□ -2.31
COL25A1Q9BXS0 AC069113.3-201ENST00000521019 150 ntBASIC0.6□□□□□ -2.31
COL25A1Q9BXS0 MIR4280-201ENST00000582178 76 ntBASIC0.6□□□□□ -2.31
COL25A1Q9BXS0 Y_RNA.610-201ENST00000410681 103 ntBASIC0.58□□□□□ -2.32
COL25A1Q9BXS0 MIR4493-201ENST00000584016 73 ntBASIC0.58□□□□□ -2.32
COL25A1Q9BXS0 MIR655-201ENST00000362159 97 ntBASIC0.57□□□□□ -2.32
COL25A1Q9BXS0 SNORD115-33-201ENST00000363723 82 ntBASIC0.57□□□□□ -2.32
COL25A1Q9BXS0 SNORD60-201ENST00000383903 83 ntBASIC0.57□□□□□ -2.32
COL25A1Q9BXS0 MIR604-201ENST00000384880 94 ntBASIC0.57□□□□□ -2.32
COL25A1Q9BXS0 MIR548N-201ENST00000408742 75 ntBASIC0.56□□□□□ -2.32
COL25A1Q9BXS0 SNORD95.1-201ENST00000364099 68 ntBASIC0.55□□□□□ -2.32
COL25A1Q9BXS0 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
COL25A1Q9BXS0 AL445193.1-201ENST00000441183 141 ntBASIC0.55□□□□□ -2.32
COL25A1Q9BXS0 MIR6718-201ENST00000616153 80 ntBASIC0.55□□□□□ -2.32
COL25A1Q9BXS0 SNORD18.2-201ENST00000459604 70 ntBASIC0.54□□□□□ -2.32
COL25A1Q9BXS0 MIR5190-201ENST00000581537 80 ntBASIC0.53□□□□□ -2.32
COL25A1Q9BXS0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
COL25A1Q9BXS0 SNORD74.6-201ENST00000364796 70 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 246.4 ms