Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
LDB2O43679 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.56□□□□□ -2.5
LDB2O43679 AP000533.3-201ENST00000447704 118 ntBASIC-0.56□□□□□ -2.5
LDB2O43679 RNA5SP368-201ENST00000364298 116 ntBASIC-0.57□□□□□ -2.5
LDB2O43679 RNU6-458P-201ENST00000384179 107 ntBASIC-0.57□□□□□ -2.5
LDB2O43679 RNU6-246P-201ENST00000384702 107 ntBASIC-0.57□□□□□ -2.5
LDB2O43679 RNU6-721P-201ENST00000410155 105 ntBASIC-0.57□□□□□ -2.5
LDB2O43679 U6.58-201ENST00000613107 107 ntBASIC-0.57□□□□□ -2.5
LDB2O43679 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.58□□□□□ -2.5
LDB2O43679 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.58□□□□□ -2.5
LDB2O43679 MIR548AZ-201ENST00000616567 95 ntBASIC-0.58□□□□□ -2.5
LDB2O43679 U6.111-201ENST00000636093 83 ntBASIC-0.58□□□□□ -2.5
LDB2O43679 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.59□□□□□ -2.5
LDB2O43679 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
LDB2O43679 RNA5SP25-201ENST00000410815 110 ntBASIC-0.59□□□□□ -2.5
LDB2O43679 MIR4436A-201ENST00000585278 85 ntBASIC-0.6□□□□□ -2.51
LDB2O43679 SNORD116-16-201ENST00000384533 92 ntBASIC-0.61□□□□□ -2.51
LDB2O43679 AC005520.4-201ENST00000604337 90 ntBASIC-0.61□□□□□ -2.51
LDB2O43679 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.62□□□□□ -2.51
LDB2O43679 SNORD95.1-201ENST00000364099 68 ntBASIC-0.62□□□□□ -2.51
LDB2O43679 U7.5-201ENST00000517224 61 ntBASIC-0.62□□□□□ -2.51
LDB2O43679 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.63□□□□□ -2.51
LDB2O43679 RNU6-92P-201ENST00000605893 104 ntBASIC-0.63□□□□□ -2.51
LDB2O43679 SNORA32.3-201ENST00000384772 121 ntBASIC-0.64□□□□□ -2.51
LDB2O43679 SNORA41B-201ENST00000384785 128 ntBASIC-0.64□□□□□ -2.51
LDB2O43679 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
LDB2O43679 RNU7-88P-201ENST00000458752 63 ntBASIC-0.64□□□□□ -2.51
LDB2O43679 RPS29P8-201ENST00000445109 171 ntBASIC-0.65□□□□□ -2.51
LDB2O43679 SNORD114-17-201ENST00000364699 75 ntBASIC-0.66□□□□□ -2.52
LDB2O43679 RNU6-800P-201ENST00000384473 103 ntBASIC-0.66□□□□□ -2.52
LDB2O43679 AC114801.3-201ENST00000510231 177 ntBASIC-0.66□□□□□ -2.52
LDB2O43679 RNU6-732P-201ENST00000516033 103 ntBASIC-0.66□□□□□ -2.52
LDB2O43679 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.66□□□□□ -2.52
LDB2O43679 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.66□□□□□ -2.52
LDB2O43679 AC103706.3-201ENST00000636297 85 ntBASIC-0.66□□□□□ -2.52
LDB2O43679 RNU6-696P-201ENST00000390834 107 ntBASIC-0.67□□□□□ -2.52
LDB2O43679 SNORA26.4-201ENST00000391188 123 ntBASIC-0.67□□□□□ -2.52
LDB2O43679 MIR4511-201ENST00000582784 87 ntBASIC-0.67□□□□□ -2.52
LDB2O43679 SNORD115-33-201ENST00000363723 82 ntBASIC-0.68□□□□□ -2.52
LDB2O43679 MIR224-201ENST00000384889 81 ntBASIC-0.69□□□□□ -2.52
LDB2O43679 SNORA25.5-201ENST00000363782 126 ntBASIC-0.7□□□□□ -2.52
LDB2O43679 snoU13.19-201ENST00000459148 104 ntBASIC-0.7□□□□□ -2.52
LDB2O43679 RNU6-598P-201ENST00000364017 105 ntBASIC-0.71□□□□□ -2.52
LDB2O43679 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.71□□□□□ -2.52
LDB2O43679 SNORD60.1-201ENST00000362451 73 ntBASIC-0.72□□□□□ -2.52
LDB2O43679 SNORD114-15-201ENST00000364687 72 ntBASIC-0.72□□□□□ -2.52
LDB2O43679 AL353691.2-201ENST00000443795 59 ntBASIC-0.73□□□□□ -2.53
LDB2O43679 SNORD57-201ENST00000448188 72 ntBASIC-0.73□□□□□ -2.53
LDB2O43679 SNORD63.1-201ENST00000516178 80 ntBASIC-0.73□□□□□ -2.53
LDB2O43679 SNORD1B-201ENST00000363091 84 ntBASIC-0.74□□□□□ -2.53
LDB2O43679 RNU6-30P-201ENST00000384561 107 ntBASIC-0.74□□□□□ -2.53
LDB2O43679 RNA5SP192-201ENST00000364404 120 ntBASIC-0.75□□□□□ -2.53
LDB2O43679 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.75□□□□□ -2.53
LDB2O43679 RNU6-122P-201ENST00000516818 107 ntBASIC-0.75□□□□□ -2.53
LDB2O43679 MIR147A-201ENST00000385079 72 ntBASIC-0.76□□□□□ -2.53
LDB2O43679 SNORD19-201ENST00000391191 68 ntBASIC-0.77□□□□□ -2.53
LDB2O43679 U2.18-201ENST00000622185 84 ntBASIC-0.77□□□□□ -2.53
LDB2O43679 RNU6-940P-201ENST00000363433 104 ntBASIC-0.78□□□□□ -2.53
LDB2O43679 RNU6-471P-201ENST00000383944 106 ntBASIC-0.78□□□□□ -2.53
LDB2O43679 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.78□□□□□ -2.53
LDB2O43679 MIR548AA1-201ENST00000384971 97 ntBASIC-0.79□□□□□ -2.54
LDB2O43679 RNU6-431P-201ENST00000383874 107 ntBASIC-0.8□□□□□ -2.54
LDB2O43679 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
LDB2O43679 MIR548Q-201ENST00000408404 100 ntBASIC-0.8□□□□□ -2.54
LDB2O43679 MIR5683-201ENST00000636514 76 ntBASIC-0.8□□□□□ -2.54
LDB2O43679 SNORD114-25-201ENST00000363742 72 ntBASIC-0.81□□□□□ -2.54
LDB2O43679 SNORD64-201ENST00000386683 67 ntBASIC-0.81□□□□□ -2.54
LDB2O43679 RNU6-172P-201ENST00000411000 93 ntBASIC-0.81□□□□□ -2.54
LDB2O43679 AC110620.1-201ENST00000416042 228 ntBASIC-0.82□□□□□ -2.54
LDB2O43679 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.82□□□□□ -2.54
LDB2O43679 MT-TQ-201ENST00000387372 72 ntBASIC-0.83□□□□□ -2.54
LDB2O43679 MIR4490-201ENST00000582647 84 ntBASIC-0.83□□□□□ -2.54
LDB2O43679 RNU6-590P-201ENST00000365039 107 ntBASIC-0.84□□□□□ -2.54
LDB2O43679 RNU6-669P-201ENST00000365575 107 ntBASIC-0.84□□□□□ -2.54
LDB2O43679 MIR196A1-201ENST00000388006 70 ntBASIC-0.84□□□□□ -2.54
LDB2O43679 RNU6-995P-201ENST00000391244 107 ntBASIC-0.84□□□□□ -2.54
LDB2O43679 RNU4-63P-201ENST00000411313 118 ntBASIC-0.84□□□□□ -2.54
LDB2O43679 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.84□□□□□ -2.54
LDB2O43679 RNU6-231P-201ENST00000517122 103 ntBASIC-0.84□□□□□ -2.54
LDB2O43679 AP002795.1-201ENST00000534879 84 ntBASIC-0.84□□□□□ -2.54
LDB2O43679 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.85□□□□□ -2.55
LDB2O43679 MIR548AX-201ENST00000580117 73 ntBASIC-0.85□□□□□ -2.55
LDB2O43679 MIR7110-201ENST00000612638 86 ntBASIC-0.85□□□□□ -2.55
LDB2O43679 RNU7-151P-201ENST00000516930 53 ntBASIC-0.87□□□□□ -2.55
LDB2O43679 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.87□□□□□ -2.55
LDB2O43679 snoU83B.1-201ENST00000517136 88 ntBASIC-0.87□□□□□ -2.55
LDB2O43679 MIR466-201ENST00000580653 84 ntBASIC-0.87□□□□□ -2.55
LDB2O43679 MIR382-201ENST00000637119 76 ntBASIC-0.87□□□□□ -2.55
LDB2O43679 MIR507-201ENST00000385234 94 ntBASIC-0.88□□□□□ -2.55
LDB2O43679 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.89□□□□□ -2.55
LDB2O43679 AL500527.2-201ENST00000454105 95 ntBASIC-0.89□□□□□ -2.55
LDB2O43679 RNU7-119P-201ENST00000459279 63 ntBASIC-0.89□□□□□ -2.55
LDB2O43679 MIR3170-201ENST00000582699 77 ntBASIC-0.89□□□□□ -2.55
LDB2O43679 MIR579-201ENST00000385221 98 ntBASIC-0.9□□□□□ -2.55
LDB2O43679 MIR3681-201ENST00000580089 72 ntBASIC-0.9□□□□□ -2.55
LDB2O43679 MIR3938-201ENST00000582157 103 ntBASIC-0.9□□□□□ -2.55
LDB2O43679 SNORD83B-201ENST00000386745 93 ntBASIC-0.91□□□□□ -2.56
LDB2O43679 SNORD116.2-201ENST00000391251 93 ntBASIC-0.91□□□□□ -2.56
LDB2O43679 RNU7-160P-201ENST00000516660 62 ntBASIC-0.91□□□□□ -2.56
LDB2O43679 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms