Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.91□□□□□ -2.72
UFD1Q92890 MIR1297-201ENST00000637311 77 ntBASIC-1.91□□□□□ -2.72
UFD1Q92890 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.92□□□□□ -2.72
UFD1Q92890 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.92□□□□□ -2.72
UFD1Q92890 MIR548H1-201ENST00000408610 102 ntBASIC-1.92□□□□□ -2.72
UFD1Q92890 RNU6-168P-201ENST00000516189 101 ntBASIC-1.92□□□□□ -2.72
UFD1Q92890 U4.4-201ENST00000620626 117 ntBASIC-1.92□□□□□ -2.72
UFD1Q92890 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.93□□□□□ -2.72
UFD1Q92890 MTND4LP1-201ENST00000446263 157 ntBASIC-1.93□□□□□ -2.72
UFD1Q92890 MT-TR-201ENST00000387439 65 ntBASIC-1.94□□□□□ -2.72
UFD1Q92890 MIR4484-201ENST00000582855 83 ntBASIC-1.94□□□□□ -2.72
UFD1Q92890 RNU6-228P-201ENST00000362700 106 ntBASIC-1.95□□□□□ -2.72
UFD1Q92890 RNU6-400P-201ENST00000391173 106 ntBASIC-1.95□□□□□ -2.72
UFD1Q92890 RNU6-380P-201ENST00000410207 107 ntBASIC-1.95□□□□□ -2.72
UFD1Q92890 MIR548V-201ENST00000584165 80 ntBASIC-1.95□□□□□ -2.72
UFD1Q92890 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.96□□□□□ -2.72
UFD1Q92890 RNU6-755P-201ENST00000364400 103 ntBASIC-1.96□□□□□ -2.72
UFD1Q92890 MIR488-201ENST00000365739 83 ntBASIC-1.96□□□□□ -2.72
UFD1Q92890 RNU6-675P-201ENST00000384236 104 ntBASIC-1.96□□□□□ -2.72
UFD1Q92890 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.96□□□□□ -2.72
UFD1Q92890 RNU6-118P-201ENST00000516552 102 ntBASIC-1.96□□□□□ -2.72
UFD1Q92890 AC006160.2-201ENST00000637708 154 ntBASIC-1.96□□□□□ -2.72
UFD1Q92890 RNU6-598P-201ENST00000364017 105 ntBASIC-1.97□□□□□ -2.72
UFD1Q92890 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.97□□□□□ -2.72
UFD1Q92890 RNU6-630P-201ENST00000391258 106 ntBASIC-1.97□□□□□ -2.72
UFD1Q92890 AC018880.2-201ENST00000414265 201 ntBASIC-1.97□□□□□ -2.72
UFD1Q92890 MIR8053-201ENST00000613344 75 ntBASIC-1.98□□□□□ -2.73
UFD1Q92890 RNA5SP215-201ENST00000363440 122 ntBASIC-1.99□□□□□ -2.73
UFD1Q92890 RNU6-32P-201ENST00000383948 107 ntBASIC-1.99□□□□□ -2.73
UFD1Q92890 RNU6-13P-201ENST00000384248 107 ntBASIC-1.99□□□□□ -2.73
UFD1Q92890 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.99□□□□□ -2.73
UFD1Q92890 RNU6-12P-201ENST00000384604 107 ntBASIC-1.99□□□□□ -2.73
UFD1Q92890 RNU6-41P-201ENST00000384741 107 ntBASIC-1.99□□□□□ -2.73
UFD1Q92890 RNU6-980P-201ENST00000516925 103 ntBASIC-1.99□□□□□ -2.73
UFD1Q92890 RNU6-844P-201ENST00000517175 102 ntBASIC-1.99□□□□□ -2.73
UFD1Q92890 RNU6-640P-201ENST00000363693 105 ntBASIC-2□□□□□ -2.73
UFD1Q92890 RNU6-668P-201ENST00000364180 107 ntBASIC-2□□□□□ -2.73
UFD1Q92890 Y_RNA.678-201ENST00000516408 96 ntBASIC-2□□□□□ -2.73
UFD1Q92890 RNU6-608P-201ENST00000383927 104 ntBASIC-2.01□□□□□ -2.73
UFD1Q92890 MIR630-201ENST00000384957 97 ntBASIC-2.01□□□□□ -2.73
UFD1Q92890 AC108019.1-201ENST00000512540 175 ntBASIC-2.01□□□□□ -2.73
UFD1Q92890 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.01□□□□□ -2.73
UFD1Q92890 MIR664B-201ENST00000626756 61 ntBASIC-2.01□□□□□ -2.73
UFD1Q92890 MIR487B-201ENST00000385021 84 ntBASIC-2.02□□□□□ -2.73
UFD1Q92890 SNORD113-2-201ENST00000391082 72 ntBASIC-2.02□□□□□ -2.73
UFD1Q92890 MIR3910-1-201ENST00000580936 111 ntBASIC-2.02□□□□□ -2.73
UFD1Q92890 SNORD113.1-201ENST00000363280 73 ntBASIC-2.03□□□□□ -2.73
UFD1Q92890 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.03□□□□□ -2.73
UFD1Q92890 U2.18-201ENST00000622185 84 ntBASIC-2.03□□□□□ -2.73
UFD1Q92890 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.04□□□□□ -2.74
UFD1Q92890 MIR520D-201ENST00000385002 87 ntBASIC-2.04□□□□□ -2.74
UFD1Q92890 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.04□□□□□ -2.74
UFD1Q92890 RNU6-79P-201ENST00000362511 107 ntBASIC-2.05□□□□□ -2.74
UFD1Q92890 MIR4756-201ENST00000577874 78 ntBASIC-2.05□□□□□ -2.74
UFD1Q92890 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.06□□□□□ -2.74
UFD1Q92890 RNU6-315P-201ENST00000362666 107 ntBASIC-2.06□□□□□ -2.74
UFD1Q92890 RNA5SP173-201ENST00000364857 136 ntBASIC-2.06□□□□□ -2.74
UFD1Q92890 SNORD116-16-201ENST00000384533 92 ntBASIC-2.06□□□□□ -2.74
UFD1Q92890 SNORD54-201ENST00000459159 67 ntBASIC-2.06□□□□□ -2.74
UFD1Q92890 SNORD45A-201ENST00000384512 84 ntBASIC-2.07□□□□□ -2.74
UFD1Q92890 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.07□□□□□ -2.74
UFD1Q92890 SNORA63.4-201ENST00000362763 126 ntBASIC-2.08□□□□□ -2.74
UFD1Q92890 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.08□□□□□ -2.74
UFD1Q92890 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.08□□□□□ -2.74
UFD1Q92890 RNU6-147P-201ENST00000383983 107 ntBASIC-2.08□□□□□ -2.74
UFD1Q92890 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.08□□□□□ -2.74
UFD1Q92890 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.08□□□□□ -2.74
UFD1Q92890 MIR23C-201ENST00000579846 100 ntBASIC-2.08□□□□□ -2.74
UFD1Q92890 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.09□□□□□ -2.74
UFD1Q92890 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.09□□□□□ -2.74
UFD1Q92890 MIR548AA1-201ENST00000384971 97 ntBASIC-2.09□□□□□ -2.74
UFD1Q92890 SNORD113-1-201ENST00000365321 69 ntBASIC-2.1□□□□□ -2.75
UFD1Q92890 MIR3139-201ENST00000579145 76 ntBASIC-2.1□□□□□ -2.75
UFD1Q92890 MIR664A-201ENST00000626086 82 ntBASIC-2.1□□□□□ -2.75
UFD1Q92890 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.11□□□□□ -2.75
UFD1Q92890 MIR3170-201ENST00000582699 77 ntBASIC-2.11□□□□□ -2.75
UFD1Q92890 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.12□□□□□ -2.75
UFD1Q92890 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.12□□□□□ -2.75
UFD1Q92890 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.12□□□□□ -2.75
UFD1Q92890 IGLL4P-201ENST00000614590 133 ntBASIC-2.12□□□□□ -2.75
UFD1Q92890 RNU6-695P-201ENST00000391157 104 ntBASIC-2.13□□□□□ -2.75
UFD1Q92890 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.14□□□□□ -2.75
UFD1Q92890 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.14□□□□□ -2.75
UFD1Q92890 SNORA41B-201ENST00000384785 128 ntBASIC-2.14□□□□□ -2.75
UFD1Q92890 MIR5588-201ENST00000581890 63 ntBASIC-2.14□□□□□ -2.75
UFD1Q92890 RNA5SP93-201ENST00000362525 114 ntBASIC-2.15□□□□□ -2.75
UFD1Q92890 SNORD1B-201ENST00000363091 84 ntBASIC-2.15□□□□□ -2.75
UFD1Q92890 RNY1P1-201ENST00000364372 112 ntBASIC-2.15□□□□□ -2.75
UFD1Q92890 RNY4P7-201ENST00000364600 96 ntBASIC-2.15□□□□□ -2.75
UFD1Q92890 RNU6-247P-201ENST00000362636 107 ntBASIC-2.17□□□□□ -2.76
UFD1Q92890 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.17□□□□□ -2.76
UFD1Q92890 RNU6-215P-201ENST00000365169 102 ntBASIC-2.17□□□□□ -2.76
UFD1Q92890 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.17□□□□□ -2.76
UFD1Q92890 RNU6-919P-201ENST00000516731 104 ntBASIC-2.17□□□□□ -2.76
UFD1Q92890 RNA5SP405-201ENST00000363059 114 ntBASIC-2.18□□□□□ -2.76
UFD1Q92890 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.18□□□□□ -2.76
UFD1Q92890 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.19□□□□□ -2.76
UFD1Q92890 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.19□□□□□ -2.76
UFD1Q92890 RNU6-979P-201ENST00000383896 107 ntBASIC-2.19□□□□□ -2.76
UFD1Q92890 MT-TM-201ENST00000387377 68 ntBASIC-2.19□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms