Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 Y_RNA.41-201ENST00000362646 102 ntBASIC-3.1□□□□□ -2.91
CHD7Q9P2D1 Y_RNA.314-201ENST00000365114 102 ntBASIC-3.1□□□□□ -2.91
CHD7Q9P2D1 RNU6-620P-201ENST00000384017 96 ntBASIC-3.11□□□□□ -2.91
CHD7Q9P2D1 RNU7-169P-201ENST00000459456 61 ntBASIC-3.11□□□□□ -2.91
CHD7Q9P2D1 MIR3121-201ENST00000579680 77 ntBASIC-3.11□□□□□ -2.91
CHD7Q9P2D1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-3.11□□□□□ -2.91
CHD7Q9P2D1 MIR548AL-201ENST00000578416 97 ntBASIC-3.11□□□□□ -2.91
CHD7Q9P2D1 RNU6-332P-201ENST00000391193 108 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 MIR1263-201ENST00000408324 86 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 RNU6-986P-201ENST00000363133 102 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 RNU6-795P-201ENST00000516323 103 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 RNU6-264P-201ENST00000517134 104 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 MIR6844-201ENST00000637122 62 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 MIR514A2-201ENST00000385131 88 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 MIR514A3-201ENST00000385132 88 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 Z69908.1-201ENST00000622603 247 ntBASIC-3.12□□□□□ -2.91
CHD7Q9P2D1 SNORD116.1-201ENST00000365628 92 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 RNU6-808P-201ENST00000391233 108 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 MIR548F5-201ENST00000408421 86 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 MIR5009-201ENST00000578736 100 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 MIR4999-201ENST00000585029 91 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 SNORA40.3-201ENST00000390964 122 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 SNORD115-46-201ENST00000390982 71 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.13□□□□□ -2.91
CHD7Q9P2D1 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.14□□□□□ -2.91
CHD7Q9P2D1 RNU6-887P-201ENST00000410660 100 ntBASIC-3.14□□□□□ -2.91
CHD7Q9P2D1 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.14□□□□□ -2.91
CHD7Q9P2D1 Y_RNA.530-201ENST00000384587 101 ntBASIC-3.14□□□□□ -2.91
CHD7Q9P2D1 AC096644.2-201ENST00000429278 159 ntBASIC-3.14□□□□□ -2.91
CHD7Q9P2D1 RNU6-883P-201ENST00000384597 107 ntBASIC-3.15□□□□□ -2.91
CHD7Q9P2D1 AL035470.1-201ENST00000622571 220 ntBASIC-3.15□□□□□ -2.91
CHD7Q9P2D1 RNU6-931P-201ENST00000363850 107 ntBASIC-3.15□□□□□ -2.91
CHD7Q9P2D1 RNU6-895P-201ENST00000384125 103 ntBASIC-3.15□□□□□ -2.91
CHD7Q9P2D1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-3.15□□□□□ -2.91
CHD7Q9P2D1 RNU6-1046P-201ENST00000516538 107 ntBASIC-3.15□□□□□ -2.91
CHD7Q9P2D1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-3.15□□□□□ -2.91
CHD7Q9P2D1 AL160413.1-201ENST00000622780 310 ntBASIC-3.16□□□□□ -2.92
CHD7Q9P2D1 SNORD81.2-201ENST00000365153 76 ntBASIC-3.16□□□□□ -2.92
CHD7Q9P2D1 MTND5P5-201ENST00000503764 376 ntBASIC-3.16□□□□□ -2.92
CHD7Q9P2D1 AC138305.3-201ENST00000624988 240 ntBASIC-3.16□□□□□ -2.92
CHD7Q9P2D1 RNU6-70P-201ENST00000516438 60 ntBASIC-3.17□□□□□ -2.92
CHD7Q9P2D1 RNU6-1192P-201ENST00000612197 107 ntBASIC-3.17□□□□□ -2.92
CHD7Q9P2D1 RNU6-489P-201ENST00000618289 107 ntBASIC-3.17□□□□□ -2.92
CHD7Q9P2D1 SNORD116-6-201ENST00000384711 96 ntBASIC-3.18□□□□□ -2.92
CHD7Q9P2D1 Y_RNA.154-201ENST00000363624 102 ntBASIC-3.18□□□□□ -2.92
CHD7Q9P2D1 RNU6-1289P-201ENST00000384431 106 ntBASIC-3.18□□□□□ -2.92
CHD7Q9P2D1 RNU6-566P-201ENST00000516790 107 ntBASIC-3.18□□□□□ -2.92
CHD7Q9P2D1 MIR4679-2-201ENST00000578358 77 ntBASIC-3.18□□□□□ -2.92
CHD7Q9P2D1 Y_RNA.339-201ENST00000365325 102 ntBASIC-3.19□□□□□ -2.92
CHD7Q9P2D1 SNORD116-24-201ENST00000384549 92 ntBASIC-3.19□□□□□ -2.92
CHD7Q9P2D1 SNORD37.2-201ENST00000391075 66 ntBASIC-3.19□□□□□ -2.92
CHD7Q9P2D1 RNU6-1088P-201ENST00000516850 104 ntBASIC-3.19□□□□□ -2.92
CHD7Q9P2D1 MIR8062-201ENST00000621515 85 ntBASIC-3.19□□□□□ -2.92
CHD7Q9P2D1 RNU6-510P-201ENST00000391239 108 ntBASIC-3.2□□□□□ -2.92
CHD7Q9P2D1 SNORD58.1-201ENST00000391313 66 ntBASIC-3.2□□□□□ -2.92
CHD7Q9P2D1 MIR4668-201ENST00000582284 70 ntBASIC-3.2□□□□□ -2.92
CHD7Q9P2D1 RNU6-411P-201ENST00000384451 107 ntBASIC-3.21□□□□□ -2.92
CHD7Q9P2D1 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.21□□□□□ -2.92
CHD7Q9P2D1 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.21□□□□□ -2.92
CHD7Q9P2D1 RNU6-290P-201ENST00000365212 101 ntBASIC-3.21□□□□□ -2.92
CHD7Q9P2D1 Y_RNA.599-201ENST00000410489 109 ntBASIC-3.21□□□□□ -2.92
CHD7Q9P2D1 MTATP8P2-201ENST00000435212 202 ntBASIC-3.22□□□□□ -2.93
CHD7Q9P2D1 MTND3P10-201ENST00000450967 341 ntBASIC-3.22□□□□□ -2.93
CHD7Q9P2D1 AC099799.1-201ENST00000439809 192 ntBASIC-3.23□□□□□ -2.93
CHD7Q9P2D1 RNU6-122P-201ENST00000516818 107 ntBASIC-3.23□□□□□ -2.93
CHD7Q9P2D1 Y_RNA.337-201ENST00000365312 102 ntBASIC-3.23□□□□□ -2.93
CHD7Q9P2D1 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.23□□□□□ -2.93
CHD7Q9P2D1 MIR4484-201ENST00000582855 83 ntBASIC-3.23□□□□□ -2.93
CHD7Q9P2D1 RNU6-659P-201ENST00000516454 104 ntBASIC-3.24□□□□□ -2.93
CHD7Q9P2D1 MIR1302-6-201ENST00000408466 90 ntBASIC-3.24□□□□□ -2.93
CHD7Q9P2D1 Y_RNA.194-201ENST00000363985 102 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 Y_RNA.485-201ENST00000384395 102 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 MTND2P30-201ENST00000456663 382 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 RPS29P30-201ENST00000600975 111 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 RNU6-633P-201ENST00000362612 103 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 RNU6-326P-201ENST00000365480 107 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 NBR2-204ENST00000587322 63 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 MIR4272-201ENST00000635924 64 ntBASIC-3.25□□□□□ -2.93
CHD7Q9P2D1 RNU6-460P-201ENST00000391158 108 ntBASIC-3.26□□□□□ -2.93
CHD7Q9P2D1 RNU6-904P-201ENST00000516206 101 ntBASIC-3.26□□□□□ -2.93
CHD7Q9P2D1 RNU6-699P-201ENST00000517081 110 ntBASIC-3.26□□□□□ -2.93
CHD7Q9P2D1 AL445567.1-201ENST00000439121 144 ntBASIC-3.27□□□□□ -2.93
CHD7Q9P2D1 RNU6-835P-201ENST00000516974 104 ntBASIC-3.27□□□□□ -2.93
CHD7Q9P2D1 RNU6-451P-201ENST00000362921 107 ntBASIC-3.27□□□□□ -2.93
CHD7Q9P2D1 MTND2P23-201ENST00000422990 651 ntBASIC-3.27□□□□□ -2.93
CHD7Q9P2D1 RNU6-1314P-201ENST00000517139 104 ntBASIC-3.27□□□□□ -2.93
CHD7Q9P2D1 AC078883.4-201ENST00000623218 367 ntBASIC-3.28□□□□□ -2.93
CHD7Q9P2D1 Y_RNA.201-201ENST00000364052 96 ntBASIC-3.28□□□□□ -2.93
CHD7Q9P2D1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-3.28□□□□□ -2.93
CHD7Q9P2D1 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.28□□□□□ -2.93
CHD7Q9P2D1 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.29□□□□□ -2.94
CHD7Q9P2D1 RNU6-380P-201ENST00000410207 107 ntBASIC-3.29□□□□□ -2.94
CHD7Q9P2D1 RNU7-121P-201ENST00000516604 62 ntBASIC-3.29□□□□□ -2.94
CHD7Q9P2D1 RNU6-500P-201ENST00000362349 107 ntBASIC-3.29□□□□□ -2.94
CHD7Q9P2D1 RNU4-33P-201ENST00000364316 85 ntBASIC-3.3□□□□□ -2.94
CHD7Q9P2D1 MIR3938-201ENST00000582157 103 ntBASIC-3.3□□□□□ -2.94
CHD7Q9P2D1 MIR6863-201ENST00000636112 90 ntBASIC-3.3□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms