Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 MIR1246-201ENST00000636535 73 ntBASIC-0.83□□□□□ -2.54
PDLIM3Q53GG5 RNU6-924P-201ENST00000362926 108 ntBASIC-0.84□□□□□ -2.54
PDLIM3Q53GG5 SNORD45A-201ENST00000384512 84 ntBASIC-0.84□□□□□ -2.54
PDLIM3Q53GG5 SNORD115-22-201ENST00000364456 82 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 MIR548AG1-201ENST00000579932 66 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 MIR4499-201ENST00000584834 69 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 uc_338.19-201ENST00000616808 99 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 MIR382-201ENST00000637119 76 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 MTND4LP1-201ENST00000446263 157 ntBASIC-0.86□□□□□ -2.55
PDLIM3Q53GG5 RNU7-88P-201ENST00000458752 63 ntBASIC-0.86□□□□□ -2.55
PDLIM3Q53GG5 RNU6-732P-201ENST00000516033 103 ntBASIC-0.86□□□□□ -2.55
PDLIM3Q53GG5 RNU6-70P-201ENST00000516438 60 ntBASIC-0.86□□□□□ -2.55
PDLIM3Q53GG5 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.87□□□□□ -2.55
PDLIM3Q53GG5 RNU6-820P-201ENST00000384273 107 ntBASIC-0.87□□□□□ -2.55
PDLIM3Q53GG5 MIR8053-201ENST00000613344 75 ntBASIC-0.87□□□□□ -2.55
PDLIM3Q53GG5 SNORD113.1-201ENST00000363280 73 ntBASIC-0.88□□□□□ -2.55
PDLIM3Q53GG5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.88□□□□□ -2.55
PDLIM3Q53GG5 RNU6-668P-201ENST00000364180 107 ntBASIC-0.89□□□□□ -2.55
PDLIM3Q53GG5 RNY4-201ENST00000516507 96 ntBASIC-0.89□□□□□ -2.55
PDLIM3Q53GG5 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.9□□□□□ -2.55
PDLIM3Q53GG5 SNORD73B-201ENST00000364394 72 ntBASIC-0.9□□□□□ -2.55
PDLIM3Q53GG5 MIR154-201ENST00000385243 84 ntBASIC-0.9□□□□□ -2.55
PDLIM3Q53GG5 MIR4666B-201ENST00000578142 81 ntBASIC-0.9□□□□□ -2.55
PDLIM3Q53GG5 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.91□□□□□ -2.56
PDLIM3Q53GG5 RNU7-174P-201ENST00000516248 59 ntBASIC-0.91□□□□□ -2.56
PDLIM3Q53GG5 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.91□□□□□ -2.56
PDLIM3Q53GG5 RNU6-787P-201ENST00000384032 107 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 MIR496-201ENST00000385226 102 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 snoU83B.1-201ENST00000517136 88 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 U7.5-201ENST00000517224 61 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.93□□□□□ -2.56
PDLIM3Q53GG5 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.93□□□□□ -2.56
PDLIM3Q53GG5 MIR630-201ENST00000384957 97 ntBASIC-0.93□□□□□ -2.56
PDLIM3Q53GG5 MIR527-201ENST00000385244 85 ntBASIC-0.93□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.94□□□□□ -2.56
PDLIM3Q53GG5 RNU6-573P-201ENST00000383938 106 ntBASIC-0.94□□□□□ -2.56
PDLIM3Q53GG5 RNU6-895P-201ENST00000384125 103 ntBASIC-0.94□□□□□ -2.56
PDLIM3Q53GG5 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.94□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.95□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.95□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.95□□□□□ -2.56
PDLIM3Q53GG5 MIR3134-201ENST00000579433 74 ntBASIC-0.95□□□□□ -2.56
PDLIM3Q53GG5 SNORD63.1-201ENST00000516178 80 ntBASIC-0.96□□□□□ -2.56
PDLIM3Q53GG5 RNA5SP173-201ENST00000364857 136 ntBASIC-0.97□□□□□ -2.56
PDLIM3Q53GG5 RNU6-246P-201ENST00000384702 107 ntBASIC-0.97□□□□□ -2.56
PDLIM3Q53GG5 SNORA26.2-201ENST00000390922 122 ntBASIC-0.97□□□□□ -2.56
PDLIM3Q53GG5 RNU6-698P-201ENST00000363523 107 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 RNU6-34P-201ENST00000364874 107 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 RNU6-458P-201ENST00000384179 107 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 RNU6-587P-201ENST00000391282 106 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 U6.58-201ENST00000613107 107 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 U4.4-201ENST00000620626 117 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.99□□□□□ -2.57
PDLIM3Q53GG5 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.99□□□□□ -2.57
PDLIM3Q53GG5 RNY4P29-201ENST00000410801 97 ntBASIC-0.99□□□□□ -2.57
PDLIM3Q53GG5 RNU7-134P-201ENST00000458997 64 ntBASIC-0.99□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.388-201ENST00000383919 113 ntBASIC-1□□□□□ -2.57
PDLIM3Q53GG5 SNORA26.4-201ENST00000391188 123 ntBASIC-1□□□□□ -2.57
PDLIM3Q53GG5 SNORD115-33-201ENST00000363723 82 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 SNORD115-31-201ENST00000365318 82 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 RNA5SP215-201ENST00000363440 122 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 MIR548Q-201ENST00000408404 100 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 MIR4306-201ENST00000583390 91 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.03□□□□□ -2.57
PDLIM3Q53GG5 SNORD113-2-201ENST00000391082 72 ntBASIC-1.03□□□□□ -2.57
PDLIM3Q53GG5 U7.4-201ENST00000614961 63 ntBASIC-1.03□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.04□□□□□ -2.58
PDLIM3Q53GG5 MIR6818-201ENST00000621576 65 ntBASIC-1.04□□□□□ -2.58
PDLIM3Q53GG5 MIR429-201ENST00000362106 83 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 MIR29B1-201ENST00000385015 81 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 MIR507-201ENST00000385234 94 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 MIR1255A-201ENST00000408338 113 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 AL353691.2-201ENST00000443795 59 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 RNU6-706P-201ENST00000517229 104 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 MIR3202-2-201ENST00000635980 79 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 RNA5SP26-201ENST00000362406 119 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 RNU6-411P-201ENST00000384451 107 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 SNORD116-24-201ENST00000384549 92 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 RNU6-687P-201ENST00000516443 89 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 RNA5SP93-201ENST00000362525 114 ntBASIC-1.07□□□□□ -2.58
PDLIM3Q53GG5 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.07□□□□□ -2.58
PDLIM3Q53GG5 RNU6-228P-201ENST00000362700 106 ntBASIC-1.08□□□□□ -2.58
PDLIM3Q53GG5 MIR8485-201ENST00000401372 91 ntBASIC-1.08□□□□□ -2.58
PDLIM3Q53GG5 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.08□□□□□ -2.58
PDLIM3Q53GG5 AP002795.1-201ENST00000534879 84 ntBASIC-1.08□□□□□ -2.58
PDLIM3Q53GG5 SNORD19-201ENST00000391191 68 ntBASIC-1.09□□□□□ -2.58
PDLIM3Q53GG5 MIR889-201ENST00000401280 79 ntBASIC-1.09□□□□□ -2.58
PDLIM3Q53GG5 RNU6-226P-201ENST00000363778 107 ntBASIC-1.1□□□□□ -2.59
PDLIM3Q53GG5 RNU6-576P-201ENST00000390854 102 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms