Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.12□□□□□ -2.43
VSX1Q9NZR4 AC096531.1-201ENST00000419107 107 ntBASIC-0.12□□□□□ -2.43
VSX1Q9NZR4 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
VSX1Q9NZR4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.12□□□□□ -2.43
VSX1Q9NZR4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.12□□□□□ -2.43
VSX1Q9NZR4 AC090617.8-201ENST00000623339 167 ntBASIC-0.12□□□□□ -2.43
VSX1Q9NZR4 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.13□□□□□ -2.43
VSX1Q9NZR4 RNU6-698P-201ENST00000363523 107 ntBASIC-0.13□□□□□ -2.43
VSX1Q9NZR4 RNU6-34P-201ENST00000364874 107 ntBASIC-0.13□□□□□ -2.43
VSX1Q9NZR4 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.13□□□□□ -2.43
VSX1Q9NZR4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.13□□□□□ -2.43
VSX1Q9NZR4 MIR1265-201ENST00000408444 86 ntBASIC-0.13□□□□□ -2.43
VSX1Q9NZR4 RNU6-518P-201ENST00000516056 96 ntBASIC-0.13□□□□□ -2.43
VSX1Q9NZR4 MIR3681-201ENST00000580089 72 ntBASIC-0.13□□□□□ -2.43
VSX1Q9NZR4 SNORA25.4-201ENST00000363666 124 ntBASIC-0.14□□□□□ -2.43
VSX1Q9NZR4 RNA5SP368-201ENST00000364298 116 ntBASIC-0.14□□□□□ -2.43
VSX1Q9NZR4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.14□□□□□ -2.43
VSX1Q9NZR4 MIR214-201ENST00000385214 110 ntBASIC-0.14□□□□□ -2.43
VSX1Q9NZR4 RNU7-174P-201ENST00000516248 59 ntBASIC-0.14□□□□□ -2.43
VSX1Q9NZR4 MIR5589-201ENST00000579442 60 ntBASIC-0.14□□□□□ -2.43
VSX1Q9NZR4 SNORD113-2-201ENST00000391082 72 ntBASIC-0.15□□□□□ -2.43
VSX1Q9NZR4 RNU6-630P-201ENST00000391258 106 ntBASIC-0.15□□□□□ -2.43
VSX1Q9NZR4 AC114801.3-201ENST00000510231 177 ntBASIC-0.15□□□□□ -2.43
VSX1Q9NZR4 U6.111-201ENST00000636093 83 ntBASIC-0.15□□□□□ -2.43
VSX1Q9NZR4 RNU6-30P-201ENST00000384561 107 ntBASIC-0.16□□□□□ -2.44
VSX1Q9NZR4 MIR519A2-201ENST00000384990 87 ntBASIC-0.16□□□□□ -2.44
VSX1Q9NZR4 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.17□□□□□ -2.44
VSX1Q9NZR4 MIR4645-201ENST00000583158 77 ntBASIC-0.17□□□□□ -2.44
VSX1Q9NZR4 AL353803.5-201ENST00000599815 141 ntBASIC-0.17□□□□□ -2.44
VSX1Q9NZR4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.18□□□□□ -2.44
VSX1Q9NZR4 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.18□□□□□ -2.44
VSX1Q9NZR4 RNU6-35P-201ENST00000384530 107 ntBASIC-0.18□□□□□ -2.44
VSX1Q9NZR4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
VSX1Q9NZR4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.19□□□□□ -2.44
VSX1Q9NZR4 RNU6-758P-201ENST00000516292 89 ntBASIC-0.19□□□□□ -2.44
VSX1Q9NZR4 AP001180.6-201ENST00000584918 159 ntBASIC-0.19□□□□□ -2.44
VSX1Q9NZR4 MIR6759-201ENST00000638110 65 ntBASIC-0.19□□□□□ -2.44
VSX1Q9NZR4 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.2□□□□□ -2.44
VSX1Q9NZR4 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.2□□□□□ -2.44
VSX1Q9NZR4 Z95118.1-201ENST00000421372 247 ntBASIC-0.2□□□□□ -2.44
VSX1Q9NZR4 MIR548V-201ENST00000584165 80 ntBASIC-0.2□□□□□ -2.44
VSX1Q9NZR4 AC103706.3-201ENST00000636297 85 ntBASIC-0.2□□□□□ -2.44
VSX1Q9NZR4 MIR429-201ENST00000362106 83 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 MIR604-201ENST00000384880 94 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 SNORA13-201ENST00000458790 133 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 RNA5SP67-201ENST00000516422 131 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 MIR4636-201ENST00000582271 80 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 MIR6854-201ENST00000614935 69 ntBASIC-0.21□□□□□ -2.44
VSX1Q9NZR4 RNU6-800P-201ENST00000384473 103 ntBASIC-0.22□□□□□ -2.44
VSX1Q9NZR4 MIR224-201ENST00000384889 81 ntBASIC-0.22□□□□□ -2.44
VSX1Q9NZR4 snoU13.19-201ENST00000459148 104 ntBASIC-0.22□□□□□ -2.44
VSX1Q9NZR4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.22□□□□□ -2.44
VSX1Q9NZR4 MIR4802-201ENST00000581881 80 ntBASIC-0.22□□□□□ -2.44
VSX1Q9NZR4 AL590491.3-201ENST00000610731 82 ntBASIC-0.22□□□□□ -2.44
VSX1Q9NZR4 AC093726.3-201ENST00000637588 150 ntBASIC-0.22□□□□□ -2.44
VSX1Q9NZR4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.23□□□□□ -2.45
VSX1Q9NZR4 AC005520.4-201ENST00000604337 90 ntBASIC-0.23□□□□□ -2.45
VSX1Q9NZR4 uc_338.36-201ENST00000622331 158 ntBASIC-0.23□□□□□ -2.45
VSX1Q9NZR4 MIR6086-201ENST00000638065 55 ntBASIC-0.23□□□□□ -2.45
VSX1Q9NZR4 SNORD56B-201ENST00000384713 71 ntBASIC-0.24□□□□□ -2.45
VSX1Q9NZR4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.24□□□□□ -2.45
VSX1Q9NZR4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.24□□□□□ -2.45
VSX1Q9NZR4 RPS29P8-201ENST00000445109 171 ntBASIC-0.24□□□□□ -2.45
VSX1Q9NZR4 SNORD57-201ENST00000448188 72 ntBASIC-0.24□□□□□ -2.45
VSX1Q9NZR4 MIR4280-201ENST00000582178 76 ntBASIC-0.24□□□□□ -2.45
VSX1Q9NZR4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.24□□□□□ -2.45
VSX1Q9NZR4 RNU6-590P-201ENST00000365039 107 ntBASIC-0.25□□□□□ -2.45
VSX1Q9NZR4 MIR4511-201ENST00000582784 87 ntBASIC-0.25□□□□□ -2.45
VSX1Q9NZR4 MIR6851-201ENST00000617060 67 ntBASIC-0.25□□□□□ -2.45
VSX1Q9NZR4 MIR101-1-201ENST00000362265 75 ntBASIC-0.26□□□□□ -2.45
VSX1Q9NZR4 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
VSX1Q9NZR4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.26□□□□□ -2.45
VSX1Q9NZR4 MIR4493-201ENST00000584016 73 ntBASIC-0.26□□□□□ -2.45
VSX1Q9NZR4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.26□□□□□ -2.45
VSX1Q9NZR4 MIR4788-201ENST00000639104 80 ntBASIC-0.26□□□□□ -2.45
VSX1Q9NZR4 RNU6-924P-201ENST00000362926 108 ntBASIC-0.27□□□□□ -2.45
VSX1Q9NZR4 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.27□□□□□ -2.45
VSX1Q9NZR4 MIR630-201ENST00000384957 97 ntBASIC-0.27□□□□□ -2.45
VSX1Q9NZR4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
VSX1Q9NZR4 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.27□□□□□ -2.45
VSX1Q9NZR4 AC108676.2-201ENST00000605225 163 ntBASIC-0.27□□□□□ -2.45
VSX1Q9NZR4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.28□□□□□ -2.45
VSX1Q9NZR4 U4.4-201ENST00000620626 117 ntBASIC-0.28□□□□□ -2.45
VSX1Q9NZR4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.29□□□□□ -2.46
VSX1Q9NZR4 RNU6-471P-201ENST00000383944 106 ntBASIC-0.29□□□□□ -2.46
VSX1Q9NZR4 RNU6-92P-201ENST00000605893 104 ntBASIC-0.29□□□□□ -2.46
VSX1Q9NZR4 MIR527-201ENST00000385244 85 ntBASIC-0.3□□□□□ -2.46
VSX1Q9NZR4 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.3□□□□□ -2.46
VSX1Q9NZR4 AL445193.1-201ENST00000441183 141 ntBASIC-0.3□□□□□ -2.46
VSX1Q9NZR4 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.31□□□□□ -2.46
VSX1Q9NZR4 MIR518B-201ENST00000385127 83 ntBASIC-0.31□□□□□ -2.46
VSX1Q9NZR4 SNORD126-201ENST00000459475 77 ntBASIC-0.31□□□□□ -2.46
VSX1Q9NZR4 AL445584.3-201ENST00000617173 78 ntBASIC-0.31□□□□□ -2.46
VSX1Q9NZR4 MIR204-201ENST00000385200 110 ntBASIC-0.32□□□□□ -2.46
VSX1Q9NZR4 RNA5SP25-201ENST00000410815 110 ntBASIC-0.32□□□□□ -2.46
VSX1Q9NZR4 AC114755.3-201ENST00000481111 251 ntBASIC-0.32□□□□□ -2.46
VSX1Q9NZR4 MIR4436A-201ENST00000585278 85 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 312.7 ms