Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 SNORD115-23-201ENST00000364461 82 ntBASIC0.29□□□□□ -2.36
PTPN22Q9Y2R2 MIR519A2-201ENST00000384990 87 ntBASIC0.29□□□□□ -2.36
PTPN22Q9Y2R2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
PTPN22Q9Y2R2 Y_RNA.74-201ENST00000362911 99 ntBASIC0.28□□□□□ -2.36
PTPN22Q9Y2R2 RNA5SP192-201ENST00000364404 120 ntBASIC0.28□□□□□ -2.36
PTPN22Q9Y2R2 MIR610-201ENST00000385139 96 ntBASIC0.27□□□□□ -2.37
PTPN22Q9Y2R2 MIR6514-201ENST00000622549 70 ntBASIC0.27□□□□□ -2.37
PTPN22Q9Y2R2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.26□□□□□ -2.37
PTPN22Q9Y2R2 SNORD60.1-201ENST00000362451 73 ntBASIC0.26□□□□□ -2.37
PTPN22Q9Y2R2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.26□□□□□ -2.37
PTPN22Q9Y2R2 AP000676.1-201ENST00000533307 52 ntBASIC0.26□□□□□ -2.37
PTPN22Q9Y2R2 Y_RNA.325-201ENST00000365171 122 ntBASIC0.25□□□□□ -2.37
PTPN22Q9Y2R2 snoU13.19-201ENST00000459148 104 ntBASIC0.25□□□□□ -2.37
PTPN22Q9Y2R2 RNU7-55P-201ENST00000459426 62 ntBASIC0.25□□□□□ -2.37
PTPN22Q9Y2R2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.25□□□□□ -2.37
PTPN22Q9Y2R2 RNU6-900P-201ENST00000384498 102 ntBASIC0.24□□□□□ -2.37
PTPN22Q9Y2R2 RNA5SP163-201ENST00000410304 99 ntBASIC0.24□□□□□ -2.37
PTPN22Q9Y2R2 RNA5SP25-201ENST00000410815 110 ntBASIC0.23□□□□□ -2.37
PTPN22Q9Y2R2 RNU7-165P-201ENST00000458864 60 ntBASIC0.23□□□□□ -2.37
PTPN22Q9Y2R2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.23□□□□□ -2.37
PTPN22Q9Y2R2 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
PTPN22Q9Y2R2 RNU6-1246P-201ENST00000391064 107 ntBASIC0.22□□□□□ -2.37
PTPN22Q9Y2R2 MIR466-201ENST00000580653 84 ntBASIC0.22□□□□□ -2.37
PTPN22Q9Y2R2 AC104408.1-201ENST00000605241 170 ntBASIC0.22□□□□□ -2.37
PTPN22Q9Y2R2 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
PTPN22Q9Y2R2 RNU6-973P-201ENST00000364690 107 ntBASIC0.21□□□□□ -2.38
PTPN22Q9Y2R2 RNU6-499P-201ENST00000365615 107 ntBASIC0.21□□□□□ -2.38
PTPN22Q9Y2R2 Z95118.1-201ENST00000421372 247 ntBASIC0.21□□□□□ -2.38
PTPN22Q9Y2R2 MIR6507-201ENST00000613630 70 ntBASIC0.21□□□□□ -2.38
PTPN22Q9Y2R2 SNORD114-9-201ENST00000364370 72 ntBASIC0.2□□□□□ -2.38
PTPN22Q9Y2R2 Y_RNA.282-201ENST00000364793 102 ntBASIC0.2□□□□□ -2.38
PTPN22Q9Y2R2 SNORD116-16-201ENST00000384533 92 ntBASIC0.2□□□□□ -2.38
PTPN22Q9Y2R2 MIR593-201ENST00000384856 100 ntBASIC0.2□□□□□ -2.38
PTPN22Q9Y2R2 MIR145-201ENST00000384967 88 ntBASIC0.2□□□□□ -2.38
PTPN22Q9Y2R2 MIR4432-201ENST00000581823 84 ntBASIC0.2□□□□□ -2.38
PTPN22Q9Y2R2 AL353803.5-201ENST00000599815 141 ntBASIC0.2□□□□□ -2.38
PTPN22Q9Y2R2 RNU7-159P-201ENST00000459284 62 ntBASIC0.19□□□□□ -2.38
PTPN22Q9Y2R2 MIR3938-201ENST00000582157 103 ntBASIC0.19□□□□□ -2.38
PTPN22Q9Y2R2 SNORA41B-201ENST00000384785 128 ntBASIC0.18□□□□□ -2.38
PTPN22Q9Y2R2 MIR548AG1-201ENST00000579932 66 ntBASIC0.18□□□□□ -2.38
PTPN22Q9Y2R2 snoR1.1-201ENST00000628177 80 ntBASIC0.18□□□□□ -2.38
PTPN22Q9Y2R2 SNORA62.4-201ENST00000365504 151 ntBASIC0.17□□□□□ -2.38
PTPN22Q9Y2R2 AC096531.1-201ENST00000419107 107 ntBASIC0.17□□□□□ -2.38
PTPN22Q9Y2R2 MIR4768-201ENST00000585270 74 ntBASIC0.17□□□□□ -2.38
PTPN22Q9Y2R2 AL391099.1-201ENST00000624635 187 ntBASIC0.17□□□□□ -2.38
PTPN22Q9Y2R2 MIR371B-201ENST00000638082 66 ntBASIC0.17□□□□□ -2.38
PTPN22Q9Y2R2 MIR429-201ENST00000362106 83 ntBASIC0.16□□□□□ -2.38
PTPN22Q9Y2R2 SNORD114-5-201ENST00000362928 70 ntBASIC0.16□□□□□ -2.38
PTPN22Q9Y2R2 Y_RNA.185-201ENST00000363894 100 ntBASIC0.16□□□□□ -2.38
PTPN22Q9Y2R2 RNU6-455P-201ENST00000384681 107 ntBASIC0.16□□□□□ -2.38
PTPN22Q9Y2R2 MIR527-201ENST00000385244 85 ntBASIC0.16□□□□□ -2.38
PTPN22Q9Y2R2 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
PTPN22Q9Y2R2 RNU6-46P-201ENST00000383860 107 ntBASIC0.15□□□□□ -2.39
PTPN22Q9Y2R2 RNU6-1133P-201ENST00000410963 100 ntBASIC0.14□□□□□ -2.39
PTPN22Q9Y2R2 AC079150.2-201ENST00000443733 78 ntBASIC0.14□□□□□ -2.39
PTPN22Q9Y2R2 AC244250.2-201ENST00000418731 148 ntBASIC0.13□□□□□ -2.39
PTPN22Q9Y2R2 MIR655-201ENST00000362159 97 ntBASIC0.12□□□□□ -2.39
PTPN22Q9Y2R2 RNU6-1079P-201ENST00000362861 110 ntBASIC0.12□□□□□ -2.39
PTPN22Q9Y2R2 RNU6-246P-201ENST00000384702 107 ntBASIC0.12□□□□□ -2.39
PTPN22Q9Y2R2 AC104692.1-201ENST00000472406 90 ntBASIC0.12□□□□□ -2.39
PTPN22Q9Y2R2 RNU6-758P-201ENST00000516292 89 ntBASIC0.12□□□□□ -2.39
PTPN22Q9Y2R2 MIR4290-201ENST00000583807 95 ntBASIC0.12□□□□□ -2.39
PTPN22Q9Y2R2 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.12□□□□□ -2.39
PTPN22Q9Y2R2 RNU6-1184P-201ENST00000384588 108 ntBASIC0.11□□□□□ -2.39
PTPN22Q9Y2R2 MIR633-201ENST00000384821 98 ntBASIC0.11□□□□□ -2.39
PTPN22Q9Y2R2 MIR4464-201ENST00000580818 92 ntBASIC0.11□□□□□ -2.39
PTPN22Q9Y2R2 uc_338.36-201ENST00000622331 158 ntBASIC0.11□□□□□ -2.39
PTPN22Q9Y2R2 RNA5SP331-201ENST00000364986 107 ntBASIC0.1□□□□□ -2.39
PTPN22Q9Y2R2 RNU6-929P-201ENST00000384429 107 ntBASIC0.1□□□□□ -2.39
PTPN22Q9Y2R2 RNU6-520P-201ENST00000384717 104 ntBASIC0.1□□□□□ -2.39
PTPN22Q9Y2R2 Y_RNA.698-201ENST00000516798 118 ntBASIC0.1□□□□□ -2.39
PTPN22Q9Y2R2 IGLVI-20-201ENST00000519296 130 ntBASIC0.1□□□□□ -2.39
PTPN22Q9Y2R2 AC108676.2-201ENST00000605225 163 ntBASIC0.1□□□□□ -2.39
PTPN22Q9Y2R2 RNU6-829P-201ENST00000363700 112 ntBASIC0.09□□□□□ -2.4
PTPN22Q9Y2R2 RNU6-458P-201ENST00000384179 107 ntBASIC0.09□□□□□ -2.4
PTPN22Q9Y2R2 U6.58-201ENST00000613107 107 ntBASIC0.09□□□□□ -2.4
PTPN22Q9Y2R2 Y_RNA.109-201ENST00000363215 102 ntBASIC0.08□□□□□ -2.4
PTPN22Q9Y2R2 SNORD114-15-201ENST00000364687 72 ntBASIC0.08□□□□□ -2.4
PTPN22Q9Y2R2 RNU6-30P-201ENST00000384561 107 ntBASIC0.08□□□□□ -2.4
PTPN22Q9Y2R2 RNU7-119P-201ENST00000459279 63 ntBASIC0.08□□□□□ -2.4
PTPN22Q9Y2R2 MIR4493-201ENST00000584016 73 ntBASIC0.08□□□□□ -2.4
PTPN22Q9Y2R2 AL445584.3-201ENST00000617173 78 ntBASIC0.07□□□□□ -2.4
PTPN22Q9Y2R2 MIR6888-201ENST00000621977 67 ntBASIC0.07□□□□□ -2.4
PTPN22Q9Y2R2 MIR1295B-201ENST00000636144 60 ntBASIC0.07□□□□□ -2.4
PTPN22Q9Y2R2 RNU6-446P-201ENST00000362827 106 ntBASIC0.06□□□□□ -2.4
PTPN22Q9Y2R2 SNORD56B-201ENST00000384713 71 ntBASIC0.06□□□□□ -2.4
PTPN22Q9Y2R2 RNU6-231P-201ENST00000517122 103 ntBASIC0.06□□□□□ -2.4
PTPN22Q9Y2R2 MIR5704-201ENST00000584029 77 ntBASIC0.06□□□□□ -2.4
PTPN22Q9Y2R2 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
PTPN22Q9Y2R2 Y_RNA.236-201ENST00000364427 111 ntBASIC0.05□□□□□ -2.4
PTPN22Q9Y2R2 SNORD49B-201ENST00000365172 72 ntBASIC0.05□□□□□ -2.4
PTPN22Q9Y2R2 MIR8068-201ENST00000618032 68 ntBASIC0.05□□□□□ -2.4
PTPN22Q9Y2R2 AP001180.6-201ENST00000584918 159 ntBASIC0.04□□□□□ -2.4
PTPN22Q9Y2R2 MIR6854-201ENST00000614935 69 ntBASIC0.04□□□□□ -2.4
PTPN22Q9Y2R2 SNORD1B-201ENST00000363091 84 ntBASIC0.03□□□□□ -2.4
PTPN22Q9Y2R2 RNU6-901P-201ENST00000384593 106 ntBASIC0.03□□□□□ -2.4
PTPN22Q9Y2R2 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
PTPN22Q9Y2R2 RNA5SP368-201ENST00000364298 116 ntBASIC0.02□□□□□ -2.41
PTPN22Q9Y2R2 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
PTPN22Q9Y2R2 SNORA18.1-201ENST00000363418 128 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 282.7 ms