Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.46□□□□□ -2.64
BDNFP23560 RNU6-315P-201ENST00000362666 107 ntBASIC-1.46□□□□□ -2.64
BDNFP23560 RNU6-668P-201ENST00000364180 107 ntBASIC-1.46□□□□□ -2.64
BDNFP23560 RNU6-147P-201ENST00000383983 107 ntBASIC-1.46□□□□□ -2.64
BDNFP23560 MIR8485-201ENST00000401372 91 ntBASIC-1.46□□□□□ -2.64
BDNFP23560 SNORD113.1-201ENST00000363280 73 ntBASIC-1.47□□□□□ -2.64
BDNFP23560 RNU6-598P-201ENST00000364017 105 ntBASIC-1.47□□□□□ -2.64
BDNFP23560 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.47□□□□□ -2.64
BDNFP23560 MIR6874-201ENST00000635894 71 ntBASIC-1.47□□□□□ -2.64
BDNFP23560 SNORA63.4-201ENST00000362763 126 ntBASIC-1.48□□□□□ -2.65
BDNFP23560 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.48□□□□□ -2.65
BDNFP23560 SNORD113-2-201ENST00000391082 72 ntBASIC-1.48□□□□□ -2.65
BDNFP23560 MIR889-201ENST00000401280 79 ntBASIC-1.48□□□□□ -2.65
BDNFP23560 RNU6-168P-201ENST00000516189 101 ntBASIC-1.48□□□□□ -2.65
BDNFP23560 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.49□□□□□ -2.65
BDNFP23560 RNU6-215P-201ENST00000365169 102 ntBASIC-1.49□□□□□ -2.65
BDNFP23560 MIR630-201ENST00000384957 97 ntBASIC-1.49□□□□□ -2.65
BDNFP23560 RNU6-630P-201ENST00000391258 106 ntBASIC-1.49□□□□□ -2.65
BDNFP23560 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.49□□□□□ -2.65
BDNFP23560 RNU6-919P-201ENST00000516731 104 ntBASIC-1.49□□□□□ -2.65
BDNFP23560 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.49□□□□□ -2.65
BDNFP23560 MIR6502-201ENST00000617296 76 ntBASIC-1.49□□□□□ -2.65
BDNFP23560 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.5□□□□□ -2.65
BDNFP23560 RNA5SP173-201ENST00000364857 136 ntBASIC-1.5□□□□□ -2.65
BDNFP23560 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.5□□□□□ -2.65
BDNFP23560 AC018880.2-201ENST00000414265 201 ntBASIC-1.5□□□□□ -2.65
BDNFP23560 AL606753.1-201ENST00000427435 87 ntBASIC-1.5□□□□□ -2.65
BDNFP23560 IGLL4P-201ENST00000614590 133 ntBASIC-1.5□□□□□ -2.65
BDNFP23560 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.51□□□□□ -2.65
BDNFP23560 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.52□□□□□ -2.65
BDNFP23560 RNU6-608P-201ENST00000383927 104 ntBASIC-1.52□□□□□ -2.65
BDNFP23560 SNORD116-16-201ENST00000384533 92 ntBASIC-1.52□□□□□ -2.65
BDNFP23560 SNORD20-201ENST00000384550 80 ntBASIC-1.52□□□□□ -2.65
BDNFP23560 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.52□□□□□ -2.65
BDNFP23560 MIR23C-201ENST00000579846 100 ntBASIC-1.52□□□□□ -2.65
BDNFP23560 RNY1P1-201ENST00000364372 112 ntBASIC-1.53□□□□□ -2.65
BDNFP23560 SNORD45A-201ENST00000384512 84 ntBASIC-1.53□□□□□ -2.65
BDNFP23560 MIR4770-201ENST00000579149 58 ntBASIC-1.53□□□□□ -2.65
BDNFP23560 MIR5588-201ENST00000581890 63 ntBASIC-1.53□□□□□ -2.65
BDNFP23560 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.54□□□□□ -2.66
BDNFP23560 HLA-S-202ENST00000425174 53 ntBASIC-1.54□□□□□ -2.66
BDNFP23560 MIR5591-201ENST00000578248 65 ntBASIC-1.54□□□□□ -2.66
BDNFP23560 U2.18-201ENST00000622185 84 ntBASIC-1.54□□□□□ -2.66
BDNFP23560 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.55□□□□□ -2.66
BDNFP23560 RNU6-979P-201ENST00000383896 107 ntBASIC-1.55□□□□□ -2.66
BDNFP23560 MIR548AA1-201ENST00000384971 97 ntBASIC-1.55□□□□□ -2.66
BDNFP23560 MIR520D-201ENST00000385002 87 ntBASIC-1.55□□□□□ -2.66
BDNFP23560 RNU6-400P-201ENST00000391173 106 ntBASIC-1.55□□□□□ -2.66
BDNFP23560 MIR664A-201ENST00000626086 82 ntBASIC-1.55□□□□□ -2.66
BDNFP23560 RNU6-79P-201ENST00000362511 107 ntBASIC-1.56□□□□□ -2.66
BDNFP23560 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.56□□□□□ -2.66
