Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 SNORD116-16-201ENST00000384533 92 ntBASIC-0.64□□□□□ -2.51
VPS41P49754 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
VPS41P49754 U7.5-201ENST00000517224 61 ntBASIC-0.64□□□□□ -2.51
VPS41P49754 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
VPS41P49754 MIR101-1-201ENST00000362265 75 ntBASIC-0.66□□□□□ -2.52
VPS41P49754 MIR429-201ENST00000362106 83 ntBASIC-0.67□□□□□ -2.52
VPS41P49754 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.67□□□□□ -2.52
VPS41P49754 RNU6-800P-201ENST00000384473 103 ntBASIC-0.67□□□□□ -2.52
VPS41P49754 RNU6-92P-201ENST00000605893 104 ntBASIC-0.67□□□□□ -2.52
VPS41P49754 RNU7-88P-201ENST00000458752 63 ntBASIC-0.68□□□□□ -2.52
VPS41P49754 AC114801.3-201ENST00000510231 177 ntBASIC-0.68□□□□□ -2.52
VPS41P49754 MIR4511-201ENST00000582784 87 ntBASIC-0.68□□□□□ -2.52
VPS41P49754 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.69□□□□□ -2.52
VPS41P49754 MIR4493-201ENST00000584016 73 ntBASIC-0.69□□□□□ -2.52
VPS41P49754 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.7□□□□□ -2.52
VPS41P49754 SNORD114-17-201ENST00000364699 75 ntBASIC-0.7□□□□□ -2.52
VPS41P49754 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.7□□□□□ -2.52
VPS41P49754 RNU6-732P-201ENST00000516033 103 ntBASIC-0.7□□□□□ -2.52
VPS41P49754 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.7□□□□□ -2.52
VPS41P49754 MIR4636-201ENST00000582271 80 ntBASIC-0.7□□□□□ -2.52
VPS41P49754 RNU6-598P-201ENST00000364017 105 ntBASIC-0.71□□□□□ -2.52
VPS41P49754 RNU6-696P-201ENST00000390834 107 ntBASIC-0.71□□□□□ -2.52
VPS41P49754 SNORA26.4-201ENST00000391188 123 ntBASIC-0.71□□□□□ -2.52
VPS41P49754 AC103706.3-201ENST00000636297 85 ntBASIC-0.71□□□□□ -2.52
VPS41P49754 SNORD60.1-201ENST00000362451 73 ntBASIC-0.72□□□□□ -2.52
VPS41P49754 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.72□□□□□ -2.52
VPS41P49754 RNA5SP451-201ENST00000410588 110 ntBASIC-0.72□□□□□ -2.52
VPS41P49754 RPS29P8-201ENST00000445109 171 ntBASIC-0.72□□□□□ -2.52
VPS41P49754 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.72□□□□□ -2.52
VPS41P49754 SNORD115-33-201ENST00000363723 82 ntBASIC-0.74□□□□□ -2.53
VPS41P49754 SNORA25.5-201ENST00000363782 126 ntBASIC-0.74□□□□□ -2.53
VPS41P49754 SNORD19-201ENST00000391191 68 ntBASIC-0.75□□□□□ -2.53
VPS41P49754 SNORD1B-201ENST00000363091 84 ntBASIC-0.76□□□□□ -2.53
VPS41P49754 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.76□□□□□ -2.53
VPS41P49754 SNORD57-201ENST00000448188 72 ntBASIC-0.76□□□□□ -2.53
VPS41P49754 SNORD63.1-201ENST00000516178 80 ntBASIC-0.76□□□□□ -2.53
VPS41P49754 RNA5SP192-201ENST00000364404 120 ntBASIC-0.77□□□□□ -2.53
VPS41P49754 MIR604-201ENST00000384880 94 ntBASIC-0.77□□□□□ -2.53
VPS41P49754 Z95118.1-201ENST00000421372 247 ntBASIC-0.77□□□□□ -2.53
VPS41P49754 U2.18-201ENST00000622185 84 ntBASIC-0.77□□□□□ -2.53
VPS41P49754 RNU6-35P-201ENST00000384530 107 ntBASIC-0.78□□□□□ -2.53
VPS41P49754 MIR147A-201ENST00000385079 72 ntBASIC-0.78□□□□□ -2.53
VPS41P49754 RNU6-122P-201ENST00000516818 107 ntBASIC-0.78□□□□□ -2.53
VPS41P49754 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
VPS41P49754 MIR1265-201ENST00000408444 86 ntBASIC-0.79□□□□□ -2.54
VPS41P49754 RNU6-758P-201ENST00000516292 89 ntBASIC-0.79□□□□□ -2.54
VPS41P49754 RNU6-431P-201ENST00000383874 107 ntBASIC-0.8□□□□□ -2.54
VPS41P49754 RNU6-471P-201ENST00000383944 106 ntBASIC-0.8□□□□□ -2.54
VPS41P49754 AL353691.2-201ENST00000443795 59 ntBASIC-0.81□□□□□ -2.54
VPS41P49754 AP002795.1-201ENST00000534879 84 ntBASIC-0.81□□□□□ -2.54
VPS41P49754 AC110620.1-201ENST00000416042 228 ntBASIC-0.83□□□□□ -2.54
VPS41P49754 SNORD64-201ENST00000386683 67 ntBASIC-0.84□□□□□ -2.54
VPS41P49754 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.84□□□□□ -2.54
VPS41P49754 RNU6-669P-201ENST00000365575 107 ntBASIC-0.85□□□□□ -2.55
VPS41P49754 MIR224-201ENST00000384889 81 ntBASIC-0.85□□□□□ -2.55
VPS41P49754 MIR548AA1-201ENST00000384971 97 ntBASIC-0.85□□□□□ -2.55
VPS41P49754 MT-TQ-201ENST00000387372 72 ntBASIC-0.85□□□□□ -2.55
VPS41P49754 RNU6-940P-201ENST00000363433 104 ntBASIC-0.86□□□□□ -2.55
VPS41P49754 RNU6-172P-201ENST00000411000 93 ntBASIC-0.86□□□□□ -2.55
VPS41P49754 MIR5683-201ENST00000636514 76 ntBASIC-0.86□□□□□ -2.55
VPS41P49754 RNA5SP368-201ENST00000364298 116 ntBASIC-0.87□□□□□ -2.55
VPS41P49754 SNORD95.1-201ENST00000364099 68 ntBASIC-0.88□□□□□ -2.55
VPS41P49754 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.88□□□□□ -2.55
VPS41P49754 SNORD114-25-201ENST00000363742 72 ntBASIC-0.89□□□□□ -2.55
VPS41P49754 RNU6-590P-201ENST00000365039 107 ntBASIC-0.89□□□□□ -2.55
VPS41P49754 MIR548Q-201ENST00000408404 100 ntBASIC-0.89□□□□□ -2.55
VPS41P49754 RNU6-231P-201ENST00000517122 103 ntBASIC-0.89□□□□□ -2.55
VPS41P49754 RNU7-151P-201ENST00000516930 53 ntBASIC-0.9□□□□□ -2.55
VPS41P49754 MIR382-201ENST00000637119 76 ntBASIC-0.9□□□□□ -2.55
VPS41P49754 RNA5SP25-201ENST00000410815 110 ntBASIC-0.91□□□□□ -2.56
VPS41P49754 RNU4-63P-201ENST00000411313 118 ntBASIC-0.91□□□□□ -2.56
VPS41P49754 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.91□□□□□ -2.56
VPS41P49754 MIR466-201ENST00000580653 84 ntBASIC-0.91□□□□□ -2.56
VPS41P49754 MIR7110-201ENST00000612638 86 ntBASIC-0.92□□□□□ -2.56
VPS41P49754 MIR7978-201ENST00000636158 59 ntBASIC-0.92□□□□□ -2.56
VPS41P49754 MIR520D-201ENST00000385002 87 ntBASIC-0.93□□□□□ -2.56
VPS41P49754 MIR3938-201ENST00000582157 103 ntBASIC-0.93□□□□□ -2.56
VPS41P49754 MIR3170-201ENST00000582699 77 ntBASIC-0.93□□□□□ -2.56
VPS41P49754 MIR579-201ENST00000385221 98 ntBASIC-0.95□□□□□ -2.56
VPS41P49754 MIR4490-201ENST00000582647 84 ntBASIC-0.95□□□□□ -2.56
VPS41P49754 MIR125B1-201ENST00000385236 88 ntBASIC-0.96□□□□□ -2.56
VPS41P49754 AL500527.2-201ENST00000454105 95 ntBASIC-0.96□□□□□ -2.56
VPS41P49754 AC139453.2-201ENST00000487255 133 ntBASIC-0.96□□□□□ -2.56
VPS41P49754 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.96□□□□□ -2.56
VPS41P49754 RNA5SP26-201ENST00000362406 119 ntBASIC-0.97□□□□□ -2.56
VPS41P49754 MIR29B1-201ENST00000385015 81 ntBASIC-0.97□□□□□ -2.56
VPS41P49754 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
VPS41P49754 RNU6-995P-201ENST00000391244 107 ntBASIC-0.97□□□□□ -2.56
VPS41P49754 MIR3681-201ENST00000580089 72 ntBASIC-0.97□□□□□ -2.56
VPS41P49754 MIR6086-201ENST00000638065 55 ntBASIC-0.97□□□□□ -2.56
VPS41P49754 MIR507-201ENST00000385234 94 ntBASIC-0.98□□□□□ -2.57
VPS41P49754 MIR196A1-201ENST00000388006 70 ntBASIC-0.98□□□□□ -2.57
VPS41P49754 RNU7-160P-201ENST00000516660 62 ntBASIC-0.98□□□□□ -2.57
VPS41P49754 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.98□□□□□ -2.57
VPS41P49754 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.99□□□□□ -2.57
VPS41P49754 SNORD116.2-201ENST00000391251 93 ntBASIC-0.99□□□□□ -2.57
VPS41P49754 RNU7-119P-201ENST00000459279 63 ntBASIC-0.99□□□□□ -2.57
VPS41P49754 RNU6-810P-201ENST00000364001 107 ntBASIC-1□□□□□ -2.57
VPS41P49754 RNU6-608P-201ENST00000383927 104 ntBASIC-1□□□□□ -2.57
VPS41P49754 RNU6-1111P-201ENST00000391118 107 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 616.6 ms