Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AP000533.3-201ENST00000447704 118 ntBASIC-0.74□□□□□ -2.53
CLRN3Q8NCR9 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.75□□□□□ -2.53
CLRN3Q8NCR9 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.75□□□□□ -2.53
CLRN3Q8NCR9 MIR548AG1-201ENST00000579932 66 ntBASIC-0.75□□□□□ -2.53
CLRN3Q8NCR9 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.76□□□□□ -2.53
CLRN3Q8NCR9 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.77□□□□□ -2.53
CLRN3Q8NCR9 RNU6-458P-201ENST00000384179 107 ntBASIC-0.77□□□□□ -2.53
CLRN3Q8NCR9 U6.58-201ENST00000613107 107 ntBASIC-0.77□□□□□ -2.53
CLRN3Q8NCR9 U6.111-201ENST00000636093 83 ntBASIC-0.77□□□□□ -2.53
CLRN3Q8NCR9 RNA5SP368-201ENST00000364298 116 ntBASIC-0.78□□□□□ -2.53
CLRN3Q8NCR9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.78□□□□□ -2.53
CLRN3Q8NCR9 RNA5SP25-201ENST00000410815 110 ntBASIC-0.79□□□□□ -2.54
CLRN3Q8NCR9 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.79□□□□□ -2.54
CLRN3Q8NCR9 RNU6-246P-201ENST00000384702 107 ntBASIC-0.8□□□□□ -2.54
CLRN3Q8NCR9 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.81□□□□□ -2.54
CLRN3Q8NCR9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.82□□□□□ -2.54
CLRN3Q8NCR9 SNORD116-16-201ENST00000384533 92 ntBASIC-0.82□□□□□ -2.54
CLRN3Q8NCR9 RNU6-92P-201ENST00000605893 104 ntBASIC-0.82□□□□□ -2.54
CLRN3Q8NCR9 AC005520.4-201ENST00000604337 90 ntBASIC-0.83□□□□□ -2.54
CLRN3Q8NCR9 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.84□□□□□ -2.54
CLRN3Q8NCR9 U7.5-201ENST00000517224 61 ntBASIC-0.84□□□□□ -2.54
CLRN3Q8NCR9 SNORD114-15-201ENST00000364687 72 ntBASIC-0.85□□□□□ -2.55
CLRN3Q8NCR9 RNU4-63P-201ENST00000411313 118 ntBASIC-0.85□□□□□ -2.55
CLRN3Q8NCR9 AC103706.3-201ENST00000636297 85 ntBASIC-0.85□□□□□ -2.55
CLRN3Q8NCR9 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.86□□□□□ -2.55
CLRN3Q8NCR9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.87□□□□□ -2.55
CLRN3Q8NCR9 MT-TQ-201ENST00000387372 72 ntBASIC-0.87□□□□□ -2.55
CLRN3Q8NCR9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
CLRN3Q8NCR9 RNU6-696P-201ENST00000390834 107 ntBASIC-0.87□□□□□ -2.55
CLRN3Q8NCR9 RNU7-88P-201ENST00000458752 63 ntBASIC-0.87□□□□□ -2.55
CLRN3Q8NCR9 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.87□□□□□ -2.55
CLRN3Q8NCR9 RNU6-800P-201ENST00000384473 103 ntBASIC-0.88□□□□□ -2.55
CLRN3Q8NCR9 SNORA26.4-201ENST00000391188 123 ntBASIC-0.88□□□□□ -2.55
CLRN3Q8NCR9 AC114801.3-201ENST00000510231 177 ntBASIC-0.88□□□□□ -2.55
CLRN3Q8NCR9 RNU6-732P-201ENST00000516033 103 ntBASIC-0.88□□□□□ -2.55
CLRN3Q8NCR9 MIR4511-201ENST00000582784 87 ntBASIC-0.88□□□□□ -2.55
CLRN3Q8NCR9 MIR6086-201ENST00000638065 55 ntBASIC-0.88□□□□□ -2.55
CLRN3Q8NCR9 SNORD115-33-201ENST00000363723 82 ntBASIC-0.89□□□□□ -2.55
CLRN3Q8NCR9 MIR4436A-201ENST00000585278 85 ntBASIC-0.89□□□□□ -2.55
CLRN3Q8NCR9 SNORA41B-201ENST00000384785 128 ntBASIC-0.9□□□□□ -2.55
CLRN3Q8NCR9 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.9□□□□□ -2.55
CLRN3Q8NCR9 MIR3681-201ENST00000580089 72 ntBASIC-0.9□□□□□ -2.55
CLRN3Q8NCR9 SNORA25.5-201ENST00000363782 126 ntBASIC-0.93□□□□□ -2.56
CLRN3Q8NCR9 snoU13.19-201ENST00000459148 104 ntBASIC-0.93□□□□□ -2.56
CLRN3Q8NCR9 AL353691.2-201ENST00000443795 59 ntBASIC-0.94□□□□□ -2.56
CLRN3Q8NCR9 SNORD63.1-201ENST00000516178 80 ntBASIC-0.94□□□□□ -2.56
CLRN3Q8NCR9 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.95□□□□□ -2.56
CLRN3Q8NCR9 SNORD60.1-201ENST00000362451 73 ntBASIC-0.97□□□□□ -2.56
CLRN3Q8NCR9 RNU6-598P-201ENST00000364017 105 ntBASIC-0.98□□□□□ -2.57
CLRN3Q8NCR9 SNORD57-201ENST00000448188 72 ntBASIC-0.99□□□□□ -2.57
CLRN3Q8NCR9 Y_RNA.178-201ENST00000363832 102 ntBASIC-1□□□□□ -2.57
CLRN3Q8NCR9 RNU6-122P-201ENST00000516818 107 ntBASIC-1□□□□□ -2.57
CLRN3Q8NCR9 MIR548AX-201ENST00000580117 73 ntBASIC-1□□□□□ -2.57
CLRN3Q8NCR9 SNORD1B-201ENST00000363091 84 ntBASIC-1.01□□□□□ -2.57
CLRN3Q8NCR9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.01□□□□□ -2.57
CLRN3Q8NCR9 RNU6-940P-201ENST00000363433 104 ntBASIC-1.02□□□□□ -2.57
CLRN3Q8NCR9 MIR548AA1-201ENST00000384971 97 ntBASIC-1.02□□□□□ -2.57
CLRN3Q8NCR9 MIR147A-201ENST00000385079 72 ntBASIC-1.02□□□□□ -2.57
CLRN3Q8NCR9 MIR548Q-201ENST00000408404 100 ntBASIC-1.02□□□□□ -2.57
CLRN3Q8NCR9 RNU6-471P-201ENST00000383944 106 ntBASIC-1.03□□□□□ -2.57
CLRN3Q8NCR9 RNU6-30P-201ENST00000384561 107 ntBASIC-1.03□□□□□ -2.57
CLRN3Q8NCR9 U2.18-201ENST00000622185 84 ntBASIC-1.04□□□□□ -2.58
CLRN3Q8NCR9 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.05□□□□□ -2.58
CLRN3Q8NCR9 MIR4490-201ENST00000582647 84 ntBASIC-1.05□□□□□ -2.58
CLRN3Q8NCR9 SNORD19-201ENST00000391191 68 ntBASIC-1.06□□□□□ -2.58
CLRN3Q8NCR9 RNA5SP67-201ENST00000516422 131 ntBASIC-1.06□□□□□ -2.58
CLRN3Q8NCR9 MIR5683-201ENST00000636514 76 ntBASIC-1.06□□□□□ -2.58
CLRN3Q8NCR9 RNU6-995P-201ENST00000391244 107 ntBASIC-1.07□□□□□ -2.58
CLRN3Q8NCR9 RNU6-172P-201ENST00000411000 93 ntBASIC-1.07□□□□□ -2.58
CLRN3Q8NCR9 RNA5SP476-201ENST00000516613 103 ntBASIC-1.07□□□□□ -2.58
CLRN3Q8NCR9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.07□□□□□ -2.58
CLRN3Q8NCR9 RNU6-431P-201ENST00000383874 107 ntBASIC-1.09□□□□□ -2.58
CLRN3Q8NCR9 SNORD114-25-201ENST00000363742 72 ntBASIC-1.1□□□□□ -2.59
CLRN3Q8NCR9 RNU6-590P-201ENST00000365039 107 ntBASIC-1.1□□□□□ -2.59
CLRN3Q8NCR9 SNORD64-201ENST00000386683 67 ntBASIC-1.1□□□□□ -2.59
CLRN3Q8NCR9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
CLRN3Q8NCR9 AC110620.1-201ENST00000416042 228 ntBASIC-1.1□□□□□ -2.59
CLRN3Q8NCR9 HAR1A.1-201ENST00000459583 118 ntBASIC-1.1□□□□□ -2.59
CLRN3Q8NCR9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.1□□□□□ -2.59
CLRN3Q8NCR9 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.11□□□□□ -2.59
CLRN3Q8NCR9 snoU83B.1-201ENST00000517136 88 ntBASIC-1.12□□□□□ -2.59
CLRN3Q8NCR9 MIR7110-201ENST00000612638 86 ntBASIC-1.12□□□□□ -2.59
CLRN3Q8NCR9 RNU6-669P-201ENST00000365575 107 ntBASIC-1.13□□□□□ -2.59
CLRN3Q8NCR9 MIR196A1-201ENST00000388006 70 ntBASIC-1.13□□□□□ -2.59
CLRN3Q8NCR9 RNU7-119P-201ENST00000459279 63 ntBASIC-1.13□□□□□ -2.59
CLRN3Q8NCR9 RNU6-231P-201ENST00000517122 103 ntBASIC-1.13□□□□□ -2.59
CLRN3Q8NCR9 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.14□□□□□ -2.59
CLRN3Q8NCR9 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.14□□□□□ -2.59
CLRN3Q8NCR9 MIR507-201ENST00000385234 94 ntBASIC-1.16□□□□□ -2.6
CLRN3Q8NCR9 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.16□□□□□ -2.6
CLRN3Q8NCR9 RNU7-151P-201ENST00000516930 53 ntBASIC-1.16□□□□□ -2.6
CLRN3Q8NCR9 MIR466-201ENST00000580653 84 ntBASIC-1.16□□□□□ -2.6
CLRN3Q8NCR9 MIR382-201ENST00000637119 76 ntBASIC-1.16□□□□□ -2.6
CLRN3Q8NCR9 AP002795.1-201ENST00000534879 84 ntBASIC-1.17□□□□□ -2.6
CLRN3Q8NCR9 SNORD83B-201ENST00000386745 93 ntBASIC-1.18□□□□□ -2.6
CLRN3Q8NCR9 RNY1P9-201ENST00000532431 109 ntBASIC-1.18□□□□□ -2.6
CLRN3Q8NCR9 MIR3938-201ENST00000582157 103 ntBASIC-1.18□□□□□ -2.6
CLRN3Q8NCR9 MIR6738-201ENST00000619620 64 ntBASIC-1.18□□□□□ -2.6
CLRN3Q8NCR9 RNU7-160P-201ENST00000516660 62 ntBASIC-1.19□□□□□ -2.6
CLRN3Q8NCR9 MIR3170-201ENST00000582699 77 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 1246 ms