Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNA5SP215-201ENST00000363440 122 ntBASIC-1.35□□□□□ -2.63
SNX3O60493 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.35□□□□□ -2.63
SNX3O60493 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.35□□□□□ -2.63
SNX3O60493 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.36□□□□□ -2.63
SNX3O60493 MIR630-201ENST00000384957 97 ntBASIC-1.36□□□□□ -2.63
SNX3O60493 MIR8485-201ENST00000401372 91 ntBASIC-1.36□□□□□ -2.63
SNX3O60493 RNU6-70P-201ENST00000516438 60 ntBASIC-1.36□□□□□ -2.63
SNX3O60493 RNU6-706P-201ENST00000517229 104 ntBASIC-1.36□□□□□ -2.63
SNX3O60493 AP002795.1-201ENST00000534879 84 ntBASIC-1.36□□□□□ -2.63
SNX3O60493 MIR4666B-201ENST00000578142 81 ntBASIC-1.36□□□□□ -2.63
SNX3O60493 MIR429-201ENST00000362106 83 ntBASIC-1.38□□□□□ -2.63
SNX3O60493 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.38□□□□□ -2.63
SNX3O60493 SNORD57-201ENST00000448188 72 ntBASIC-1.38□□□□□ -2.63
SNX3O60493 RNU7-134P-201ENST00000458997 64 ntBASIC-1.38□□□□□ -2.63
SNX3O60493 HAR1A.1-201ENST00000459583 118 ntBASIC-1.38□□□□□ -2.63
SNX3O60493 MIR5683-201ENST00000636514 76 ntBASIC-1.38□□□□□ -2.63
SNX3O60493 MIR409-201ENST00000362237 79 ntBASIC-1.39□□□□□ -2.63
SNX3O60493 MIR154-201ENST00000385243 84 ntBASIC-1.39□□□□□ -2.63
SNX3O60493 RNU6-820P-201ENST00000384273 107 ntBASIC-1.4□□□□□ -2.63
SNX3O60493 MIR29B1-201ENST00000385015 81 ntBASIC-1.4□□□□□ -2.63
SNX3O60493 MIR507-201ENST00000385234 94 ntBASIC-1.4□□□□□ -2.63
SNX3O60493 RNU6-696P-201ENST00000390834 107 ntBASIC-1.4□□□□□ -2.63
SNX3O60493 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.4□□□□□ -2.63
SNX3O60493 RNU6-787P-201ENST00000384032 107 ntBASIC-1.41□□□□□ -2.64
SNX3O60493 MIR548Q-201ENST00000408404 100 ntBASIC-1.41□□□□□ -2.64
SNX3O60493 RNA5SP461-201ENST00000516451 104 ntBASIC-1.41□□□□□ -2.64
SNX3O60493 MIR4490-201ENST00000582647 84 ntBASIC-1.41□□□□□ -2.64
SNX3O60493 MIR6818-201ENST00000621576 65 ntBASIC-1.41□□□□□ -2.64
SNX3O60493 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.42□□□□□ -2.64
SNX3O60493 SNORD113-2-201ENST00000391082 72 ntBASIC-1.42□□□□□ -2.64
SNX3O60493 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.42□□□□□ -2.64
SNX3O60493 AC062037.1-201ENST00000605302 128 ntBASIC-1.42□□□□□ -2.64
SNX3O60493 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.43□□□□□ -2.64
SNX3O60493 MIR3134-201ENST00000579433 74 ntBASIC-1.43□□□□□ -2.64
SNX3O60493 MIR4320-201ENST00000636981 65 ntBASIC-1.43□□□□□ -2.64
SNX3O60493 RNA5SP26-201ENST00000362406 119 ntBASIC-1.44□□□□□ -2.64
SNX3O60493 RNU6-895P-201ENST00000384125 103 ntBASIC-1.44□□□□□ -2.64
SNX3O60493 HLA-S-202ENST00000425174 53 ntBASIC-1.44□□□□□ -2.64
SNX3O60493 RNU6-598P-201ENST00000364017 105 ntBASIC-1.45□□□□□ -2.64
SNX3O60493 RNA5SP266-201ENST00000410273 108 ntBASIC-1.45□□□□□ -2.64
SNX3O60493 RNA5SP173-201ENST00000364857 136 ntBASIC-1.46□□□□□ -2.64
SNX3O60493 SNORD115-31-201ENST00000365318 82 ntBASIC-1.46□□□□□ -2.64
SNX3O60493 SNORD116-24-201ENST00000384549 92 ntBASIC-1.46□□□□□ -2.64
SNX3O60493 RNU6-226P-201ENST00000363778 107 ntBASIC-1.47□□□□□ -2.64
SNX3O60493 AC138207.3-201ENST00000585289 166 ntBASIC-1.47□□□□□ -2.64
SNX3O60493 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.47□□□□□ -2.64
SNX3O60493 SNORD116-16-201ENST00000384533 92 ntBASIC-1.48□□□□□ -2.65
SNX3O60493 MIR5591-201ENST00000578248 65 ntBASIC-1.48□□□□□ -2.65
SNX3O60493 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.49□□□□□ -2.65
SNX3O60493 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.49□□□□□ -2.65
SNX3O60493 RNU6-687P-201ENST00000516443 89 ntBASIC-1.49□□□□□ -2.65
SNX3O60493 RNA5SP170-201ENST00000517150 101 ntBASIC-1.49□□□□□ -2.65
SNX3O60493 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.5□□□□□ -2.65
SNX3O60493 SNORA41B-201ENST00000384785 128 ntBASIC-1.5□□□□□ -2.65
SNX3O60493 MIR889-201ENST00000401280 79 ntBASIC-1.5□□□□□ -2.65
SNX3O60493 RPL35AP4-201ENST00000412007 102 ntBASIC-1.5□□□□□ -2.65
SNX3O60493 U2.18-201ENST00000622185 84 ntBASIC-1.5□□□□□ -2.65
SNX3O60493 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.5□□□□□ -2.65
SNX3O60493 RNU6-576P-201ENST00000390854 102 ntBASIC-1.51□□□□□ -2.65
SNX3O60493 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.53□□□□□ -2.65
SNX3O60493 RNU6-630P-201ENST00000391258 106 ntBASIC-1.53□□□□□ -2.65
SNX3O60493 RNU6-411P-201ENST00000384451 107 ntBASIC-1.54□□□□□ -2.66
SNX3O60493 SNORD73B-201ENST00000364394 72 ntBASIC-1.55□□□□□ -2.66
SNX3O60493 U7.4-201ENST00000614961 63 ntBASIC-1.55□□□□□ -2.66
SNX3O60493 AC090616.4-201ENST00000448026 115 ntBASIC-1.56□□□□□ -2.66
SNX3O60493 MIR4520-1-201ENST00000582609 70 ntBASIC-1.56□□□□□ -2.66
SNX3O60493 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.57□□□□□ -2.66
SNX3O60493 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.57□□□□□ -2.66
SNX3O60493 SNORD1B-201ENST00000363091 84 ntBASIC-1.58□□□□□ -2.66
SNX3O60493 RNU6-164P-201ENST00000364604 103 ntBASIC-1.58□□□□□ -2.66
SNX3O60493 MIR4770-201ENST00000579149 58 ntBASIC-1.58□□□□□ -2.66
SNX3O60493 MIR548AA1-201ENST00000384971 97 ntBASIC-1.59□□□□□ -2.66
SNX3O60493 RNU6-542P-201ENST00000516405 103 ntBASIC-1.59□□□□□ -2.66
SNX3O60493 MIR6502-201ENST00000617296 76 ntBASIC-1.59□□□□□ -2.66
SNX3O60493 MIR520D-201ENST00000385002 87 ntBASIC-1.6□□□□□ -2.67
SNX3O60493 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.6□□□□□ -2.67
SNX3O60493 MIR3202-2-201ENST00000635980 79 ntBASIC-1.6□□□□□ -2.67
SNX3O60493 RNU6-608P-201ENST00000383927 104 ntBASIC-1.61□□□□□ -2.67
SNX3O60493 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.61□□□□□ -2.67
SNX3O60493 MIR1246-201ENST00000636535 73 ntBASIC-1.61□□□□□ -2.67
SNX3O60493 RNU6-573P-201ENST00000383938 106 ntBASIC-1.62□□□□□ -2.67
SNX3O60493 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.62□□□□□ -2.67
SNX3O60493 RNA5SP180-201ENST00000516181 101 ntBASIC-1.62□□□□□ -2.67
SNX3O60493 RNY4P29-201ENST00000410801 97 ntBASIC-1.63□□□□□ -2.67
SNX3O60493 RNU6-634P-201ENST00000459134 106 ntBASIC-1.63□□□□□ -2.67
SNX3O60493 MIR3170-201ENST00000582699 77 ntBASIC-1.63□□□□□ -2.67
SNX3O60493 AC091912.2-201ENST00000624798 167 ntBASIC-1.63□□□□□ -2.67
SNX3O60493 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.64□□□□□ -2.67
SNX3O60493 SNORA26.2-201ENST00000390922 122 ntBASIC-1.64□□□□□ -2.67
SNX3O60493 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.64□□□□□ -2.67
SNX3O60493 SNX3P1X-201ENST00000414887 175 ntBASIC-1.64□□□□□ -2.67
SNX3O60493 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.65□□□□□ -2.67
SNX3O60493 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.65□□□□□ -2.67
SNX3O60493 RNU6-540P-201ENST00000384622 101 ntBASIC-1.65□□□□□ -2.67
SNX3O60493 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.65□□□□□ -2.67
SNX3O60493 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.65□□□□□ -2.67
SNX3O60493 MIR6874-201ENST00000635894 71 ntBASIC-1.65□□□□□ -2.67
SNX3O60493 MIR198-201ENST00000637333 62 ntBASIC-1.65□□□□□ -2.67
SNX3O60493 RNA5SP331-201ENST00000364986 107 ntBASIC-1.66□□□□□ -2.68
SNX3O60493 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 295.4 ms