BDNFP23560 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.56□□□□□ -2.66
BDNFP23560 MIR4520-1-201ENST00000582609 70 ntBASIC-1.56□□□□□ -2.66
BDNFP23560 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.57□□□□□ -2.66
BDNFP23560 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.57□□□□□ -2.66
BDNFP23560 RNU6-49P-201ENST00000384256 107 ntBASIC-1.58□□□□□ -2.66
BDNFP23560 MIR3170-201ENST00000582699 77 ntBASIC-1.58□□□□□ -2.66
BDNFP23560 SNORA41B-201ENST00000384785 128 ntBASIC-1.59□□□□□ -2.66
BDNFP23560 RNU7-171P-201ENST00000459581 62 ntBASIC-1.59□□□□□ -2.66
BDNFP23560 RNU6-789P-201ENST00000517105 102 ntBASIC-1.59□□□□□ -2.66
BDNFP23560 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.6□□□□□ -2.67
BDNFP23560 AL603908.1-201ENST00000406098 201 ntBASIC-1.6□□□□□ -2.67
BDNFP23560 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.6□□□□□ -2.67
BDNFP23560 MIR1245B-201ENST00000636115 69 ntBASIC-1.6□□□□□ -2.67
BDNFP23560 MIR1246-201ENST00000636535 73 ntBASIC-1.6□□□□□ -2.67
BDNFP23560 RNY4P27-201ENST00000363341 96 ntBASIC-1.61□□□□□ -2.67
BDNFP23560 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.61□□□□□ -2.67
BDNFP23560 RNU6-70P-201ENST00000516438 60 ntBASIC-1.61□□□□□ -2.67
BDNFP23560 SNORD1B-201ENST00000363091 84 ntBASIC-1.62□□□□□ -2.67
BDNFP23560 RNU6-44P-201ENST00000384045 107 ntBASIC-1.62□□□□□ -2.67
BDNFP23560 MIR154-201ENST00000385243 84 ntBASIC-1.62□□□□□ -2.67
BDNFP23560 RNA5SP89-201ENST00000410300 108 ntBASIC-1.62□□□□□ -2.67
BDNFP23560 MIR4712-201ENST00000583750 82 ntBASIC-1.62□□□□□ -2.67
BDNFP23560 RNU6-895P-201ENST00000384125 103 ntBASIC-1.63□□□□□ -2.67
BDNFP23560 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.63□□□□□ -2.67
BDNFP23560 RNU6-247P-201ENST00000362636 107 ntBASIC-1.64□□□□□ -2.67
BDNFP23560 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.64□□□□□ -2.67
BDNFP23560 SNORD116-24-201ENST00000384549 92 ntBASIC-1.64□□□□□ -2.67
BDNFP23560 RNU6-995P-201ENST00000391244 107 ntBASIC-1.64□□□□□ -2.67
BDNFP23560 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.65□□□□□ -2.67
BDNFP23560 MIR548AI-201ENST00000579940 88 ntBASIC-1.66□□□□□ -2.68
BDNFP23560 RNU6-242P-201ENST00000384359 107 ntBASIC-1.68□□□□□ -2.68
BDNFP23560 RNY4P30-201ENST00000410216 95 ntBASIC-1.68□□□□□ -2.68
BDNFP23560 RNU6-406P-201ENST00000516470 107 ntBASIC-1.68□□□□□ -2.68
BDNFP23560 RNU7-151P-201ENST00000516930 53 ntBASIC-1.68□□□□□ -2.68
BDNFP23560 AC120024.2-201ENST00000576526 175 ntBASIC-1.68□□□□□ -2.68
BDNFP23560 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.69□□□□□ -2.68
BDNFP23560 RNU6-542P-201ENST00000516405 103 ntBASIC-1.69□□□□□ -2.68
BDNFP23560 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.69□□□□□ -2.68
BDNFP23560 RNA5SP86-201ENST00000390869 98 ntBASIC-1.7□□□□□ -2.68
BDNFP23560 MIR548H1-201ENST00000408610 102 ntBASIC-1.7□□□□□ -2.68
BDNFP23560 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.7□□□□□ -2.68
BDNFP23560 SNORA27.2-201ENST00000363365 126 ntBASIC-1.71□□□□□ -2.68
BDNFP23560 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.71□□□□□ -2.68
BDNFP23560 SNORD115-31-201ENST00000365318 82 ntBASIC-1.71□□□□□ -2.68
BDNFP23560 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.71□□□□□ -2.68
BDNFP23560 MIR450A2-201ENST00000385022 100 ntBASIC-1.71□□□□□ -2.68
BDNFP23560 RNU6-258P-201ENST00000390884 101 ntBASIC-1.71□□□□□ -2.68
BDNFP23560 RNU6-695P-201ENST00000391157 104 ntBASIC-1.71□□□□□ -2.68
BDNFP23560 RNU6-172P-201ENST00000411000 93 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms