Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 RNU6-122P-201ENST00000516818 107 ntBASIC-0.43□□□□□ -2.48
RFX2P48378 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.43□□□□□ -2.48
RFX2P48378 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.43□□□□□ -2.48
RFX2P48378 IGLVI-20-201ENST00000519296 130 ntBASIC-0.43□□□□□ -2.48
RFX2P48378 SNORD1B-201ENST00000363091 84 ntBASIC-0.44□□□□□ -2.48
RFX2P48378 MIR1265-201ENST00000408444 86 ntBASIC-0.44□□□□□ -2.48
RFX2P48378 RNU6-284P-201ENST00000411105 106 ntBASIC-0.44□□□□□ -2.48
RFX2P48378 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.44□□□□□ -2.48
RFX2P48378 U2.18-201ENST00000622185 84 ntBASIC-0.44□□□□□ -2.48
RFX2P48378 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 RNU6-940P-201ENST00000363433 104 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 RNU6-696P-201ENST00000390834 107 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 SNORA3B-201ENST00000391305 131 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 AC125388.1-201ENST00000459631 156 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 AC021146.6-201ENST00000514659 117 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 RNU6-732P-201ENST00000516033 103 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 RNA5SP285-201ENST00000516619 119 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 MIR8064-201ENST00000612863 90 ntBASIC-0.45□□□□□ -2.48
RFX2P48378 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.46□□□□□ -2.48
RFX2P48378 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
RFX2P48378 SNORD114-17-201ENST00000364699 75 ntBASIC-0.46□□□□□ -2.48
RFX2P48378 MIR466-201ENST00000580653 84 ntBASIC-0.47□□□□□ -2.48
RFX2P48378 MIR4436A-201ENST00000585278 85 ntBASIC-0.47□□□□□ -2.48
RFX2P48378 MIR4645-201ENST00000583158 77 ntBASIC-0.48□□□□□ -2.49
RFX2P48378 SNORD114-28-201ENST00000363610 72 ntBASIC-0.49□□□□□ -2.49
RFX2P48378 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.49□□□□□ -2.49
RFX2P48378 RNU6-172P-201ENST00000411000 93 ntBASIC-0.49□□□□□ -2.49
RFX2P48378 SNORD63.1-201ENST00000516178 80 ntBASIC-0.5□□□□□ -2.49
RFX2P48378 MIR6759-201ENST00000638110 65 ntBASIC-0.5□□□□□ -2.49
RFX2P48378 SNORA26.4-201ENST00000391188 123 ntBASIC-0.51□□□□□ -2.49
RFX2P48378 SNORD57-201ENST00000448188 72 ntBASIC-0.51□□□□□ -2.49
RFX2P48378 RNU6-231P-201ENST00000517122 103 ntBASIC-0.51□□□□□ -2.49
RFX2P48378 SNORD114-14-201ENST00000362723 75 ntBASIC-0.52□□□□□ -2.49
RFX2P48378 RNU6-669P-201ENST00000365575 107 ntBASIC-0.52□□□□□ -2.49
RFX2P48378 MIR548Q-201ENST00000408404 100 ntBASIC-0.52□□□□□ -2.49
RFX2P48378 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.52□□□□□ -2.49
RFX2P48378 MIR579-201ENST00000385221 98 ntBASIC-0.53□□□□□ -2.49
RFX2P48378 SNORD19-201ENST00000391191 68 ntBASIC-0.53□□□□□ -2.49
RFX2P48378 SNORD115-33-201ENST00000363723 82 ntBASIC-0.54□□□□□ -2.5
RFX2P48378 SNORD116.2-201ENST00000391251 93 ntBASIC-0.54□□□□□ -2.5
RFX2P48378 MIR3938-201ENST00000582157 103 ntBASIC-0.54□□□□□ -2.5
RFX2P48378 MIR548AA1-201ENST00000384971 97 ntBASIC-0.55□□□□□ -2.5
RFX2P48378 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.55□□□□□ -2.5
RFX2P48378 MIR7110-201ENST00000612638 86 ntBASIC-0.55□□□□□ -2.5
RFX2P48378 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.56□□□□□ -2.5
RFX2P48378 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
RFX2P48378 RNU6-788P-201ENST00000390967 104 ntBASIC-0.56□□□□□ -2.5
RFX2P48378 AL353691.2-201ENST00000443795 59 ntBASIC-0.56□□□□□ -2.5
RFX2P48378 RNU7-151P-201ENST00000516930 53 ntBASIC-0.56□□□□□ -2.5
RFX2P48378 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.56□□□□□ -2.5
RFX2P48378 MIR548AZ-201ENST00000616567 95 ntBASIC-0.56□□□□□ -2.5
RFX2P48378 AP002795.1-201ENST00000534879 84 ntBASIC-0.57□□□□□ -2.5
RFX2P48378 RNU6-995P-201ENST00000391244 107 ntBASIC-0.58□□□□□ -2.5
RFX2P48378 AP001180.6-201ENST00000584918 159 ntBASIC-0.58□□□□□ -2.5
RFX2P48378 RNU6-810P-201ENST00000364001 107 ntBASIC-0.59□□□□□ -2.5
RFX2P48378 MIR5683-201ENST00000636514 76 ntBASIC-0.59□□□□□ -2.5
RFX2P48378 RNU7-119P-201ENST00000459279 63 ntBASIC-0.6□□□□□ -2.51
RFX2P48378 RPS29P8-201ENST00000445109 171 ntBASIC-0.61□□□□□ -2.51
RFX2P48378 MIR7978-201ENST00000636158 59 ntBASIC-0.61□□□□□ -2.51
RFX2P48378 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.62□□□□□ -2.51
RFX2P48378 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
RFX2P48378 MIR5589-201ENST00000579442 60 ntBASIC-0.62□□□□□ -2.51
RFX2P48378 MIR3170-201ENST00000582699 77 ntBASIC-0.62□□□□□ -2.51
RFX2P48378 RNU6-431P-201ENST00000383874 107 ntBASIC-0.63□□□□□ -2.51
RFX2P48378 MIR633-201ENST00000384821 98 ntBASIC-0.63□□□□□ -2.51
RFX2P48378 SNORA40.16-201ENST00000517238 121 ntBASIC-0.63□□□□□ -2.51
RFX2P48378 MIR4802-201ENST00000581881 80 ntBASIC-0.63□□□□□ -2.51
RFX2P48378 SNORD114-25-201ENST00000363742 72 ntBASIC-0.64□□□□□ -2.51
RFX2P48378 MIR507-201ENST00000385234 94 ntBASIC-0.64□□□□□ -2.51
RFX2P48378 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.64□□□□□ -2.51
RFX2P48378 MIR4490-201ENST00000582647 84 ntBASIC-0.64□□□□□ -2.51
RFX2P48378 RNU6-247P-201ENST00000362636 107 ntBASIC-0.65□□□□□ -2.51
RFX2P48378 RNU6-520P-201ENST00000384717 104 ntBASIC-0.65□□□□□ -2.51
RFX2P48378 MIR520D-201ENST00000385002 87 ntBASIC-0.65□□□□□ -2.51
RFX2P48378 MIR147A-201ENST00000385079 72 ntBASIC-0.65□□□□□ -2.51
RFX2P48378 SNORA40B-201ENST00000385573 128 ntBASIC-0.65□□□□□ -2.51
RFX2P48378 SNORD64-201ENST00000386683 67 ntBASIC-0.65□□□□□ -2.51
RFX2P48378 RNA5SP451-201ENST00000410588 110 ntBASIC-0.65□□□□□ -2.51
RFX2P48378 MIR101-1-201ENST00000362265 75 ntBASIC-0.66□□□□□ -2.52
RFX2P48378 RNU6-446P-201ENST00000362827 106 ntBASIC-0.67□□□□□ -2.52
RFX2P48378 MIR4493-201ENST00000584016 73 ntBASIC-0.67□□□□□ -2.52
RFX2P48378 RPL35AP4-201ENST00000412007 102 ntBASIC-0.68□□□□□ -2.52
RFX2P48378 RNU7-160P-201ENST00000516660 62 ntBASIC-0.68□□□□□ -2.52
RFX2P48378 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.69□□□□□ -2.52
RFX2P48378 MIR125B1-201ENST00000385236 88 ntBASIC-0.69□□□□□ -2.52
RFX2P48378 MIR4636-201ENST00000582271 80 ntBASIC-0.69□□□□□ -2.52
RFX2P48378 SNORD63.2-201ENST00000516303 64 ntBASIC-0.7□□□□□ -2.52
RFX2P48378 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.7□□□□□ -2.52
RFX2P48378 RNU6-829P-201ENST00000363700 112 ntBASIC-0.71□□□□□ -2.52
RFX2P48378 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.72□□□□□ -2.52
RFX2P48378 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.72□□□□□ -2.52
RFX2P48378 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.73□□□□□ -2.53
RFX2P48378 RNU6-608P-201ENST00000383927 104 ntBASIC-0.73□□□□□ -2.53
RFX2P48378 RNU6-974P-201ENST00000384099 108 ntBASIC-0.73□□□□□ -2.53
RFX2P48378 MIR604-201ENST00000384880 94 ntBASIC-0.73□□□□□ -2.53
RFX2P48378 MIR224-201ENST00000384889 81 ntBASIC-0.73□□□□□ -2.53
RFX2P48378 RNU6-258P-201ENST00000390884 101 ntBASIC-0.73□□□□□ -2.53
RFX2P48378 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.73□□□□□ -2.53
RFX2P48378 MIR382-201ENST00000637119 76 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 227.3 ms