Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 MIR1246-201ENST00000636535 73 ntBASIC-0.83□□□□□ -2.54
PDLIM3Q53GG5 RNU6-924P-201ENST00000362926 108 ntBASIC-0.84□□□□□ -2.54
PDLIM3Q53GG5 SNORD45A-201ENST00000384512 84 ntBASIC-0.84□□□□□ -2.54
PDLIM3Q53GG5 SNORD115-22-201ENST00000364456 82 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 MIR548AG1-201ENST00000579932 66 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 MIR4499-201ENST00000584834 69 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 uc_338.19-201ENST00000616808 99 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 MIR382-201ENST00000637119 76 ntBASIC-0.85□□□□□ -2.55
PDLIM3Q53GG5 MTND4LP1-201ENST00000446263 157 ntBASIC-0.86□□□□□ -2.55
PDLIM3Q53GG5 RNU7-88P-201ENST00000458752 63 ntBASIC-0.86□□□□□ -2.55
PDLIM3Q53GG5 RNU6-732P-201ENST00000516033 103 ntBASIC-0.86□□□□□ -2.55
PDLIM3Q53GG5 RNU6-70P-201ENST00000516438 60 ntBASIC-0.86□□□□□ -2.55
PDLIM3Q53GG5 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.87□□□□□ -2.55
PDLIM3Q53GG5 RNU6-820P-201ENST00000384273 107 ntBASIC-0.87□□□□□ -2.55
PDLIM3Q53GG5 MIR8053-201ENST00000613344 75 ntBASIC-0.87□□□□□ -2.55
PDLIM3Q53GG5 SNORD113.1-201ENST00000363280 73 ntBASIC-0.88□□□□□ -2.55
PDLIM3Q53GG5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.88□□□□□ -2.55
PDLIM3Q53GG5 RNU6-668P-201ENST00000364180 107 ntBASIC-0.89□□□□□ -2.55
PDLIM3Q53GG5 RNY4-201ENST00000516507 96 ntBASIC-0.89□□□□□ -2.55
PDLIM3Q53GG5 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.9□□□□□ -2.55
PDLIM3Q53GG5 SNORD73B-201ENST00000364394 72 ntBASIC-0.9□□□□□ -2.55
PDLIM3Q53GG5 MIR154-201ENST00000385243 84 ntBASIC-0.9□□□□□ -2.55
PDLIM3Q53GG5 MIR4666B-201ENST00000578142 81 ntBASIC-0.9□□□□□ -2.55
PDLIM3Q53GG5 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.91□□□□□ -2.56
PDLIM3Q53GG5 RNU7-174P-201ENST00000516248 59 ntBASIC-0.91□□□□□ -2.56
PDLIM3Q53GG5 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.91□□□□□ -2.56
PDLIM3Q53GG5 RNU6-787P-201ENST00000384032 107 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 MIR496-201ENST00000385226 102 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 snoU83B.1-201ENST00000517136 88 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 U7.5-201ENST00000517224 61 ntBASIC-0.92□□□□□ -2.56
PDLIM3Q53GG5 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.93□□□□□ -2.56
PDLIM3Q53GG5 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.93□□□□□ -2.56
PDLIM3Q53GG5 MIR630-201ENST00000384957 97 ntBASIC-0.93□□□□□ -2.56
PDLIM3Q53GG5 MIR527-201ENST00000385244 85 ntBASIC-0.93□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.94□□□□□ -2.56
PDLIM3Q53GG5 RNU6-573P-201ENST00000383938 106 ntBASIC-0.94□□□□□ -2.56
PDLIM3Q53GG5 RNU6-895P-201ENST00000384125 103 ntBASIC-0.94□□□□□ -2.56
PDLIM3Q53GG5 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.94□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.95□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.95□□□□□ -2.56
PDLIM3Q53GG5 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.95□□□□□ -2.56
PDLIM3Q53GG5 MIR3134-201ENST00000579433 74 ntBASIC-0.95□□□□□ -2.56
PDLIM3Q53GG5 SNORD63.1-201ENST00000516178 80 ntBASIC-0.96□□□□□ -2.56
PDLIM3Q53GG5 RNA5SP173-201ENST00000364857 136 ntBASIC-0.97□□□□□ -2.56
PDLIM3Q53GG5 RNU6-246P-201ENST00000384702 107 ntBASIC-0.97□□□□□ -2.56
PDLIM3Q53GG5 SNORA26.2-201ENST00000390922 122 ntBASIC-0.97□□□□□ -2.56
PDLIM3Q53GG5 RNU6-698P-201ENST00000363523 107 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 RNU6-34P-201ENST00000364874 107 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 RNU6-458P-201ENST00000384179 107 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 RNU6-587P-201ENST00000391282 106 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 U6.58-201ENST00000613107 107 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 U4.4-201ENST00000620626 117 ntBASIC-0.98□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.99□□□□□ -2.57
PDLIM3Q53GG5 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.99□□□□□ -2.57
PDLIM3Q53GG5 RNY4P29-201ENST00000410801 97 ntBASIC-0.99□□□□□ -2.57
PDLIM3Q53GG5 RNU7-134P-201ENST00000458997 64 ntBASIC-0.99□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.388-201ENST00000383919 113 ntBASIC-1□□□□□ -2.57
PDLIM3Q53GG5 SNORA26.4-201ENST00000391188 123 ntBASIC-1□□□□□ -2.57
PDLIM3Q53GG5 SNORD115-33-201ENST00000363723 82 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 SNORD115-31-201ENST00000365318 82 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.01□□□□□ -2.57
PDLIM3Q53GG5 RNA5SP215-201ENST00000363440 122 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 MIR548Q-201ENST00000408404 100 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 MIR4306-201ENST00000583390 91 ntBASIC-1.02□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.03□□□□□ -2.57
PDLIM3Q53GG5 SNORD113-2-201ENST00000391082 72 ntBASIC-1.03□□□□□ -2.57
PDLIM3Q53GG5 U7.4-201ENST00000614961 63 ntBASIC-1.03□□□□□ -2.57
PDLIM3Q53GG5 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.04□□□□□ -2.58
PDLIM3Q53GG5 MIR6818-201ENST00000621576 65 ntBASIC-1.04□□□□□ -2.58
PDLIM3Q53GG5 MIR429-201ENST00000362106 83 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 MIR29B1-201ENST00000385015 81 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 MIR507-201ENST00000385234 94 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 MIR1255A-201ENST00000408338 113 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 AL353691.2-201ENST00000443795 59 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 RNU6-706P-201ENST00000517229 104 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 MIR3202-2-201ENST00000635980 79 ntBASIC-1.05□□□□□ -2.58
PDLIM3Q53GG5 RNA5SP26-201ENST00000362406 119 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 RNU6-411P-201ENST00000384451 107 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 SNORD116-24-201ENST00000384549 92 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 RNU6-687P-201ENST00000516443 89 ntBASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.06□□□□□ -2.58
PDLIM3Q53GG5 RNA5SP93-201ENST00000362525 114 ntBASIC-1.07□□□□□ -2.58
PDLIM3Q53GG5 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.07□□□□□ -2.58
PDLIM3Q53GG5 RNU6-228P-201ENST00000362700 106 ntBASIC-1.08□□□□□ -2.58
PDLIM3Q53GG5 MIR8485-201ENST00000401372 91 ntBASIC-1.08□□□□□ -2.58
PDLIM3Q53GG5 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.08□□□□□ -2.58
PDLIM3Q53GG5 AP002795.1-201ENST00000534879 84 ntBASIC-1.08□□□□□ -2.58
PDLIM3Q53GG5 SNORD19-201ENST00000391191 68 ntBASIC-1.09□□□□□ -2.58
PDLIM3Q53GG5 MIR889-201ENST00000401280 79 ntBASIC-1.09□□□□□ -2.58
PDLIM3Q53GG5 RNU6-226P-201ENST00000363778 107 ntBASIC-1.1□□□□□ -2.59
PDLIM3Q53GG5 RNU6-576P-201ENST00000390854 102 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms