Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MIR548F4-201ENST00000408515 105 ntBASIC-3.12□□□□□ -2.91
VPS29Q9UBQ0 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.12□□□□□ -2.91
VPS29Q9UBQ0 MIR548X2-201ENST00000579776 100 ntBASIC-3.12□□□□□ -2.91
VPS29Q9UBQ0 MIR548S-201ENST00000581352 82 ntBASIC-3.12□□□□□ -2.91
VPS29Q9UBQ0 MIR3675-201ENST00000583661 73 ntBASIC-3.12□□□□□ -2.91
VPS29Q9UBQ0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.12□□□□□ -2.91
VPS29Q9UBQ0 AL157777.2-201ENST00000258070 137 ntBASIC-3.13□□□□□ -2.91
VPS29Q9UBQ0 RNU6-330P-201ENST00000363015 107 ntBASIC-3.13□□□□□ -2.91
VPS29Q9UBQ0 SNORD1B-201ENST00000363091 84 ntBASIC-3.13□□□□□ -2.91
VPS29Q9UBQ0 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.13□□□□□ -2.91
VPS29Q9UBQ0 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.13□□□□□ -2.91
VPS29Q9UBQ0 RNU6-772P-201ENST00000516042 105 ntBASIC-3.13□□□□□ -2.91
VPS29Q9UBQ0 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.14□□□□□ -2.91
VPS29Q9UBQ0 AC097484.2-201ENST00000509147 251 ntBASIC-3.14□□□□□ -2.91
VPS29Q9UBQ0 RNU7-151P-201ENST00000516930 53 ntBASIC-3.14□□□□□ -2.91
VPS29Q9UBQ0 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.14□□□□□ -2.91
VPS29Q9UBQ0 MIR3128-201ENST00000581957 66 ntBASIC-3.14□□□□□ -2.91
VPS29Q9UBQ0 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.15□□□□□ -2.91
VPS29Q9UBQ0 SNORD18C-201ENST00000362704 69 ntBASIC-3.15□□□□□ -2.91
VPS29Q9UBQ0 RNY4P7-201ENST00000364600 96 ntBASIC-3.15□□□□□ -2.91
VPS29Q9UBQ0 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.15□□□□□ -2.91
VPS29Q9UBQ0 RNU6-574P-201ENST00000384265 107 ntBASIC-3.17□□□□□ -2.92
VPS29Q9UBQ0 MIR579-201ENST00000385221 98 ntBASIC-3.17□□□□□ -2.92
VPS29Q9UBQ0 SNORD45.1-201ENST00000363181 77 ntBASIC-3.18□□□□□ -2.92
VPS29Q9UBQ0 SNORA8.1-201ENST00000384250 140 ntBASIC-3.18□□□□□ -2.92
VPS29Q9UBQ0 SNORA41B-201ENST00000384785 128 ntBASIC-3.18□□□□□ -2.92
VPS29Q9UBQ0 MIR519C-201ENST00000385053 87 ntBASIC-3.18□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.18□□□□□ -2.92
VPS29Q9UBQ0 SNORD116-18-201ENST00000383961 92 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 RNU7-61P-201ENST00000515897 61 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 RNU6-904P-201ENST00000516206 101 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.19□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.2□□□□□ -2.92
VPS29Q9UBQ0 SNORA20.1-201ENST00000364790 130 ntBASIC-3.2□□□□□ -2.92
VPS29Q9UBQ0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.2□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.2□□□□□ -2.92
VPS29Q9UBQ0 RNY4P9-201ENST00000363194 97 ntBASIC-3.21□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.21□□□□□ -2.92
VPS29Q9UBQ0 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.21□□□□□ -2.92
VPS29Q9UBQ0 RNU6-523P-201ENST00000516304 54 ntBASIC-3.21□□□□□ -2.92
VPS29Q9UBQ0 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.22□□□□□ -2.92
VPS29Q9UBQ0 RNU6-162P-201ENST00000516228 103 ntBASIC-3.22□□□□□ -2.92
VPS29Q9UBQ0 MIR7978-201ENST00000636158 59 ntBASIC-3.22□□□□□ -2.92
VPS29Q9UBQ0 RNA5SP215-201ENST00000363440 122 ntBASIC-3.23□□□□□ -2.93
VPS29Q9UBQ0 MIR569-201ENST00000385228 96 ntBASIC-3.23□□□□□ -2.93
VPS29Q9UBQ0 RNY4P18-201ENST00000391107 89 ntBASIC-3.23□□□□□ -2.93
VPS29Q9UBQ0 MTND4LP1-201ENST00000446263 157 ntBASIC-3.23□□□□□ -2.93
VPS29Q9UBQ0 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.24□□□□□ -2.93
VPS29Q9UBQ0 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.24□□□□□ -2.93
VPS29Q9UBQ0 MIR581-201ENST00000384895 96 ntBASIC-3.25□□□□□ -2.93
VPS29Q9UBQ0 RNU6-303P-201ENST00000517091 106 ntBASIC-3.25□□□□□ -2.93
VPS29Q9UBQ0 AL117187.1-201ENST00000555482 181 ntBASIC-3.25□□□□□ -2.93
VPS29Q9UBQ0 RNY1P1-201ENST00000364372 112 ntBASIC-3.26□□□□□ -2.93
VPS29Q9UBQ0 RNU6-974P-201ENST00000384099 108 ntBASIC-3.26□□□□□ -2.93
VPS29Q9UBQ0 RNU6-172P-201ENST00000411000 93 ntBASIC-3.26□□□□□ -2.93
VPS29Q9UBQ0 RNU6-182P-201ENST00000516970 105 ntBASIC-3.26□□□□□ -2.93
VPS29Q9UBQ0 SNORD115-37-201ENST00000363768 82 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 RNU6-668P-201ENST00000364180 107 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 RNA5SP173-201ENST00000364857 136 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 RNY3P14-201ENST00000384309 102 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 MIR125B1-201ENST00000385236 88 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 MTCYBP6-201ENST00000441810 138 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 U7.3-201ENST00000616123 62 ntBASIC-3.27□□□□□ -2.93
VPS29Q9UBQ0 RNU6-624P-201ENST00000363411 107 ntBASIC-3.28□□□□□ -2.93
VPS29Q9UBQ0 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.28□□□□□ -2.93
VPS29Q9UBQ0 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.28□□□□□ -2.93
VPS29Q9UBQ0 SNORD60-201ENST00000383903 83 ntBASIC-3.29□□□□□ -2.94
VPS29Q9UBQ0 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.29□□□□□ -2.94
VPS29Q9UBQ0 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.29□□□□□ -2.94
VPS29Q9UBQ0 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.3□□□□□ -2.94
VPS29Q9UBQ0 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.3□□□□□ -2.94
VPS29Q9UBQ0 RNU7-107P-201ENST00000459121 61 ntBASIC-3.3□□□□□ -2.94
VPS29Q9UBQ0 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.3□□□□□ -2.94
VPS29Q9UBQ0 SNORD33.1-201ENST00000516213 88 ntBASIC-3.3□□□□□ -2.94
VPS29Q9UBQ0 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.32□□□□□ -2.94
VPS29Q9UBQ0 RNU6-520P-201ENST00000384717 104 ntBASIC-3.32□□□□□ -2.94
VPS29Q9UBQ0 AC074348.1-201ENST00000426503 132 ntBASIC-3.32□□□□□ -2.94
VPS29Q9UBQ0 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.32□□□□□ -2.94
VPS29Q9UBQ0 AC062037.2-201ENST00000610137 73 ntBASIC-3.32□□□□□ -2.94
VPS29Q9UBQ0 MIR202-201ENST00000362219 110 ntBASIC-3.33□□□□□ -2.94
VPS29Q9UBQ0 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.33□□□□□ -2.94
VPS29Q9UBQ0 MTND4LP9-201ENST00000427694 174 ntBASIC-3.33□□□□□ -2.94
VPS29Q9UBQ0 RNU7-120P-201ENST00000459334 63 ntBASIC-3.33□□□□□ -2.94
VPS29Q9UBQ0 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.34□□□□□ -2.94
VPS29Q9UBQ0 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.34□□□□□ -2.94
VPS29Q9UBQ0 RNU6-649P-201ENST00000384463 107 ntBASIC-3.34□□□□□ -2.94
VPS29Q9UBQ0 RNU6-141P-201ENST00000410499 105 ntBASIC-3.34□□□□□ -2.94
VPS29Q9UBQ0 RNU6-394P-201ENST00000410735 107 ntBASIC-3.34□□□□□ -2.94
VPS29Q9UBQ0 AC044792.1-201ENST00000593294 196 ntBASIC-3.34□□□□□ -2.94
VPS29Q9UBQ0 MIR3914-2-201ENST00000637339 95 ntBASIC-3.34□□□□□ -2.94
VPS29Q9UBQ0 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.35□□□□□ -2.95
VPS29Q9UBQ0 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.35□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 267.4 ms