Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR6854-201ENST00000614935 69 ntBASIC-0.39□□□□□ -2.47
CCDC85CA6NKD9 MIR1246-201ENST00000636535 73 ntBASIC-0.39□□□□□ -2.47
CCDC85CA6NKD9 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
CCDC85CA6NKD9 MIR519A2-201ENST00000384990 87 ntBASIC-0.4□□□□□ -2.47
CCDC85CA6NKD9 MIR889-201ENST00000401280 79 ntBASIC-0.4□□□□□ -2.47
CCDC85CA6NKD9 AC114755.3-201ENST00000481111 251 ntBASIC-0.4□□□□□ -2.47
CCDC85CA6NKD9 SNORD115-31-201ENST00000365318 82 ntBASIC-0.42□□□□□ -2.48
CCDC85CA6NKD9 SNORA62.4-201ENST00000365504 151 ntBASIC-0.42□□□□□ -2.48
CCDC85CA6NKD9 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.42□□□□□ -2.48
CCDC85CA6NKD9 RNU6-732P-201ENST00000516033 103 ntBASIC-0.42□□□□□ -2.48
CCDC85CA6NKD9 RNU7-154P-201ENST00000516194 62 ntBASIC-0.42□□□□□ -2.48
CCDC85CA6NKD9 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.42□□□□□ -2.48
CCDC85CA6NKD9 MIR204-201ENST00000385200 110 ntBASIC-0.43□□□□□ -2.48
CCDC85CA6NKD9 MIR4436A-201ENST00000585278 85 ntBASIC-0.43□□□□□ -2.48
CCDC85CA6NKD9 MIR6851-201ENST00000617060 67 ntBASIC-0.43□□□□□ -2.48
CCDC85CA6NKD9 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.44□□□□□ -2.48
CCDC85CA6NKD9 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.44□□□□□ -2.48
CCDC85CA6NKD9 MIR196A1-201ENST00000388006 70 ntBASIC-0.44□□□□□ -2.48
CCDC85CA6NKD9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.44□□□□□ -2.48
CCDC85CA6NKD9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.44□□□□□ -2.48
CCDC85CA6NKD9 MIR517B-201ENST00000385102 67 ntBASIC-0.45□□□□□ -2.48
CCDC85CA6NKD9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.45□□□□□ -2.48
CCDC85CA6NKD9 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.45□□□□□ -2.48
CCDC85CA6NKD9 MIR548V-201ENST00000584165 80 ntBASIC-0.46□□□□□ -2.48
CCDC85CA6NKD9 MIR4662A-201ENST00000637499 67 ntBASIC-0.46□□□□□ -2.48
CCDC85CA6NKD9 RNU6-226P-201ENST00000363778 107 ntBASIC-0.47□□□□□ -2.48
CCDC85CA6NKD9 SNORA3B-201ENST00000391305 131 ntBASIC-0.48□□□□□ -2.49
CCDC85CA6NKD9 RNU7-174P-201ENST00000516248 59 ntBASIC-0.49□□□□□ -2.49
CCDC85CA6NKD9 RNU6-523P-201ENST00000516304 54 ntBASIC-0.49□□□□□ -2.49
CCDC85CA6NKD9 RNA5SP215-201ENST00000363440 122 ntBASIC-0.5□□□□□ -2.49
CCDC85CA6NKD9 RNU6-119P-201ENST00000364882 107 ntBASIC-0.5□□□□□ -2.49
CCDC85CA6NKD9 MIR124-2-201ENST00000385081 109 ntBASIC-0.5□□□□□ -2.49
CCDC85CA6NKD9 MIR518B-201ENST00000385127 83 ntBASIC-0.5□□□□□ -2.49
CCDC85CA6NKD9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.5□□□□□ -2.49
CCDC85CA6NKD9 RNU6-634P-201ENST00000459134 106 ntBASIC-0.5□□□□□ -2.49
CCDC85CA6NKD9 MIR3165-201ENST00000579874 75 ntBASIC-0.5□□□□□ -2.49
CCDC85CA6NKD9 RNU6-776P-201ENST00000364403 104 ntBASIC-0.51□□□□□ -2.49
CCDC85CA6NKD9 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.51□□□□□ -2.49
CCDC85CA6NKD9 SNORD116-24-201ENST00000384549 92 ntBASIC-0.51□□□□□ -2.49
CCDC85CA6NKD9 RNU6-871P-201ENST00000516122 100 ntBASIC-0.51□□□□□ -2.49
CCDC85CA6NKD9 SNORD22.1-201ENST00000516331 125 ntBASIC-0.51□□□□□ -2.49
CCDC85CA6NKD9 MIR6888-201ENST00000621977 67 ntBASIC-0.51□□□□□ -2.49
CCDC85CA6NKD9 RNU6-540P-201ENST00000384622 101 ntBASIC-0.52□□□□□ -2.49
CCDC85CA6NKD9 MIR4464-201ENST00000580818 92 ntBASIC-0.52□□□□□ -2.49
CCDC85CA6NKD9 AC091912.2-201ENST00000624798 167 ntBASIC-0.52□□□□□ -2.49
CCDC85CA6NKD9 RNU6-698P-201ENST00000363523 107 ntBASIC-0.53□□□□□ -2.49
CCDC85CA6NKD9 RNU6-34P-201ENST00000364874 107 ntBASIC-0.53□□□□□ -2.49
CCDC85CA6NKD9 MIR630-201ENST00000384957 97 ntBASIC-0.53□□□□□ -2.49
CCDC85CA6NKD9 AL445584.3-201ENST00000617173 78 ntBASIC-0.53□□□□□ -2.49
CCDC85CA6NKD9 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.54□□□□□ -2.5
CCDC85CA6NKD9 RNU6-663P-201ENST00000391105 106 ntBASIC-0.54□□□□□ -2.5
CCDC85CA6NKD9 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.55□□□□□ -2.5
CCDC85CA6NKD9 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.55□□□□□ -2.5
CCDC85CA6NKD9 SNORA13-201ENST00000458790 133 ntBASIC-0.55□□□□□ -2.5
CCDC85CA6NKD9 SNORD18.2-201ENST00000459604 70 ntBASIC-0.55□□□□□ -2.5
CCDC85CA6NKD9 MIR3179-1-201ENST00000578940 84 ntBASIC-0.55□□□□□ -2.5
CCDC85CA6NKD9 MIR3179-2-201ENST00000579107 84 ntBASIC-0.55□□□□□ -2.5
CCDC85CA6NKD9 MIR3179-3-201ENST00000579566 84 ntBASIC-0.55□□□□□ -2.5
CCDC85CA6NKD9 MIR3179-4-201ENST00000617599 84 ntBASIC-0.55□□□□□ -2.5
CCDC85CA6NKD9 SNORD74.6-201ENST00000364796 70 ntBASIC-0.56□□□□□ -2.5
CCDC85CA6NKD9 SNORD30.1-201ENST00000391309 70 ntBASIC-0.56□□□□□ -2.5
CCDC85CA6NKD9 AP000533.3-201ENST00000447704 118 ntBASIC-0.56□□□□□ -2.5
CCDC85CA6NKD9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.56□□□□□ -2.5
CCDC85CA6NKD9 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.56□□□□□ -2.5
CCDC85CA6NKD9 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.57□□□□□ -2.5
CCDC85CA6NKD9 SNORD113-2-201ENST00000391082 72 ntBASIC-0.57□□□□□ -2.5
CCDC85CA6NKD9 MIR548AG1-201ENST00000579932 66 ntBASIC-0.57□□□□□ -2.5
CCDC85CA6NKD9 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.58□□□□□ -2.5
CCDC85CA6NKD9 RNU6-924P-201ENST00000362926 108 ntBASIC-0.58□□□□□ -2.5
CCDC85CA6NKD9 SNORD83B-201ENST00000386745 93 ntBASIC-0.58□□□□□ -2.5
CCDC85CA6NKD9 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.58□□□□□ -2.5
CCDC85CA6NKD9 U4.4-201ENST00000620626 117 ntBASIC-0.58□□□□□ -2.5
CCDC85CA6NKD9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.59□□□□□ -2.5
CCDC85CA6NKD9 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.59□□□□□ -2.5
CCDC85CA6NKD9 MIR527-201ENST00000385244 85 ntBASIC-0.59□□□□□ -2.5
CCDC85CA6NKD9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
CCDC85CA6NKD9 AC021146.6-201ENST00000514659 117 ntBASIC-0.59□□□□□ -2.5
CCDC85CA6NKD9 RNU6-630P-201ENST00000391258 106 ntBASIC-0.6□□□□□ -2.51
CCDC85CA6NKD9 AL500527.2-201ENST00000454105 95 ntBASIC-0.6□□□□□ -2.51
CCDC85CA6NKD9 RNU6-649P-201ENST00000384463 107 ntBASIC-0.61□□□□□ -2.51
CCDC85CA6NKD9 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.62□□□□□ -2.51
CCDC85CA6NKD9 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.62□□□□□ -2.51
CCDC85CA6NKD9 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.62□□□□□ -2.51
CCDC85CA6NKD9 RNU6-638P-201ENST00000516582 104 ntBASIC-0.62□□□□□ -2.51
CCDC85CA6NKD9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.63□□□□□ -2.51
CCDC85CA6NKD9 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.63□□□□□ -2.51
CCDC85CA6NKD9 SNORD54-201ENST00000459159 67 ntBASIC-0.63□□□□□ -2.51
CCDC85CA6NKD9 RNU6-542P-201ENST00000516405 103 ntBASIC-0.63□□□□□ -2.51
CCDC85CA6NKD9 MIR4306-201ENST00000583390 91 ntBASIC-0.63□□□□□ -2.51
CCDC85CA6NKD9 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.64□□□□□ -2.51
CCDC85CA6NKD9 RNU6-118P-201ENST00000516552 102 ntBASIC-0.64□□□□□ -2.51
CCDC85CA6NKD9 MIR4499-201ENST00000584834 69 ntBASIC-0.64□□□□□ -2.51
CCDC85CA6NKD9 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.65□□□□□ -2.51
CCDC85CA6NKD9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.65□□□□□ -2.51
CCDC85CA6NKD9 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.65□□□□□ -2.51
CCDC85CA6NKD9 MIR429-201ENST00000362106 83 ntBASIC-0.67□□□□□ -2.52
CCDC85CA6NKD9 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.67□□□□□ -2.52
CCDC85CA6NKD9 RNU6-458P-201ENST00000384179 107 ntBASIC-0.67□□□□□ -2.52
CCDC85CA6NKD9 U6.58-201ENST00000613107 107 ntBASIC-0.67□□□□□ -2.52
CCDC85CA6NKD9 RNU6-431P-201ENST00000383874 107 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms