Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC021146.6-201ENST00000514659 117 ntBASIC-0.6□□□□□ -2.51
KDM1AO60341 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.61□□□□□ -2.51
KDM1AO60341 RNU6-458P-201ENST00000384179 107 ntBASIC-0.62□□□□□ -2.51
KDM1AO60341 RNU6-246P-201ENST00000384702 107 ntBASIC-0.62□□□□□ -2.51
KDM1AO60341 SNORD18.2-201ENST00000459604 70 ntBASIC-0.62□□□□□ -2.51
KDM1AO60341 AC114801.3-201ENST00000510231 177 ntBASIC-0.62□□□□□ -2.51
KDM1AO60341 U6.58-201ENST00000613107 107 ntBASIC-0.62□□□□□ -2.51
KDM1AO60341 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.63□□□□□ -2.51
KDM1AO60341 RNU6-800P-201ENST00000384473 103 ntBASIC-0.64□□□□□ -2.51
KDM1AO60341 MIR224-201ENST00000384889 81 ntBASIC-0.64□□□□□ -2.51
KDM1AO60341 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.64□□□□□ -2.51
KDM1AO60341 SNORD114-14-201ENST00000362723 75 ntBASIC-0.65□□□□□ -2.51
KDM1AO60341 RNU6-92P-201ENST00000605893 104 ntBASIC-0.65□□□□□ -2.51
KDM1AO60341 SNORD116-16-201ENST00000384533 92 ntBASIC-0.66□□□□□ -2.52
KDM1AO60341 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
KDM1AO60341 AP000533.3-201ENST00000447704 118 ntBASIC-0.66□□□□□ -2.52
KDM1AO60341 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.67□□□□□ -2.52
KDM1AO60341 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
KDM1AO60341 AC103706.3-201ENST00000636297 85 ntBASIC-0.67□□□□□ -2.52
KDM1AO60341 MIR6086-201ENST00000638065 55 ntBASIC-0.67□□□□□ -2.52
KDM1AO60341 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.68□□□□□ -2.52
KDM1AO60341 RNU6-721P-201ENST00000410155 105 ntBASIC-0.68□□□□□ -2.52
KDM1AO60341 MIR3681-201ENST00000580089 72 ntBASIC-0.68□□□□□ -2.52
KDM1AO60341 MIR4511-201ENST00000582784 87 ntBASIC-0.68□□□□□ -2.52
KDM1AO60341 SNORA41B-201ENST00000384785 128 ntBASIC-0.69□□□□□ -2.52
KDM1AO60341 RNU4-63P-201ENST00000411313 118 ntBASIC-0.7□□□□□ -2.52
KDM1AO60341 U7.5-201ENST00000517224 61 ntBASIC-0.7□□□□□ -2.52
KDM1AO60341 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.71□□□□□ -2.52
KDM1AO60341 RNA5SP25-201ENST00000410815 110 ntBASIC-0.71□□□□□ -2.52
KDM1AO60341 RNU7-88P-201ENST00000458752 63 ntBASIC-0.71□□□□□ -2.52
KDM1AO60341 SNORD95.1-201ENST00000364099 68 ntBASIC-0.72□□□□□ -2.52
KDM1AO60341 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.72□□□□□ -2.52
KDM1AO60341 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.73□□□□□ -2.53
KDM1AO60341 SNORA25.5-201ENST00000363782 126 ntBASIC-0.74□□□□□ -2.53
KDM1AO60341 RNU6-732P-201ENST00000516033 103 ntBASIC-0.74□□□□□ -2.53
KDM1AO60341 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.74□□□□□ -2.53
KDM1AO60341 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.75□□□□□ -2.53
KDM1AO60341 RNU6-696P-201ENST00000390834 107 ntBASIC-0.75□□□□□ -2.53
KDM1AO60341 SNORD60.1-201ENST00000362451 73 ntBASIC-0.76□□□□□ -2.53
KDM1AO60341 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.76□□□□□ -2.53
KDM1AO60341 MT-TQ-201ENST00000387372 72 ntBASIC-0.77□□□□□ -2.53
KDM1AO60341 MIR196A1-201ENST00000388006 70 ntBASIC-0.77□□□□□ -2.53
KDM1AO60341 SNORD114-15-201ENST00000364687 72 ntBASIC-0.78□□□□□ -2.53
KDM1AO60341 SNORD114-17-201ENST00000364699 75 ntBASIC-0.78□□□□□ -2.53
KDM1AO60341 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
KDM1AO60341 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.78□□□□□ -2.53
KDM1AO60341 RNA5SP192-201ENST00000364404 120 ntBASIC-0.79□□□□□ -2.54
KDM1AO60341 RNU6-30P-201ENST00000384561 107 ntBASIC-0.79□□□□□ -2.54
KDM1AO60341 SNORA26.4-201ENST00000391188 123 ntBASIC-0.79□□□□□ -2.54
KDM1AO60341 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.79□□□□□ -2.54
KDM1AO60341 RNU6-598P-201ENST00000364017 105 ntBASIC-0.8□□□□□ -2.54
KDM1AO60341 RNU6-471P-201ENST00000383944 106 ntBASIC-0.8□□□□□ -2.54
KDM1AO60341 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.8□□□□□ -2.54
KDM1AO60341 RNU6-122P-201ENST00000516818 107 ntBASIC-0.8□□□□□ -2.54
KDM1AO60341 SNORD1B-201ENST00000363091 84 ntBASIC-0.81□□□□□ -2.54
KDM1AO60341 AL500527.2-201ENST00000454105 95 ntBASIC-0.81□□□□□ -2.54
KDM1AO60341 SNORD115-33-201ENST00000363723 82 ntBASIC-0.82□□□□□ -2.54
KDM1AO60341 snoU13.19-201ENST00000459148 104 ntBASIC-0.82□□□□□ -2.54
KDM1AO60341 SNORD63.1-201ENST00000516178 80 ntBASIC-0.82□□□□□ -2.54
KDM1AO60341 SNORD57-201ENST00000448188 72 ntBASIC-0.84□□□□□ -2.54
KDM1AO60341 RNA5SP476-201ENST00000516613 103 ntBASIC-0.84□□□□□ -2.54
KDM1AO60341 RNU6-940P-201ENST00000363433 104 ntBASIC-0.85□□□□□ -2.55
KDM1AO60341 RNU6-590P-201ENST00000365039 107 ntBASIC-0.85□□□□□ -2.55
KDM1AO60341 AL353691.2-201ENST00000443795 59 ntBASIC-0.85□□□□□ -2.55
KDM1AO60341 U2.18-201ENST00000622185 84 ntBASIC-0.85□□□□□ -2.55
KDM1AO60341 SNORD114-25-201ENST00000363742 72 ntBASIC-0.86□□□□□ -2.55
KDM1AO60341 AC110620.1-201ENST00000416042 228 ntBASIC-0.87□□□□□ -2.55
KDM1AO60341 SCARNA17-201ENST00000516183 144 ntBASIC-0.87□□□□□ -2.55
KDM1AO60341 MIR548AX-201ENST00000580117 73 ntBASIC-0.87□□□□□ -2.55
KDM1AO60341 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.87□□□□□ -2.55
KDM1AO60341 RNU6-669P-201ENST00000365575 107 ntBASIC-0.89□□□□□ -2.55
KDM1AO60341 SNORD83B-201ENST00000386745 93 ntBASIC-0.89□□□□□ -2.55
KDM1AO60341 RNU6-172P-201ENST00000411000 93 ntBASIC-0.89□□□□□ -2.55
KDM1AO60341 HAR1A.1-201ENST00000459583 118 ntBASIC-0.89□□□□□ -2.55
KDM1AO60341 SNORD19-201ENST00000391191 68 ntBASIC-0.9□□□□□ -2.55
KDM1AO60341 MIR548AA1-201ENST00000384971 97 ntBASIC-0.91□□□□□ -2.56
KDM1AO60341 MIR548Q-201ENST00000408404 100 ntBASIC-0.92□□□□□ -2.56
KDM1AO60341 RNU6-231P-201ENST00000517122 103 ntBASIC-0.92□□□□□ -2.56
KDM1AO60341 MIR4499-201ENST00000584834 69 ntBASIC-0.92□□□□□ -2.56
KDM1AO60341 MIR147A-201ENST00000385079 72 ntBASIC-0.93□□□□□ -2.56
KDM1AO60341 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.93□□□□□ -2.56
KDM1AO60341 RNA5SP67-201ENST00000516422 131 ntBASIC-0.94□□□□□ -2.56
KDM1AO60341 MIR466-201ENST00000580653 84 ntBASIC-0.94□□□□□ -2.56
KDM1AO60341 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.95□□□□□ -2.56
KDM1AO60341 MIR7110-201ENST00000612638 86 ntBASIC-0.95□□□□□ -2.56
KDM1AO60341 MIR5683-201ENST00000636514 76 ntBASIC-0.95□□□□□ -2.56
KDM1AO60341 RNU6-431P-201ENST00000383874 107 ntBASIC-0.96□□□□□ -2.56
KDM1AO60341 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.96□□□□□ -2.56
KDM1AO60341 RNU6-995P-201ENST00000391244 107 ntBASIC-0.96□□□□□ -2.56
KDM1AO60341 AC125388.1-201ENST00000459631 156 ntBASIC-0.96□□□□□ -2.56
KDM1AO60341 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.96□□□□□ -2.56
KDM1AO60341 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.97□□□□□ -2.56
KDM1AO60341 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
KDM1AO60341 AC139453.2-201ENST00000487255 133 ntBASIC-0.98□□□□□ -2.57
KDM1AO60341 RNU7-151P-201ENST00000516930 53 ntBASIC-0.98□□□□□ -2.57
KDM1AO60341 AP002795.1-201ENST00000534879 84 ntBASIC-0.98□□□□□ -2.57
KDM1AO60341 MIR378F-201ENST00000578143 78 ntBASIC-0.98□□□□□ -2.57
KDM1AO60341 MIR3938-201ENST00000582157 103 ntBASIC-0.98□□□□□ -2.57
KDM1AO60341 MIR4490-201ENST00000582647 84 ntBASIC-0.98□□□□□ -2.57
KDM1AO60341 SNORD64-201ENST00000386683 67 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 351.6 ms