Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
CD44P16070 RNU6-815P-201ENST00000384080 113 ntBASIC1□□□□□ -2.25
CD44P16070 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
CD44P16070 PSMC1P5-201ENST00000512850 177 ntBASIC0.98□□□□□ -2.25
CD44P16070 snoU13.31-201ENST00000607291 104 ntBASIC0.98□□□□□ -2.25
CD44P16070 RNU6-1053P-201ENST00000515930 101 ntBASIC0.97□□□□□ -2.25
CD44P16070 MIR3973-201ENST00000579824 107 ntBASIC0.97□□□□□ -2.25
CD44P16070 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.97□□□□□ -2.25
CD44P16070 MIR655-201ENST00000362159 97 ntBASIC0.96□□□□□ -2.26
CD44P16070 Y_RNA.164-201ENST00000363709 102 ntBASIC0.96□□□□□ -2.26
CD44P16070 SNORD114-17-201ENST00000364699 75 ntBASIC0.96□□□□□ -2.26
CD44P16070 SNORA68.3-201ENST00000515906 83 ntBASIC0.96□□□□□ -2.26
CD44P16070 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
CD44P16070 MIR6767-201ENST00000637302 66 ntBASIC0.96□□□□□ -2.26
CD44P16070 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
CD44P16070 RNU6-912P-201ENST00000363800 104 ntBASIC0.95□□□□□ -2.26
CD44P16070 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
CD44P16070 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.95□□□□□ -2.26
CD44P16070 AC090616.4-201ENST00000448026 115 ntBASIC0.95□□□□□ -2.26
CD44P16070 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.94□□□□□ -2.26
CD44P16070 SNORD22.1-201ENST00000516331 125 ntBASIC0.93□□□□□ -2.26
CD44P16070 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
CD44P16070 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
CD44P16070 AL603825.1-201ENST00000438481 80 ntBASIC0.92□□□□□ -2.26
CD44P16070 RNU1-93P-201ENST00000364704 169 ntBASIC0.91□□□□□ -2.26
CD44P16070 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
CD44P16070 Y_RNA.781-201ENST00000620301 103 ntBASIC0.91□□□□□ -2.26
CD44P16070 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
CD44P16070 MIR518B-201ENST00000385127 83 ntBASIC0.9□□□□□ -2.27
CD44P16070 MIR4498-201ENST00000577599 66 ntBASIC0.9□□□□□ -2.27
CD44P16070 MIR96-201ENST00000362288 78 ntBASIC0.89□□□□□ -2.27
CD44P16070 TRMT112P2-201ENST00000512910 132 ntBASIC0.89□□□□□ -2.27
CD44P16070 AC069113.3-201ENST00000521019 150 ntBASIC0.89□□□□□ -2.27
CD44P16070 AC090625.1-201ENST00000357130 210 ntBASIC0.88□□□□□ -2.27
CD44P16070 RNA5SP62-201ENST00000363457 110 ntBASIC0.88□□□□□ -2.27
CD44P16070 SNORD75.1-201ENST00000408373 60 ntBASIC0.88□□□□□ -2.27
CD44P16070 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.88□□□□□ -2.27
CD44P16070 MIRLET7D-201ENST00000362263 87 ntBASIC0.87□□□□□ -2.27
CD44P16070 MIR656-201ENST00000385224 78 ntBASIC0.87□□□□□ -2.27
CD44P16070 MIR6857-201ENST00000613267 93 ntBASIC0.85□□□□□ -2.27
CD44P16070 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.85□□□□□ -2.27
CD44P16070 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
CD44P16070 RNU7-165P-201ENST00000458864 60 ntBASIC0.83□□□□□ -2.28
CD44P16070 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
CD44P16070 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
CD44P16070 MIR593-201ENST00000384856 100 ntBASIC0.82□□□□□ -2.28
CD44P16070 MIR1287-201ENST00000408492 90 ntBASIC0.82□□□□□ -2.28
CD44P16070 AP000533.3-201ENST00000447704 118 ntBASIC0.8□□□□□ -2.28
CD44P16070 MIR4743-201ENST00000584576 69 ntBASIC0.8□□□□□ -2.28
CD44P16070 RNA5SP26-201ENST00000362406 119 ntBASIC0.79□□□□□ -2.28
CD44P16070 Y_RNA.226-201ENST00000364337 114 ntBASIC0.79□□□□□ -2.28
CD44P16070 MIR499A-201ENST00000384903 122 ntBASIC0.79□□□□□ -2.28
CD44P16070 MIR610-201ENST00000385139 96 ntBASIC0.78□□□□□ -2.28
CD44P16070 RNU7-159P-201ENST00000459284 62 ntBASIC0.78□□□□□ -2.28
CD44P16070 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
CD44P16070 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CD44P16070 Y_RNA.118-201ENST00000363300 101 ntBASIC0.77□□□□□ -2.29
CD44P16070 Y_RNA.189-201ENST00000363959 112 ntBASIC0.77□□□□□ -2.29
CD44P16070 MIR216A-201ENST00000385063 110 ntBASIC0.77□□□□□ -2.29
CD44P16070 RNA5SP66-201ENST00000517178 101 ntBASIC0.77□□□□□ -2.29
CD44P16070 MIR4645-201ENST00000583158 77 ntBASIC0.76□□□□□ -2.29
CD44P16070 MIR6734-201ENST00000621166 68 ntBASIC0.76□□□□□ -2.29
CD44P16070 MIR3179-1-201ENST00000578940 84 ntBASIC0.75□□□□□ -2.29
CD44P16070 MIR3179-2-201ENST00000579107 84 ntBASIC0.75□□□□□ -2.29
CD44P16070 MIR3179-3-201ENST00000579566 84 ntBASIC0.75□□□□□ -2.29
CD44P16070 MIR8070-201ENST00000616510 88 ntBASIC0.75□□□□□ -2.29
CD44P16070 MIR3179-4-201ENST00000617599 84 ntBASIC0.75□□□□□ -2.29
CD44P16070 AC093726.3-201ENST00000637588 150 ntBASIC0.75□□□□□ -2.29
CD44P16070 SNORA32.1-201ENST00000364514 115 ntBASIC0.74□□□□□ -2.29
CD44P16070 SNORD49B-201ENST00000365172 72 ntBASIC0.74□□□□□ -2.29
CD44P16070 RNU6-42P-201ENST00000384165 107 ntBASIC0.74□□□□□ -2.29
CD44P16070 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CD44P16070 RNA5SP220-201ENST00000516298 104 ntBASIC0.74□□□□□ -2.29
CD44P16070 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
CD44P16070 MIR145-201ENST00000384967 88 ntBASIC0.73□□□□□ -2.29
CD44P16070 RNU6-284P-201ENST00000411105 106 ntBASIC0.72□□□□□ -2.29
CD44P16070 RNA5SP121-201ENST00000516537 101 ntBASIC0.72□□□□□ -2.29
CD44P16070 snoU13.18-201ENST00000459483 104 ntBASIC0.71□□□□□ -2.3
CD44P16070 RNU6-345P-201ENST00000517001 107 ntBASIC0.71□□□□□ -2.3
CD44P16070 MIR6504-201ENST00000613520 61 ntBASIC0.71□□□□□ -2.3
CD44P16070 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
CD44P16070 MIR4452-201ENST00000583004 71 ntBASIC0.7□□□□□ -2.3
CD44P16070 AL590491.3-201ENST00000610731 82 ntBASIC0.7□□□□□ -2.3
CD44P16070 RNU6-620P-201ENST00000384017 96 ntBASIC0.68□□□□□ -2.3
CD44P16070 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
CD44P16070 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CD44P16070 MIR1254-1-201ENST00000408257 97 ntBASIC0.68□□□□□ -2.3
CD44P16070 MIR4315-1-201ENST00000636800 73 ntBASIC0.68□□□□□ -2.3
CD44P16070 MIR4315-2-201ENST00000640925 73 ntBASIC0.68□□□□□ -2.3
CD44P16070 RNU6-46P-201ENST00000383860 107 ntBASIC0.67□□□□□ -2.3
CD44P16070 RNU6-1340P-201ENST00000384438 107 ntBASIC0.67□□□□□ -2.3
CD44P16070 Y_RNA.355-201ENST00000365462 98 ntBASIC0.66□□□□□ -2.3
CD44P16070 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.66□□□□□ -2.3
CD44P16070 SNORA13-201ENST00000458790 133 ntBASIC0.66□□□□□ -2.3
CD44P16070 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.66□□□□□ -2.3
CD44P16070 RNU6-1324P-201ENST00000384222 107 ntBASIC0.65□□□□□ -2.31
CD44P16070 MIR1276-201ENST00000408707 83 ntBASIC0.65□□□□□ -2.31
CD44P16070 AC018880.2-201ENST00000414265 201 ntBASIC0.65□□□□□ -2.31
CD44P16070 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
CD44P16070 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms