Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 SNORD116-16-201ENST00000384533 92 ntBASIC-0.43□□□□□ -2.48
PRPF40AO75400 RNA5SP192-201ENST00000364404 120 ntBASIC-0.44□□□□□ -2.48
PRPF40AO75400 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
PRPF40AO75400 SNORA32.3-201ENST00000384772 121 ntBASIC-0.44□□□□□ -2.48
PRPF40AO75400 SNORA41B-201ENST00000384785 128 ntBASIC-0.44□□□□□ -2.48
PRPF40AO75400 SNORD14C-201ENST00000365382 88 ntBASIC-0.45□□□□□ -2.48
PRPF40AO75400 MIR518B-201ENST00000385127 83 ntBASIC-0.45□□□□□ -2.48
PRPF40AO75400 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
PRPF40AO75400 SNORD60.1-201ENST00000362451 73 ntBASIC-0.46□□□□□ -2.48
PRPF40AO75400 SNORD74.6-201ENST00000364796 70 ntBASIC-0.46□□□□□ -2.48
PRPF40AO75400 RNU6-246P-201ENST00000384702 107 ntBASIC-0.46□□□□□ -2.48
PRPF40AO75400 MIR224-201ENST00000384889 81 ntBASIC-0.46□□□□□ -2.48
PRPF40AO75400 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.47□□□□□ -2.48
PRPF40AO75400 SNORA13-201ENST00000458790 133 ntBASIC-0.47□□□□□ -2.48
PRPF40AO75400 SNORD126-201ENST00000459475 77 ntBASIC-0.47□□□□□ -2.48
PRPF40AO75400 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
PRPF40AO75400 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
PRPF40AO75400 RNA5SP25-201ENST00000410815 110 ntBASIC-0.48□□□□□ -2.49
PRPF40AO75400 SNORD18.2-201ENST00000459604 70 ntBASIC-0.48□□□□□ -2.49
PRPF40AO75400 RNU6-940P-201ENST00000363433 104 ntBASIC-0.49□□□□□ -2.49
PRPF40AO75400 RNU6-30P-201ENST00000384561 107 ntBASIC-0.49□□□□□ -2.49
PRPF40AO75400 RPS29P8-201ENST00000445109 171 ntBASIC-0.49□□□□□ -2.49
PRPF40AO75400 SNORD95.1-201ENST00000364099 68 ntBASIC-0.5□□□□□ -2.49
PRPF40AO75400 AC110620.1-201ENST00000416042 228 ntBASIC-0.5□□□□□ -2.49
PRPF40AO75400 SNORD22.1-201ENST00000516331 125 ntBASIC-0.5□□□□□ -2.49
PRPF40AO75400 RNA5SP476-201ENST00000516613 103 ntBASIC-0.5□□□□□ -2.49
PRPF40AO75400 RNU6-122P-201ENST00000516818 107 ntBASIC-0.5□□□□□ -2.49
PRPF40AO75400 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.51□□□□□ -2.49
PRPF40AO75400 RNU6-284P-201ENST00000411105 106 ntBASIC-0.51□□□□□ -2.49
PRPF40AO75400 snoU13.19-201ENST00000459148 104 ntBASIC-0.51□□□□□ -2.49
PRPF40AO75400 HAR1A.1-201ENST00000459583 118 ntBASIC-0.51□□□□□ -2.49
PRPF40AO75400 RNU7-88P-201ENST00000458752 63 ntBASIC-0.52□□□□□ -2.49
PRPF40AO75400 SNORD75.1-201ENST00000408373 60 ntBASIC-0.53□□□□□ -2.49
PRPF40AO75400 U7.5-201ENST00000517224 61 ntBASIC-0.53□□□□□ -2.49
PRPF40AO75400 MIR3179-1-201ENST00000578940 84 ntBASIC-0.53□□□□□ -2.49
PRPF40AO75400 MIR3179-2-201ENST00000579107 84 ntBASIC-0.53□□□□□ -2.49
PRPF40AO75400 MIR3179-3-201ENST00000579566 84 ntBASIC-0.53□□□□□ -2.49
PRPF40AO75400 MIR4436A-201ENST00000585278 85 ntBASIC-0.53□□□□□ -2.49
PRPF40AO75400 MIR3179-4-201ENST00000617599 84 ntBASIC-0.53□□□□□ -2.49
PRPF40AO75400 SNORD114-15-201ENST00000364687 72 ntBASIC-0.54□□□□□ -2.5
PRPF40AO75400 RNU4-63P-201ENST00000411313 118 ntBASIC-0.54□□□□□ -2.5
PRPF40AO75400 RNU6-788P-201ENST00000390967 104 ntBASIC-0.55□□□□□ -2.5
PRPF40AO75400 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
PRPF40AO75400 RNU6-721P-201ENST00000410155 105 ntBASIC-0.56□□□□□ -2.5
PRPF40AO75400 RNU6-669P-201ENST00000365575 107 ntBASIC-0.57□□□□□ -2.5
PRPF40AO75400 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.57□□□□□ -2.5
PRPF40AO75400 AC021146.6-201ENST00000514659 117 ntBASIC-0.57□□□□□ -2.5
PRPF40AO75400 MIR466-201ENST00000580653 84 ntBASIC-0.57□□□□□ -2.5
PRPF40AO75400 RNU6-696P-201ENST00000390834 107 ntBASIC-0.58□□□□□ -2.5
PRPF40AO75400 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.59□□□□□ -2.5
PRPF40AO75400 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.6□□□□□ -2.51
PRPF40AO75400 AP000533.3-201ENST00000447704 118 ntBASIC-0.6□□□□□ -2.51
PRPF40AO75400 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.61□□□□□ -2.51
PRPF40AO75400 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.61□□□□□ -2.51
PRPF40AO75400 SNORD1B-201ENST00000363091 84 ntBASIC-0.62□□□□□ -2.51
PRPF40AO75400 RNU6-598P-201ENST00000364017 105 ntBASIC-0.62□□□□□ -2.51
PRPF40AO75400 MT-TQ-201ENST00000387372 72 ntBASIC-0.62□□□□□ -2.51
PRPF40AO75400 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
PRPF40AO75400 RNA5SP67-201ENST00000516422 131 ntBASIC-0.63□□□□□ -2.51
PRPF40AO75400 RNU6-732P-201ENST00000516033 103 ntBASIC-0.64□□□□□ -2.51
PRPF40AO75400 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.64□□□□□ -2.51
PRPF40AO75400 MIR548AX-201ENST00000580117 73 ntBASIC-0.64□□□□□ -2.51
PRPF40AO75400 MIR3938-201ENST00000582157 103 ntBASIC-0.65□□□□□ -2.51
PRPF40AO75400 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.66□□□□□ -2.52
PRPF40AO75400 RNU6-172P-201ENST00000411000 93 ntBASIC-0.66□□□□□ -2.52
PRPF40AO75400 SNORD63.1-201ENST00000516178 80 ntBASIC-0.66□□□□□ -2.52
PRPF40AO75400 MIR3681-201ENST00000580089 72 ntBASIC-0.66□□□□□ -2.52
PRPF40AO75400 U2.18-201ENST00000622185 84 ntBASIC-0.66□□□□□ -2.52
PRPF40AO75400 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.67□□□□□ -2.52
PRPF40AO75400 RNU6-231P-201ENST00000517122 103 ntBASIC-0.68□□□□□ -2.52
PRPF40AO75400 RNU7-119P-201ENST00000459279 63 ntBASIC-0.69□□□□□ -2.52
PRPF40AO75400 MIR7110-201ENST00000612638 86 ntBASIC-0.7□□□□□ -2.52
PRPF40AO75400 SNORD114-17-201ENST00000364699 75 ntBASIC-0.71□□□□□ -2.52
PRPF40AO75400 MIR548AA1-201ENST00000384971 97 ntBASIC-0.71□□□□□ -2.52
PRPF40AO75400 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
PRPF40AO75400 SNORD57-201ENST00000448188 72 ntBASIC-0.71□□□□□ -2.52
PRPF40AO75400 SNORA26.4-201ENST00000391188 123 ntBASIC-0.72□□□□□ -2.52
PRPF40AO75400 RNU6-995P-201ENST00000391244 107 ntBASIC-0.72□□□□□ -2.52
PRPF40AO75400 MIR548Q-201ENST00000408404 100 ntBASIC-0.72□□□□□ -2.52
PRPF40AO75400 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.72□□□□□ -2.52
PRPF40AO75400 SNORD116.2-201ENST00000391251 93 ntBASIC-0.73□□□□□ -2.53
PRPF40AO75400 SNORD114-25-201ENST00000363742 72 ntBASIC-0.74□□□□□ -2.53
PRPF40AO75400 MIR409-201ENST00000362237 79 ntBASIC-0.75□□□□□ -2.53
PRPF40AO75400 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.76□□□□□ -2.53
PRPF40AO75400 SNORD115-33-201ENST00000363723 82 ntBASIC-0.76□□□□□ -2.53
PRPF40AO75400 AL353691.2-201ENST00000443795 59 ntBASIC-0.76□□□□□ -2.53
PRPF40AO75400 RNU6-431P-201ENST00000383874 107 ntBASIC-0.77□□□□□ -2.53
PRPF40AO75400 RNY1P9-201ENST00000532431 109 ntBASIC-0.77□□□□□ -2.53
PRPF40AO75400 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.77□□□□□ -2.53
PRPF40AO75400 RNU6-520P-201ENST00000384717 104 ntBASIC-0.78□□□□□ -2.53
PRPF40AO75400 MIR579-201ENST00000385221 98 ntBASIC-0.79□□□□□ -2.54
PRPF40AO75400 SNORD64-201ENST00000386683 67 ntBASIC-0.79□□□□□ -2.54
PRPF40AO75400 RNU7-151P-201ENST00000516930 53 ntBASIC-0.79□□□□□ -2.54
PRPF40AO75400 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.8□□□□□ -2.54
PRPF40AO75400 RNA5SP266-201ENST00000410273 108 ntBASIC-0.8□□□□□ -2.54
PRPF40AO75400 SCARNA17-201ENST00000516183 144 ntBASIC-0.81□□□□□ -2.54
PRPF40AO75400 MIR587-201ENST00000384845 96 ntBASIC-0.82□□□□□ -2.54
PRPF40AO75400 MIR147A-201ENST00000385079 72 ntBASIC-0.82□□□□□ -2.54
PRPF40AO75400 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.82□□□□□ -2.54
PRPF40AO75400 AL500527.2-201ENST00000454105 95 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms