Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RNU6-1233P-201ENST00000362922 102 ntBASIC0.48□□□□□ -2.33
LMO1P25800 SNORA62.4-201ENST00000365504 151 ntBASIC0.48□□□□□ -2.33
LMO1P25800 RNU6-815P-201ENST00000384080 113 ntBASIC0.48□□□□□ -2.33
LMO1P25800 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
LMO1P25800 RNU6-1111P-201ENST00000391118 107 ntBASIC0.48□□□□□ -2.33
LMO1P25800 RNU7-129P-201ENST00000516128 62 ntBASIC0.48□□□□□ -2.33
LMO1P25800 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
LMO1P25800 MIR8087-201ENST00000612745 78 ntBASIC0.48□□□□□ -2.33
LMO1P25800 Y_RNA.321-201ENST00000365149 102 ntBASIC0.47□□□□□ -2.33
LMO1P25800 MIR124-2-201ENST00000385081 109 ntBASIC0.47□□□□□ -2.33
LMO1P25800 AC108740.1-201ENST00000498629 225 ntBASIC0.47□□□□□ -2.33
LMO1P25800 snoR1.1-201ENST00000628177 80 ntBASIC0.47□□□□□ -2.33
LMO1P25800 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
LMO1P25800 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
LMO1P25800 RNU6-455P-201ENST00000384681 107 ntBASIC0.46□□□□□ -2.34
LMO1P25800 RNA5SP330-201ENST00000517096 96 ntBASIC0.46□□□□□ -2.34
LMO1P25800 MIR4280-201ENST00000582178 76 ntBASIC0.46□□□□□ -2.34
LMO1P25800 MIR643-201ENST00000385267 97 ntBASIC0.45□□□□□ -2.34
LMO1P25800 AC244250.2-201ENST00000418731 148 ntBASIC0.45□□□□□ -2.34
LMO1P25800 MIR6854-201ENST00000614935 69 ntBASIC0.45□□□□□ -2.34
LMO1P25800 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
LMO1P25800 MIR4317-201ENST00000637586 65 ntBASIC0.45□□□□□ -2.34
LMO1P25800 MIR330-201ENST00000362196 94 ntBASIC0.44□□□□□ -2.34
LMO1P25800 RNU6-180P-201ENST00000516697 61 ntBASIC0.44□□□□□ -2.34
LMO1P25800 MIR6514-201ENST00000622549 70 ntBASIC0.44□□□□□ -2.34
LMO1P25800 RNU6-133P-201ENST00000383989 107 ntBASIC0.43□□□□□ -2.34
LMO1P25800 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
LMO1P25800 RNU6-1133P-201ENST00000410963 100 ntBASIC0.43□□□□□ -2.34
LMO1P25800 AC013734.1-201ENST00000619329 111 ntBASIC0.43□□□□□ -2.34
LMO1P25800 SNORA17.4-201ENST00000391287 132 ntBASIC0.42□□□□□ -2.34
LMO1P25800 MIR548Q-201ENST00000408404 100 ntBASIC0.42□□□□□ -2.34
LMO1P25800 Y_RNA.699-201ENST00000516803 93 ntBASIC0.42□□□□□ -2.34
LMO1P25800 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
LMO1P25800 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
LMO1P25800 Y_RNA.68-201ENST00000362881 102 ntBASIC0.41□□□□□ -2.34
LMO1P25800 RNA5SP257-201ENST00000363023 116 ntBASIC0.41□□□□□ -2.34
LMO1P25800 MIR548N-201ENST00000408742 75 ntBASIC0.41□□□□□ -2.34
LMO1P25800 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
LMO1P25800 CR383656.4-201ENST00000546909 122 ntBASIC0.41□□□□□ -2.34
LMO1P25800 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
LMO1P25800 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
LMO1P25800 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
LMO1P25800 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
LMO1P25800 MIR1197-201ENST00000408818 88 ntBASIC0.39□□□□□ -2.35
LMO1P25800 MIR5683-201ENST00000636514 76 ntBASIC0.39□□□□□ -2.35
LMO1P25800 Y_RNA.178-201ENST00000363832 102 ntBASIC0.38□□□□□ -2.35
LMO1P25800 Y_RNA.320-201ENST00000365144 102 ntBASIC0.38□□□□□ -2.35
LMO1P25800 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
LMO1P25800 Y_RNA.382-201ENST00000365672 114 ntBASIC0.38□□□□□ -2.35
LMO1P25800 RNA5SP163-201ENST00000410304 99 ntBASIC0.38□□□□□ -2.35
LMO1P25800 RNA5SP67-201ENST00000516422 131 ntBASIC0.38□□□□□ -2.35
LMO1P25800 SNORD38.3-201ENST00000516599 73 ntBASIC0.38□□□□□ -2.35
LMO1P25800 AC069113.3-201ENST00000521019 150 ntBASIC0.38□□□□□ -2.35
LMO1P25800 MIR148A-201ENST00000362215 68 ntBASIC0.37□□□□□ -2.35
LMO1P25800 RNA5SP62-201ENST00000363457 110 ntBASIC0.37□□□□□ -2.35
LMO1P25800 RNU6-563P-201ENST00000364872 108 ntBASIC0.37□□□□□ -2.35
LMO1P25800 SNORA26.4-201ENST00000391188 123 ntBASIC0.37□□□□□ -2.35
LMO1P25800 RPL35AP4-201ENST00000412007 102 ntBASIC0.37□□□□□ -2.35
LMO1P25800 RNA5SP169-201ENST00000517268 117 ntBASIC0.37□□□□□ -2.35
LMO1P25800 Y_RNA.134-201ENST00000363435 105 ntBASIC0.36□□□□□ -2.35
LMO1P25800 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.35□□□□□ -2.35
LMO1P25800 MIR6851-201ENST00000617060 67 ntBASIC0.35□□□□□ -2.35
LMO1P25800 Y_RNA.223-201ENST00000364290 113 ntBASIC0.34□□□□□ -2.36
LMO1P25800 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.34□□□□□ -2.36
LMO1P25800 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
LMO1P25800 MIR892B-201ENST00000401279 77 ntBASIC0.33□□□□□ -2.36
LMO1P25800 AL445193.1-201ENST00000441183 141 ntBASIC0.33□□□□□ -2.36
LMO1P25800 RNU7-165P-201ENST00000458864 60 ntBASIC0.33□□□□□ -2.36
LMO1P25800 AL590491.3-201ENST00000610731 82 ntBASIC0.33□□□□□ -2.36
LMO1P25800 Y_RNA.433-201ENST00000384089 102 ntBASIC0.32□□□□□ -2.36
LMO1P25800 MIR4514-201ENST00000581410 57 ntBASIC0.32□□□□□ -2.36
LMO1P25800 RNA5SP26-201ENST00000362406 119 ntBASIC0.31□□□□□ -2.36
LMO1P25800 RNU6-1091P-201ENST00000363945 107 ntBASIC0.31□□□□□ -2.36
LMO1P25800 MIR593-201ENST00000384856 100 ntBASIC0.31□□□□□ -2.36
LMO1P25800 AL353691.2-201ENST00000443795 59 ntBASIC0.31□□□□□ -2.36
LMO1P25800 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.31□□□□□ -2.36
LMO1P25800 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.31□□□□□ -2.36
LMO1P25800 SNORD115-33-201ENST00000363723 82 ntBASIC0.3□□□□□ -2.36
LMO1P25800 MIR548T-201ENST00000408369 74 ntBASIC0.3□□□□□ -2.36
LMO1P25800 RNA5SP224-201ENST00000365069 126 ntBASIC0.29□□□□□ -2.36
LMO1P25800 MIR145-201ENST00000384967 88 ntBASIC0.29□□□□□ -2.36
LMO1P25800 MIR548AJ2-201ENST00000408539 92 ntBASIC0.29□□□□□ -2.36
LMO1P25800 AC090616.4-201ENST00000448026 115 ntBASIC0.29□□□□□ -2.36
LMO1P25800 SNORD22.1-201ENST00000516331 125 ntBASIC0.29□□□□□ -2.36
LMO1P25800 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.29□□□□□ -2.36
LMO1P25800 RNU6-1169P-201ENST00000363537 103 ntBASIC0.28□□□□□ -2.36
LMO1P25800 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
LMO1P25800 RNY1P9-201ENST00000532431 109 ntBASIC0.28□□□□□ -2.36
LMO1P25800 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
LMO1P25800 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.37
LMO1P25800 Y_RNA.189-201ENST00000363959 112 ntBASIC0.27□□□□□ -2.37
LMO1P25800 SNORD114-17-201ENST00000364699 75 ntBASIC0.27□□□□□ -2.37
LMO1P25800 RNU6-901P-201ENST00000384593 106 ntBASIC0.27□□□□□ -2.37
LMO1P25800 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
LMO1P25800 Y_RNA.519-201ENST00000384553 102 ntBASIC0.26□□□□□ -2.37
LMO1P25800 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
LMO1P25800 RNU6-176P-201ENST00000517196 105 ntBASIC0.26□□□□□ -2.37
LMO1P25800 MIR4645-201ENST00000583158 77 ntBASIC0.26□□□□□ -2.37
LMO1P25800 U6.97-201ENST00000636904 101 ntBASIC0.26□□□□□ -2.37
LMO1P25800 SNORD114-5-201ENST00000362928 70 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms