Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.53□□□□□ -2.32
SALL3Q9BXA9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
SALL3Q9BXA9 SNORD114-29-201ENST00000364819 70 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR106A-201ENST00000384870 81 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR548H2-201ENST00000408874 88 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR1468-201ENST00000410600 86 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 RNU7-55P-201ENST00000459426 62 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 AC114755.3-201ENST00000481111 251 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 RNA5SP67-201ENST00000516422 131 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR499B-201ENST00000636498 73 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR429-201ENST00000362106 83 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 RNU6-361P-201ENST00000364454 107 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 SNORD2-201ENST00000459163 69 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 MIR4514-201ENST00000581410 57 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 AC013734.1-201ENST00000619329 111 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 RNU6-1091P-201ENST00000363945 107 ntBASIC0.5□□□□□ -2.33
SALL3Q9BXA9 Y_RNA.320-201ENST00000365144 102 ntBASIC0.5□□□□□ -2.33
SALL3Q9BXA9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.5□□□□□ -2.33
SALL3Q9BXA9 Y_RNA.382-201ENST00000365672 114 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 SNORD56B-201ENST00000384713 71 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 Y_RNA.613-201ENST00000410726 97 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 AC096531.1-201ENST00000419107 107 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 AC104408.1-201ENST00000605241 170 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 MIR4317-201ENST00000637586 65 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 Y_RNA.134-201ENST00000363435 105 ntBASIC0.48□□□□□ -2.33
SALL3Q9BXA9 RNA5SP128-201ENST00000365305 116 ntBASIC0.48□□□□□ -2.33
SALL3Q9BXA9 AL391099.1-201ENST00000624635 187 ntBASIC0.48□□□□□ -2.33
SALL3Q9BXA9 SNORA27.2-201ENST00000363365 126 ntBASIC0.47□□□□□ -2.33
SALL3Q9BXA9 RNU6-1233P-201ENST00000362922 102 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 RNU6-973P-201ENST00000364690 107 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 MIR124-2-201ENST00000385081 109 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 RNU6-1111P-201ENST00000391118 107 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 AC084368.1-201ENST00000620935 65 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 SNORD45.2-201ENST00000363552 72 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 RNU6-563P-201ENST00000364872 108 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 SNORA17.4-201ENST00000391287 132 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
SALL3Q9BXA9 snoU13.19-201ENST00000459148 104 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 MIR6759-201ENST00000638110 65 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 MIR655-201ENST00000362159 97 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 RNU6-1169P-201ENST00000363537 103 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 Y_RNA.519-201ENST00000384553 102 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 MIR548N-201ENST00000408742 75 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 RPL35AP4-201ENST00000412007 102 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 MIR103A1-201ENST00000362165 78 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 Y_RNA.223-201ENST00000364290 113 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 RNA5SP224-201ENST00000365069 126 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 Y_RNA.321-201ENST00000365149 102 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 MIR548Q-201ENST00000408404 100 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 Y_RNA.699-201ENST00000516803 93 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 MIR4280-201ENST00000582178 76 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
SALL3Q9BXA9 RNU6-127P-201ENST00000390897 107 ntBASIC0.42□□□□□ -2.34
SALL3Q9BXA9 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
SALL3Q9BXA9 MIR548AJ2-201ENST00000408539 92 ntBASIC0.41□□□□□ -2.34
SALL3Q9BXA9 AC244250.2-201ENST00000418731 148 ntBASIC0.41□□□□□ -2.34
SALL3Q9BXA9 MIR4636-201ENST00000582271 80 ntBASIC0.41□□□□□ -2.34
SALL3Q9BXA9 RNU6-815P-201ENST00000384080 113 ntBASIC0.4□□□□□ -2.34
SALL3Q9BXA9 RNU6-900P-201ENST00000384498 102 ntBASIC0.4□□□□□ -2.34
SALL3Q9BXA9 RNU6-455P-201ENST00000384681 107 ntBASIC0.4□□□□□ -2.34
SALL3Q9BXA9 MIR6854-201ENST00000614935 69 ntBASIC0.4□□□□□ -2.34
SALL3Q9BXA9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.4□□□□□ -2.35
SALL3Q9BXA9 RNU7-129P-201ENST00000516128 62 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 MIR5589-201ENST00000579442 60 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 snoR1.1-201ENST00000628177 80 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 MIR5683-201ENST00000636514 76 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 SNORA62.4-201ENST00000365504 151 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 SNORD115.2-201ENST00000391126 59 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 Z95118.1-201ENST00000421372 247 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 SNORD38.3-201ENST00000516599 73 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNA5SP169-201ENST00000517268 117 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNA5SP98-201ENST00000363158 137 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNU6-1133P-201ENST00000410963 100 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 U6.97-201ENST00000636904 101 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNA5SP26-201ENST00000362406 119 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 RNU6-79P-201ENST00000362511 107 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 RNU6-695P-201ENST00000391157 104 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 AC069113.3-201ENST00000521019 150 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 MIR6514-201ENST00000622549 70 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 Y_RNA.260-201ENST00000364628 101 ntBASIC0.36□□□□□ -2.35
SALL3Q9BXA9 RNU6-30P-201ENST00000384561 107 ntBASIC0.36□□□□□ -2.35
SALL3Q9BXA9 SNORA26.4-201ENST00000391188 123 ntBASIC0.36□□□□□ -2.35
SALL3Q9BXA9 RNU6-180P-201ENST00000516697 61 ntBASIC0.36□□□□□ -2.35
SALL3Q9BXA9 RNU6-836P-201ENST00000362920 107 ntBASIC0.35□□□□□ -2.35
SALL3Q9BXA9 RNU6-912P-201ENST00000363800 104 ntBASIC0.35□□□□□ -2.35
SALL3Q9BXA9 AC090616.4-201ENST00000448026 115 ntBASIC0.35□□□□□ -2.35
SALL3Q9BXA9 FTX_4.1-201ENST00000616291 147 ntBASIC0.35□□□□□ -2.35
SALL3Q9BXA9 Y_RNA.185-201ENST00000363894 100 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms