Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
PGK1P00558 RNU6-587P-201ENST00000391282 106 ntBASIC-1.19□□□□□ -2.6
PGK1P00558 MIR4712-201ENST00000583750 82 ntBASIC-1.19□□□□□ -2.6
PGK1P00558 U6.58-201ENST00000613107 107 ntBASIC-1.19□□□□□ -2.6
PGK1P00558 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.2□□□□□ -2.6
PGK1P00558 RNU7-171P-201ENST00000459581 62 ntBASIC-1.2□□□□□ -2.6
PGK1P00558 RNU6-698P-201ENST00000363523 107 ntBASIC-1.21□□□□□ -2.6
PGK1P00558 RNU6-34P-201ENST00000364874 107 ntBASIC-1.21□□□□□ -2.6
PGK1P00558 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.22□□□□□ -2.6
PGK1P00558 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.22□□□□□ -2.6
PGK1P00558 SNORD45A-201ENST00000384512 84 ntBASIC-1.22□□□□□ -2.6
PGK1P00558 MIR1285-2-201ENST00000408311 88 ntBASIC-1.22□□□□□ -2.6
PGK1P00558 RNU6-380P-201ENST00000410207 107 ntBASIC-1.22□□□□□ -2.6
PGK1P00558 RNY4P30-201ENST00000410216 95 ntBASIC-1.22□□□□□ -2.6
PGK1P00558 MIR5683-201ENST00000636514 76 ntBASIC-1.22□□□□□ -2.6
PGK1P00558 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.23□□□□□ -2.61
PGK1P00558 SNORD113.1-201ENST00000363280 73 ntBASIC-1.23□□□□□ -2.61
PGK1P00558 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.23□□□□□ -2.61
PGK1P00558 MIR8053-201ENST00000613344 75 ntBASIC-1.23□□□□□ -2.61
PGK1P00558 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.23□□□□□ -2.61
PGK1P00558 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.24□□□□□ -2.61
PGK1P00558 MTND4LP1-201ENST00000446263 157 ntBASIC-1.25□□□□□ -2.61
PGK1P00558 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.25□□□□□ -2.61
PGK1P00558 RNA5SP180-201ENST00000516181 101 ntBASIC-1.25□□□□□ -2.61
PGK1P00558 MIR4441-201ENST00000582623 100 ntBASIC-1.25□□□□□ -2.61
PGK1P00558 MIR548V-201ENST00000584165 80 ntBASIC-1.25□□□□□ -2.61
PGK1P00558 MIR6874-201ENST00000635894 71 ntBASIC-1.25□□□□□ -2.61
PGK1P00558 MIR1245B-201ENST00000636115 69 ntBASIC-1.25□□□□□ -2.61
PGK1P00558 MIR494-201ENST00000349529 81 ntBASIC-1.26□□□□□ -2.61
PGK1P00558 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.26□□□□□ -2.61
PGK1P00558 MIR889-201ENST00000401280 79 ntBASIC-1.26□□□□□ -2.61
PGK1P00558 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.26□□□□□ -2.61
PGK1P00558 RNU6-598P-201ENST00000364017 105 ntBASIC-1.27□□□□□ -2.61
PGK1P00558 MIR527-201ENST00000385244 85 ntBASIC-1.27□□□□□ -2.61
PGK1P00558 MIR548Q-201ENST00000408404 100 ntBASIC-1.27□□□□□ -2.61
PGK1P00558 AC090616.4-201ENST00000448026 115 ntBASIC-1.27□□□□□ -2.61
PGK1P00558 AC091912.2-201ENST00000624798 167 ntBASIC-1.27□□□□□ -2.61
PGK1P00558 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.27□□□□□ -2.61
PGK1P00558 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.28□□□□□ -2.61
PGK1P00558 MIR630-201ENST00000384957 97 ntBASIC-1.28□□□□□ -2.61
PGK1P00558 MIR520D-201ENST00000385002 87 ntBASIC-1.28□□□□□ -2.61
PGK1P00558 RNU6-696P-201ENST00000390834 107 ntBASIC-1.28□□□□□ -2.61
PGK1P00558 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.28□□□□□ -2.61
PGK1P00558 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.28□□□□□ -2.61
PGK1P00558 U2.18-201ENST00000622185 84 ntBASIC-1.28□□□□□ -2.61
PGK1P00558 RNA5SP215-201ENST00000363440 122 ntBASIC-1.29□□□□□ -2.62
PGK1P00558 RNU6-668P-201ENST00000364180 107 ntBASIC-1.29□□□□□ -2.62
PGK1P00558 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.29□□□□□ -2.62
PGK1P00558 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.3□□□□□ -2.62
PGK1P00558 RNU6-576P-201ENST00000390854 102 ntBASIC-1.3□□□□□ -2.62
PGK1P00558 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.3□□□□□ -2.62
PGK1P00558 RNU6-294P-201ENST00000364999 102 ntBASIC-1.31□□□□□ -2.62
PGK1P00558 MIR450A2-201ENST00000385022 100 ntBASIC-1.31□□□□□ -2.62
PGK1P00558 RNU6-706P-201ENST00000517229 104 ntBASIC-1.31□□□□□ -2.62
PGK1P00558 MIR4490-201ENST00000582647 84 ntBASIC-1.31□□□□□ -2.62
PGK1P00558 MIR429-201ENST00000362106 83 ntBASIC-1.32□□□□□ -2.62
PGK1P00558 RNU6-164P-201ENST00000364604 103 ntBASIC-1.32□□□□□ -2.62
PGK1P00558 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.32□□□□□ -2.62
PGK1P00558 RNU6-630P-201ENST00000391258 106 ntBASIC-1.32□□□□□ -2.62
PGK1P00558 MIR4666B-201ENST00000578142 81 ntBASIC-1.32□□□□□ -2.62
PGK1P00558 RNU6-608P-201ENST00000383927 104 ntBASIC-1.33□□□□□ -2.62
PGK1P00558 SNORD116-24-201ENST00000384549 92 ntBASIC-1.33□□□□□ -2.62
PGK1P00558 SNORD113-2-201ENST00000391082 72 ntBASIC-1.33□□□□□ -2.62
PGK1P00558 RNU6-787P-201ENST00000384032 107 ntBASIC-1.34□□□□□ -2.62
PGK1P00558 RNU6-242P-201ENST00000384359 107 ntBASIC-1.34□□□□□ -2.62
PGK1P00558 SNORD116-16-201ENST00000384533 92 ntBASIC-1.34□□□□□ -2.62
PGK1P00558 MIR5582-201ENST00000579697 68 ntBASIC-1.34□□□□□ -2.62
PGK1P00558 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.35□□□□□ -2.63
PGK1P00558 SNORA41B-201ENST00000384785 128 ntBASIC-1.35□□□□□ -2.63
PGK1P00558 RNU6-70P-201ENST00000516438 60 ntBASIC-1.35□□□□□ -2.63
PGK1P00558 SNORD115-31-201ENST00000365318 82 ntBASIC-1.36□□□□□ -2.63
PGK1P00558 MIR3134-201ENST00000579433 74 ntBASIC-1.36□□□□□ -2.63
PGK1P00558 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.37□□□□□ -2.63
PGK1P00558 MIR154-201ENST00000385243 84 ntBASIC-1.37□□□□□ -2.63
PGK1P00558 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.37□□□□□ -2.63
PGK1P00558 RNY4P27-201ENST00000363341 96 ntBASIC-1.38□□□□□ -2.63
PGK1P00558 RNU6-226P-201ENST00000363778 107 ntBASIC-1.38□□□□□ -2.63
PGK1P00558 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.38□□□□□ -2.63
PGK1P00558 AC062037.1-201ENST00000605302 128 ntBASIC-1.38□□□□□ -2.63
PGK1P00558 RNA5SP173-201ENST00000364857 136 ntBASIC-1.39□□□□□ -2.63
PGK1P00558 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.39□□□□□ -2.63
PGK1P00558 HLA-S-202ENST00000425174 53 ntBASIC-1.39□□□□□ -2.63
PGK1P00558 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.39□□□□□ -2.63
PGK1P00558 MIR6502-201ENST00000617296 76 ntBASIC-1.39□□□□□ -2.63
PGK1P00558 SNORD1B-201ENST00000363091 84 ntBASIC-1.4□□□□□ -2.63
PGK1P00558 RNU6-258P-201ENST00000390884 101 ntBASIC-1.4□□□□□ -2.63
PGK1P00558 RNU6-687P-201ENST00000516443 89 ntBASIC-1.4□□□□□ -2.63
PGK1P00558 MIR4520-1-201ENST00000582609 70 ntBASIC-1.4□□□□□ -2.63
PGK1P00558 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.41□□□□□ -2.64
PGK1P00558 AC138207.3-201ENST00000585289 166 ntBASIC-1.41□□□□□ -2.64
PGK1P00558 RNU6-895P-201ENST00000384125 103 ntBASIC-1.42□□□□□ -2.64
PGK1P00558 MIR3170-201ENST00000582699 77 ntBASIC-1.42□□□□□ -2.64
PGK1P00558 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.43□□□□□ -2.64
PGK1P00558 MIR5591-201ENST00000578248 65 ntBASIC-1.43□□□□□ -2.64
PGK1P00558 RNU6-820P-201ENST00000384273 107 ntBASIC-1.44□□□□□ -2.64
PGK1P00558 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.46□□□□□ -2.64
PGK1P00558 AC018880.2-201ENST00000414265 201 ntBASIC-1.46□□□□□ -2.64
PGK1P00558 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.46□□□□□ -2.64
PGK1P00558 MIR1246-201ENST00000636535 73 ntBASIC-1.46□□□□□ -2.64
PGK1P00558 RNU6-563P-201ENST00000364872 108 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms