Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.55□□□□□ -2.5
NPAS1Q99742 RNU6-698P-201ENST00000363523 107 ntBASIC-0.55□□□□□ -2.5
NPAS1Q99742 RNU6-34P-201ENST00000364874 107 ntBASIC-0.55□□□□□ -2.5
NPAS1Q99742 MIR1302-4-201ENST00000408701 150 ntBASIC-0.55□□□□□ -2.5
NPAS1Q99742 MIR378F-201ENST00000578143 78 ntBASIC-0.55□□□□□ -2.5
NPAS1Q99742 RNU6-226P-201ENST00000363778 107 ntBASIC-0.56□□□□□ -2.5
NPAS1Q99742 RNA5SP331-201ENST00000364986 107 ntBASIC-0.56□□□□□ -2.5
NPAS1Q99742 RNU6-279P-201ENST00000391297 101 ntBASIC-0.56□□□□□ -2.5
NPAS1Q99742 MTND4LP1-201ENST00000446263 157 ntBASIC-0.56□□□□□ -2.5
NPAS1Q99742 RNU6-857P-201ENST00000515893 110 ntBASIC-0.56□□□□□ -2.5
NPAS1Q99742 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.56□□□□□ -2.5
NPAS1Q99742 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.56□□□□□ -2.5
NPAS1Q99742 MIR548V-201ENST00000584165 80 ntBASIC-0.56□□□□□ -2.5
NPAS1Q99742 RNU6-924P-201ENST00000362926 108 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 RNU6-668P-201ENST00000364180 107 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 SNORD114-17-201ENST00000364699 75 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 MIR630-201ENST00000384957 97 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 MIR154-201ENST00000385243 84 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 SNORD78.1-201ENST00000390866 65 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 RNA5SP225-201ENST00000410874 135 ntBASIC-0.57□□□□□ -2.5
NPAS1Q99742 RNA5SP215-201ENST00000363440 122 ntBASIC-0.58□□□□□ -2.5
NPAS1Q99742 RNU6-431P-201ENST00000383874 107 ntBASIC-0.58□□□□□ -2.5
NPAS1Q99742 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.58□□□□□ -2.5
NPAS1Q99742 U7.4-201ENST00000614961 63 ntBASIC-0.58□□□□□ -2.5
NPAS1Q99742 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.59□□□□□ -2.5
NPAS1Q99742 MIR147A-201ENST00000385079 72 ntBASIC-0.59□□□□□ -2.5
NPAS1Q99742 MIR601-201ENST00000385256 79 ntBASIC-0.59□□□□□ -2.5
NPAS1Q99742 U7.5-201ENST00000517224 61 ntBASIC-0.59□□□□□ -2.5
NPAS1Q99742 RNA5SP192-201ENST00000364404 120 ntBASIC-0.6□□□□□ -2.51
NPAS1Q99742 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.6□□□□□ -2.51
NPAS1Q99742 RNU6-411P-201ENST00000384451 107 ntBASIC-0.6□□□□□ -2.51
NPAS1Q99742 RNU7-88P-201ENST00000458752 63 ntBASIC-0.6□□□□□ -2.51
NPAS1Q99742 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.6□□□□□ -2.51
NPAS1Q99742 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 RNU6-458P-201ENST00000384179 107 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 RNU6-24P-201ENST00000384440 107 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 SNORD64-201ENST00000386683 67 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 SNORD83B-201ENST00000386745 93 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 SNORD113-2-201ENST00000391082 72 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 SNORA26.4-201ENST00000391188 123 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 SNORD19-201ENST00000391191 68 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 SNORD63.1-201ENST00000516178 80 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 MIR4499-201ENST00000584834 69 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 U6.58-201ENST00000613107 107 ntBASIC-0.61□□□□□ -2.51
NPAS1Q99742 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.62□□□□□ -2.51
NPAS1Q99742 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.62□□□□□ -2.51
NPAS1Q99742 RNU6-540P-201ENST00000384622 101 ntBASIC-0.62□□□□□ -2.51
NPAS1Q99742 AP002795.1-201ENST00000534879 84 ntBASIC-0.62□□□□□ -2.51
NPAS1Q99742 SNORD114-25-201ENST00000363742 72 ntBASIC-0.63□□□□□ -2.51
NPAS1Q99742 RNU6-895P-201ENST00000384125 103 ntBASIC-0.63□□□□□ -2.51
NPAS1Q99742 SNORA41B-201ENST00000384785 128 ntBASIC-0.63□□□□□ -2.51
NPAS1Q99742 RNU6-634P-201ENST00000459134 106 ntBASIC-0.63□□□□□ -2.51
NPAS1Q99742 RNU6-732P-201ENST00000516033 103 ntBASIC-0.63□□□□□ -2.51
NPAS1Q99742 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.63□□□□□ -2.51
NPAS1Q99742 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.63□□□□□ -2.51
NPAS1Q99742 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.64□□□□□ -2.51
NPAS1Q99742 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.64□□□□□ -2.51
NPAS1Q99742 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.64□□□□□ -2.51
NPAS1Q99742 MIR527-201ENST00000385244 85 ntBASIC-0.64□□□□□ -2.51
NPAS1Q99742 MIR889-201ENST00000401280 79 ntBASIC-0.64□□□□□ -2.51
NPAS1Q99742 SNORD115-33-201ENST00000363723 82 ntBASIC-0.65□□□□□ -2.51
NPAS1Q99742 RNU6-598P-201ENST00000364017 105 ntBASIC-0.65□□□□□ -2.51
NPAS1Q99742 SNORD116-16-201ENST00000384533 92 ntBASIC-0.66□□□□□ -2.52
NPAS1Q99742 RNA5SP180-201ENST00000516181 101 ntBASIC-0.66□□□□□ -2.52
NPAS1Q99742 MIR4723-201ENST00000585070 81 ntBASIC-0.66□□□□□ -2.52
NPAS1Q99742 MIR382-201ENST00000637119 76 ntBASIC-0.66□□□□□ -2.52
NPAS1Q99742 MIR1285-2-201ENST00000408311 88 ntBASIC-0.67□□□□□ -2.52
NPAS1Q99742 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.67□□□□□ -2.52
NPAS1Q99742 uc_338.19-201ENST00000616808 99 ntBASIC-0.67□□□□□ -2.52
NPAS1Q99742 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.68□□□□□ -2.52
NPAS1Q99742 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.68□□□□□ -2.52
NPAS1Q99742 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.68□□□□□ -2.52
NPAS1Q99742 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.68□□□□□ -2.52
NPAS1Q99742 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.68□□□□□ -2.52
NPAS1Q99742 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.68□□□□□ -2.52
NPAS1Q99742 U2.18-201ENST00000622185 84 ntBASIC-0.68□□□□□ -2.52
NPAS1Q99742 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.69□□□□□ -2.52
NPAS1Q99742 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
NPAS1Q99742 RNU6-696P-201ENST00000390834 107 ntBASIC-0.69□□□□□ -2.52
NPAS1Q99742 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.69□□□□□ -2.52
NPAS1Q99742 RNU6-663P-201ENST00000391105 106 ntBASIC-0.69□□□□□ -2.52
NPAS1Q99742 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.69□□□□□ -2.52
NPAS1Q99742 MIR1246-201ENST00000636535 73 ntBASIC-0.69□□□□□ -2.52
NPAS1Q99742 MIR365A-201ENST00000362260 87 ntBASIC-0.7□□□□□ -2.52
NPAS1Q99742 RNU6-542P-201ENST00000516405 103 ntBASIC-0.7□□□□□ -2.52
NPAS1Q99742 RNU6-630P-201ENST00000391258 106 ntBASIC-0.71□□□□□ -2.52
NPAS1Q99742 AL353691.2-201ENST00000443795 59 ntBASIC-0.71□□□□□ -2.52
NPAS1Q99742 RNA5SP26-201ENST00000362406 119 ntBASIC-0.72□□□□□ -2.52
NPAS1Q99742 SNORD1B-201ENST00000363091 84 ntBASIC-0.72□□□□□ -2.52
NPAS1Q99742 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.72□□□□□ -2.52
NPAS1Q99742 MIR8485-201ENST00000401372 91 ntBASIC-0.73□□□□□ -2.53
NPAS1Q99742 MIR4441-201ENST00000582623 100 ntBASIC-0.73□□□□□ -2.53
NPAS1Q99742 MIR5683-201ENST00000636514 76 ntBASIC-0.73□□□□□ -2.53
NPAS1Q99742 RNY4P27-201ENST00000363341 96 ntBASIC-0.74□□□□□ -2.53
NPAS1Q99742 RNU6-776P-201ENST00000364403 104 ntBASIC-0.74□□□□□ -2.53
NPAS1Q99742 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.74□□□□□ -2.53
NPAS1Q99742 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.74□□□□□ -2.53
NPAS1Q99742 MIR3165-201ENST00000579874 75 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms