Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SNORD71-201ENST00000411292 86 ntBASIC1.3□□□□□ -2.2
LHX6Q9UPM6 AL590095.2-201ENST00000604136 117 ntBASIC1.3□□□□□ -2.2
LHX6Q9UPM6 AL445584.3-201ENST00000617173 78 ntBASIC1.3□□□□□ -2.2
LHX6Q9UPM6 MIR6755-201ENST00000619993 66 ntBASIC1.3□□□□□ -2.2
LHX6Q9UPM6 AC104408.1-201ENST00000605241 170 ntBASIC1.29□□□□□ -2.2
LHX6Q9UPM6 MIR760-201ENST00000390220 80 ntBASIC1.28□□□□□ -2.2
LHX6Q9UPM6 RNU6-894P-201ENST00000517094 105 ntBASIC1.28□□□□□ -2.2
LHX6Q9UPM6 MIR3925-201ENST00000584674 77 ntBASIC1.28□□□□□ -2.2
LHX6Q9UPM6 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
LHX6Q9UPM6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
LHX6Q9UPM6 MIR518A1-201ENST00000385068 85 ntBASIC1.27□□□□□ -2.21
LHX6Q9UPM6 RNU6-1111P-201ENST00000391118 107 ntBASIC1.26□□□□□ -2.21
LHX6Q9UPM6 AC138207.3-201ENST00000585289 166 ntBASIC1.26□□□□□ -2.21
LHX6Q9UPM6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
LHX6Q9UPM6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
LHX6Q9UPM6 RNA5SP257-201ENST00000363023 116 ntBASIC1.25□□□□□ -2.21
LHX6Q9UPM6 RNA5SP128-201ENST00000365305 116 ntBASIC1.25□□□□□ -2.21
LHX6Q9UPM6 Y_RNA.613-201ENST00000410726 97 ntBASIC1.25□□□□□ -2.21
LHX6Q9UPM6 RNU6-1326P-201ENST00000391262 107 ntBASIC1.24□□□□□ -2.21
LHX6Q9UPM6 RNU4-54P-201ENST00000516428 129 ntBASIC1.24□□□□□ -2.21
LHX6Q9UPM6 MIR1468-201ENST00000410600 86 ntBASIC1.23□□□□□ -2.21
LHX6Q9UPM6 MIR4661-201ENST00000582720 75 ntBASIC1.23□□□□□ -2.21
LHX6Q9UPM6 AL391099.1-201ENST00000624635 187 ntBASIC1.23□□□□□ -2.21
LHX6Q9UPM6 MIR4317-201ENST00000637586 65 ntBASIC1.23□□□□□ -2.21
LHX6Q9UPM6 RNA5SP98-201ENST00000363158 137 ntBASIC1.22□□□□□ -2.21
LHX6Q9UPM6 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
LHX6Q9UPM6 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
LHX6Q9UPM6 MIR924-201ENST00000638017 53 ntBASIC1.22□□□□□ -2.21
LHX6Q9UPM6 RNU6-1133P-201ENST00000410963 100 ntBASIC1.21□□□□□ -2.22
LHX6Q9UPM6 RNA5SP330-201ENST00000517096 96 ntBASIC1.21□□□□□ -2.22
LHX6Q9UPM6 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
LHX6Q9UPM6 RNA5SP121-201ENST00000516537 101 ntBASIC1.2□□□□□ -2.22
LHX6Q9UPM6 Y_RNA.345-201ENST00000365384 92 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 SCARNA11.2-201ENST00000517183 154 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 RNU6-1238P-201ENST00000517215 102 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 MIR499B-201ENST00000636498 73 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 RNU6-973P-201ENST00000364690 107 ntBASIC1.18□□□□□ -2.22
LHX6Q9UPM6 RNU7-55P-201ENST00000459426 62 ntBASIC1.18□□□□□ -2.22
LHX6Q9UPM6 MIR6507-201ENST00000613630 70 ntBASIC1.18□□□□□ -2.22
LHX6Q9UPM6 MIR608-201ENST00000384820 100 ntBASIC1.17□□□□□ -2.22
LHX6Q9UPM6 RNU6-863P-201ENST00000515989 104 ntBASIC1.16□□□□□ -2.22
LHX6Q9UPM6 RNU6-732P-201ENST00000516033 103 ntBASIC1.16□□□□□ -2.22
LHX6Q9UPM6 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
LHX6Q9UPM6 uc_338.36-201ENST00000622331 158 ntBASIC1.16□□□□□ -2.22
LHX6Q9UPM6 RNU6-1047P-201ENST00000364418 107 ntBASIC1.15□□□□□ -2.23
LHX6Q9UPM6 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
LHX6Q9UPM6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
LHX6Q9UPM6 Y_RNA.206-201ENST00000364136 102 ntBASIC1.14□□□□□ -2.23
LHX6Q9UPM6 MIR6086-201ENST00000638065 55 ntBASIC1.14□□□□□ -2.23
LHX6Q9UPM6 SNORA27.2-201ENST00000363365 126 ntBASIC1.13□□□□□ -2.23
LHX6Q9UPM6 AC096531.1-201ENST00000419107 107 ntBASIC1.13□□□□□ -2.23
LHX6Q9UPM6 RNU7-129P-201ENST00000516128 62 ntBASIC1.13□□□□□ -2.23
LHX6Q9UPM6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LHX6Q9UPM6 RNU6-258P-201ENST00000390884 101 ntBASIC1.12□□□□□ -2.23
LHX6Q9UPM6 Y_RNA.699-201ENST00000516803 93 ntBASIC1.12□□□□□ -2.23
LHX6Q9UPM6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.12□□□□□ -2.23
LHX6Q9UPM6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
LHX6Q9UPM6 SNORD114-23-201ENST00000363536 72 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 RNU6-900P-201ENST00000384498 102 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 RNU6-110P-201ENST00000384508 104 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 MIR8087-201ENST00000612745 78 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 AC010487.4-201ENST00000637027 61 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 MIR4426-201ENST00000640330 63 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 AC108740.1-201ENST00000498629 225 ntBASIC1.1□□□□□ -2.23
LHX6Q9UPM6 MIR548Q-201ENST00000408404 100 ntBASIC1.09□□□□□ -2.23
LHX6Q9UPM6 MIR373-201ENST00000362273 69 ntBASIC1.08□□□□□ -2.24
LHX6Q9UPM6 AL627230.5-201ENST00000619807 58 ntBASIC1.08□□□□□ -2.24
LHX6Q9UPM6 uc_338.17-201ENST00000619633 179 ntBASIC1.07□□□□□ -2.24
LHX6Q9UPM6 RNU6-133P-201ENST00000383989 107 ntBASIC1.06□□□□□ -2.24
LHX6Q9UPM6 MIR520D-201ENST00000385002 87 ntBASIC1.06□□□□□ -2.24
LHX6Q9UPM6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
LHX6Q9UPM6 RNU6-361P-201ENST00000364454 107 ntBASIC1.04□□□□□ -2.24
LHX6Q9UPM6 MIR6513-201ENST00000621188 64 ntBASIC1.04□□□□□ -2.24
LHX6Q9UPM6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
LHX6Q9UPM6 SNORD19-201ENST00000391191 68 ntBASIC1.03□□□□□ -2.24
LHX6Q9UPM6 SNORA42.1-201ENST00000363515 137 ntBASIC1.02□□□□□ -2.25
LHX6Q9UPM6 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
LHX6Q9UPM6 MIR4714-201ENST00000580728 77 ntBASIC1.02□□□□□ -2.25
LHX6Q9UPM6 SNORD44.1-201ENST00000363202 61 ntBASIC1.01□□□□□ -2.25
LHX6Q9UPM6 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
LHX6Q9UPM6 MIR5704-201ENST00000584029 77 ntBASIC1.01□□□□□ -2.25
LHX6Q9UPM6 MIR330-201ENST00000362196 94 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 RNU6-1233P-201ENST00000362922 102 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 MIR936-201ENST00000401264 98 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 MIR1197-201ENST00000408818 88 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 RNA5SP169-201ENST00000517268 117 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 RNY1P9-201ENST00000532431 109 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 MIR6854-201ENST00000614935 69 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LHX6Q9UPM6 RNU6-455P-201ENST00000384681 107 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 MIR124-2-201ENST00000385081 109 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 RNU6-300P-201ENST00000459080 104 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 MIR8068-201ENST00000618032 68 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 SNORD111B-201ENST00000408587 80 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 238.2 ms