Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SNORD63.1-201ENST00000516178 80 ntBASIC0.43□□□□□ -2.34
SH3RF3Q8TEJ3 AC023932.2-201ENST00000603176 175 ntBASIC0.43□□□□□ -2.34
SH3RF3Q8TEJ3 AC090625.1-201ENST00000357130 210 ntBASIC0.42□□□□□ -2.34
SH3RF3Q8TEJ3 MIR548H4-201ENST00000408689 111 ntBASIC0.42□□□□□ -2.34
SH3RF3Q8TEJ3 snoU13.19-201ENST00000459148 104 ntBASIC0.42□□□□□ -2.34
SH3RF3Q8TEJ3 AC069113.3-201ENST00000521019 150 ntBASIC0.42□□□□□ -2.34
SH3RF3Q8TEJ3 MIR6514-201ENST00000622549 70 ntBASIC0.42□□□□□ -2.34
SH3RF3Q8TEJ3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
SH3RF3Q8TEJ3 RNU6-455P-201ENST00000384681 107 ntBASIC0.41□□□□□ -2.34
SH3RF3Q8TEJ3 SNORD56B-201ENST00000384713 71 ntBASIC0.41□□□□□ -2.34
SH3RF3Q8TEJ3 MIR520D-201ENST00000385002 87 ntBASIC0.41□□□□□ -2.34
SH3RF3Q8TEJ3 SNORD19-201ENST00000391191 68 ntBASIC0.41□□□□□ -2.34
SH3RF3Q8TEJ3 AC114755.3-201ENST00000481111 251 ntBASIC0.41□□□□□ -2.34
SH3RF3Q8TEJ3 CR383656.4-201ENST00000546909 122 ntBASIC0.41□□□□□ -2.34
SH3RF3Q8TEJ3 MIR5589-201ENST00000579442 60 ntBASIC0.41□□□□□ -2.34
SH3RF3Q8TEJ3 RNU6-742P-201ENST00000365289 107 ntBASIC0.4□□□□□ -2.35
SH3RF3Q8TEJ3 RNU6-1133P-201ENST00000410963 100 ntBASIC0.4□□□□□ -2.35
SH3RF3Q8TEJ3 RNU6-732P-201ENST00000516033 103 ntBASIC0.4□□□□□ -2.35
SH3RF3Q8TEJ3 MIR655-201ENST00000362159 97 ntBASIC0.39□□□□□ -2.35
SH3RF3Q8TEJ3 RNU6-30P-201ENST00000384561 107 ntBASIC0.39□□□□□ -2.35
SH3RF3Q8TEJ3 SNORD63.2-201ENST00000516303 64 ntBASIC0.39□□□□□ -2.35
SH3RF3Q8TEJ3 RNA5SP163-201ENST00000410304 99 ntBASIC0.38□□□□□ -2.35
SH3RF3Q8TEJ3 AC244250.2-201ENST00000418731 148 ntBASIC0.38□□□□□ -2.35
SH3RF3Q8TEJ3 RNU6-1238P-201ENST00000517215 102 ntBASIC0.38□□□□□ -2.35
SH3RF3Q8TEJ3 AC104408.1-201ENST00000605241 170 ntBASIC0.38□□□□□ -2.35
SH3RF3Q8TEJ3 MIR148A-201ENST00000362215 68 ntBASIC0.37□□□□□ -2.35
SH3RF3Q8TEJ3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.37□□□□□ -2.35
SH3RF3Q8TEJ3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.37□□□□□ -2.35
SH3RF3Q8TEJ3 MIR4802-201ENST00000581881 80 ntBASIC0.37□□□□□ -2.35
SH3RF3Q8TEJ3 AP002795.1-201ENST00000534879 84 ntBASIC0.36□□□□□ -2.35
SH3RF3Q8TEJ3 MIR6854-201ENST00000614935 69 ntBASIC0.36□□□□□ -2.35
SH3RF3Q8TEJ3 MIR124-2-201ENST00000385081 109 ntBASIC0.35□□□□□ -2.35
SH3RF3Q8TEJ3 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
SH3RF3Q8TEJ3 MIR4280-201ENST00000582178 76 ntBASIC0.35□□□□□ -2.35
SH3RF3Q8TEJ3 RNU6-1204P-201ENST00000363948 107 ntBASIC0.34□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-724P-201ENST00000390958 105 ntBASIC0.34□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-1008P-201ENST00000384160 104 ntBASIC0.33□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-59P-201ENST00000384787 107 ntBASIC0.33□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-530P-201ENST00000391180 107 ntBASIC0.32□□□□□ -2.36
SH3RF3Q8TEJ3 MIR892B-201ENST00000401279 77 ntBASIC0.32□□□□□ -2.36
SH3RF3Q8TEJ3 RNU7-165P-201ENST00000458864 60 ntBASIC0.32□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-822P-201ENST00000362707 106 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 SNORD45.2-201ENST00000363552 72 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 RNA5SP331-201ENST00000364986 107 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 MIR593-201ENST00000384856 100 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-1111P-201ENST00000391118 107 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-721P-201ENST00000410155 105 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 MIR1468-201ENST00000410600 86 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 MIR4315-1-201ENST00000636800 73 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 MIR4315-2-201ENST00000640925 73 ntBASIC0.3□□□□□ -2.36
SH3RF3Q8TEJ3 Y_RNA.185-201ENST00000363894 100 ntBASIC0.29□□□□□ -2.36
SH3RF3Q8TEJ3 Y_RNA.321-201ENST00000365149 102 ntBASIC0.29□□□□□ -2.36
SH3RF3Q8TEJ3 MIR145-201ENST00000384967 88 ntBASIC0.29□□□□□ -2.36
SH3RF3Q8TEJ3 MIR4743-201ENST00000584576 69 ntBASIC0.29□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-1233P-201ENST00000362922 102 ntBASIC0.28□□□□□ -2.36
SH3RF3Q8TEJ3 Z95118.1-201ENST00000421372 247 ntBASIC0.28□□□□□ -2.36
SH3RF3Q8TEJ3 RNU6-608P-201ENST00000383927 104 ntBASIC0.27□□□□□ -2.37
SH3RF3Q8TEJ3 RNA5SP25-201ENST00000410815 110 ntBASIC0.27□□□□□ -2.37
SH3RF3Q8TEJ3 SNORA27.2-201ENST00000363365 126 ntBASIC0.26□□□□□ -2.37
SH3RF3Q8TEJ3 MIR548Q-201ENST00000408404 100 ntBASIC0.26□□□□□ -2.37
SH3RF3Q8TEJ3 MIR5190-201ENST00000581537 80 ntBASIC0.26□□□□□ -2.37
SH3RF3Q8TEJ3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
SH3RF3Q8TEJ3 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
SH3RF3Q8TEJ3 RNA5SP214-201ENST00000363378 118 ntBASIC0.25□□□□□ -2.37
SH3RF3Q8TEJ3 RNA5SP368-201ENST00000364298 116 ntBASIC0.25□□□□□ -2.37
SH3RF3Q8TEJ3 RNU6-901P-201ENST00000384593 106 ntBASIC0.25□□□□□ -2.37
SH3RF3Q8TEJ3 MIR610-201ENST00000385139 96 ntBASIC0.25□□□□□ -2.37
SH3RF3Q8TEJ3 SNORD38.3-201ENST00000516599 73 ntBASIC0.25□□□□□ -2.37
SH3RF3Q8TEJ3 MIR6851-201ENST00000617060 67 ntBASIC0.25□□□□□ -2.37
SH3RF3Q8TEJ3 SNORD114-9-201ENST00000364370 72 ntBASIC0.24□□□□□ -2.37
SH3RF3Q8TEJ3 AL445193.1-201ENST00000441183 141 ntBASIC0.24□□□□□ -2.37
SH3RF3Q8TEJ3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.24□□□□□ -2.37
SH3RF3Q8TEJ3 RNU6-758P-201ENST00000516292 89 ntBASIC0.24□□□□□ -2.37
SH3RF3Q8TEJ3 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
SH3RF3Q8TEJ3 RNU7-159P-201ENST00000459284 62 ntBASIC0.23□□□□□ -2.37
SH3RF3Q8TEJ3 Y_RNA.699-201ENST00000516803 93 ntBASIC0.23□□□□□ -2.37
SH3RF3Q8TEJ3 AL590491.3-201ENST00000610731 82 ntBASIC0.23□□□□□ -2.37
SH3RF3Q8TEJ3 U6.103-201ENST00000637085 61 ntBASIC0.23□□□□□ -2.37
SH3RF3Q8TEJ3 RNU6-361P-201ENST00000364454 107 ntBASIC0.22□□□□□ -2.37
SH3RF3Q8TEJ3 SNORA26.4-201ENST00000391188 123 ntBASIC0.22□□□□□ -2.37
SH3RF3Q8TEJ3 RNY3P8-201ENST00000411366 126 ntBASIC0.22□□□□□ -2.37
SH3RF3Q8TEJ3 SNORD114-5-201ENST00000362928 70 ntBASIC0.21□□□□□ -2.38
SH3RF3Q8TEJ3 MIR4426-201ENST00000640330 63 ntBASIC0.21□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD114-15-201ENST00000364687 72 ntBASIC0.2□□□□□ -2.38
SH3RF3Q8TEJ3 RNU6-929P-201ENST00000384429 107 ntBASIC0.2□□□□□ -2.38
SH3RF3Q8TEJ3 RNU6-1326P-201ENST00000391262 107 ntBASIC0.2□□□□□ -2.38
SH3RF3Q8TEJ3 IGLVI-20-201ENST00000519296 130 ntBASIC0.2□□□□□ -2.38
SH3RF3Q8TEJ3 MIR5683-201ENST00000636514 76 ntBASIC0.2□□□□□ -2.38
SH3RF3Q8TEJ3 Y_RNA.345-201ENST00000365384 92 ntBASIC0.19□□□□□ -2.38
SH3RF3Q8TEJ3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD115-33-201ENST00000363723 82 ntBASIC0.18□□□□□ -2.38
SH3RF3Q8TEJ3 Y_RNA.206-201ENST00000364136 102 ntBASIC0.18□□□□□ -2.38
SH3RF3Q8TEJ3 RNU6-1047P-201ENST00000364418 107 ntBASIC0.18□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD49B-201ENST00000365172 72 ntBASIC0.18□□□□□ -2.38
SH3RF3Q8TEJ3 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
SH3RF3Q8TEJ3 MIR202-201ENST00000362219 110 ntBASIC0.17□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD74.6-201ENST00000364796 70 ntBASIC0.17□□□□□ -2.38
SH3RF3Q8TEJ3 RNU6-46P-201ENST00000383860 107 ntBASIC0.17□□□□□ -2.38
SH3RF3Q8TEJ3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms