Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNU4-54P-201ENST00000516428 129 ntBASIC0.91□□□□□ -2.26
CUEDC1Q9NWM3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CUEDC1Q9NWM3 SNORD45.2-201ENST00000363552 72 ntBASIC0.9□□□□□ -2.27
CUEDC1Q9NWM3 MIR4432-201ENST00000581823 84 ntBASIC0.9□□□□□ -2.27
CUEDC1Q9NWM3 MIR924-201ENST00000638017 53 ntBASIC0.9□□□□□ -2.27
CUEDC1Q9NWM3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.89□□□□□ -2.27
CUEDC1Q9NWM3 Y_RNA.698-201ENST00000516798 118 ntBASIC0.89□□□□□ -2.27
CUEDC1Q9NWM3 AP000676.1-201ENST00000533307 52 ntBASIC0.89□□□□□ -2.27
CUEDC1Q9NWM3 SNORA62.4-201ENST00000365504 151 ntBASIC0.88□□□□□ -2.27
CUEDC1Q9NWM3 SNORD57-201ENST00000448188 72 ntBASIC0.88□□□□□ -2.27
CUEDC1Q9NWM3 AC010487.4-201ENST00000637027 61 ntBASIC0.88□□□□□ -2.27
CUEDC1Q9NWM3 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
CUEDC1Q9NWM3 MIR6513-201ENST00000621188 64 ntBASIC0.87□□□□□ -2.27
CUEDC1Q9NWM3 RNA5SP98-201ENST00000363158 137 ntBASIC0.86□□□□□ -2.27
CUEDC1Q9NWM3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.86□□□□□ -2.27
CUEDC1Q9NWM3 SNORD114-23-201ENST00000363536 72 ntBASIC0.86□□□□□ -2.27
CUEDC1Q9NWM3 RNU6-945P-201ENST00000383947 107 ntBASIC0.86□□□□□ -2.27
CUEDC1Q9NWM3 RNU6-1250P-201ENST00000391218 107 ntBASIC0.86□□□□□ -2.27
CUEDC1Q9NWM3 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
CUEDC1Q9NWM3 RNU6-1267P-201ENST00000410747 107 ntBASIC0.85□□□□□ -2.27
CUEDC1Q9NWM3 RNA5SP121-201ENST00000516537 101 ntBASIC0.85□□□□□ -2.27
CUEDC1Q9NWM3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.85□□□□□ -2.27
CUEDC1Q9NWM3 RNU6-1204P-201ENST00000363948 107 ntBASIC0.84□□□□□ -2.27
CUEDC1Q9NWM3 SNORD63.1-201ENST00000516178 80 ntBASIC0.83□□□□□ -2.28
CUEDC1Q9NWM3 U7.5-201ENST00000517224 61 ntBASIC0.83□□□□□ -2.28
CUEDC1Q9NWM3 MIR499B-201ENST00000636498 73 ntBASIC0.83□□□□□ -2.28
CUEDC1Q9NWM3 Y_RNA.139-201ENST00000363464 102 ntBASIC0.82□□□□□ -2.28
CUEDC1Q9NWM3 RNU7-55P-201ENST00000459426 62 ntBASIC0.82□□□□□ -2.28
CUEDC1Q9NWM3 RNU6-1174P-201ENST00000517278 101 ntBASIC0.82□□□□□ -2.28
CUEDC1Q9NWM3 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
CUEDC1Q9NWM3 MIR4464-201ENST00000580818 92 ntBASIC0.82□□□□□ -2.28
CUEDC1Q9NWM3 MIR6888-201ENST00000621977 67 ntBASIC0.82□□□□□ -2.28
CUEDC1Q9NWM3 RNU6-973P-201ENST00000364690 107 ntBASIC0.81□□□□□ -2.28
CUEDC1Q9NWM3 RNU6-1133P-201ENST00000410963 100 ntBASIC0.81□□□□□ -2.28
CUEDC1Q9NWM3 AL445584.3-201ENST00000617173 78 ntBASIC0.81□□□□□ -2.28
CUEDC1Q9NWM3 uc_338.17-201ENST00000619633 179 ntBASIC0.81□□□□□ -2.28
CUEDC1Q9NWM3 AL391099.1-201ENST00000624635 187 ntBASIC0.81□□□□□ -2.28
CUEDC1Q9NWM3 RNA5SP257-201ENST00000363023 116 ntBASIC0.8□□□□□ -2.28
CUEDC1Q9NWM3 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
CUEDC1Q9NWM3 MIR936-201ENST00000401264 98 ntBASIC0.8□□□□□ -2.28
CUEDC1Q9NWM3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
CUEDC1Q9NWM3 RNU7-129P-201ENST00000516128 62 ntBASIC0.8□□□□□ -2.28
CUEDC1Q9NWM3 RNA5SP330-201ENST00000517096 96 ntBASIC0.8□□□□□ -2.28
CUEDC1Q9NWM3 RNU6-986P-201ENST00000363133 102 ntBASIC0.79□□□□□ -2.28
CUEDC1Q9NWM3 SNORD44.1-201ENST00000363202 61 ntBASIC0.79□□□□□ -2.28
CUEDC1Q9NWM3 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
CUEDC1Q9NWM3 AC108740.1-201ENST00000498629 225 ntBASIC0.79□□□□□ -2.28
CUEDC1Q9NWM3 AC104408.1-201ENST00000605241 170 ntBASIC0.79□□□□□ -2.28
CUEDC1Q9NWM3 Y_RNA.613-201ENST00000410726 97 ntBASIC0.78□□□□□ -2.28
CUEDC1Q9NWM3 MIR8087-201ENST00000612745 78 ntBASIC0.78□□□□□ -2.28
CUEDC1Q9NWM3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CUEDC1Q9NWM3 Y_RNA.321-201ENST00000365149 102 ntBASIC0.77□□□□□ -2.29
CUEDC1Q9NWM3 RNU6-900P-201ENST00000384498 102 ntBASIC0.77□□□□□ -2.29
CUEDC1Q9NWM3 RNU7-88P-201ENST00000458752 63 ntBASIC0.77□□□□□ -2.29
CUEDC1Q9NWM3 MIR330-201ENST00000362196 94 ntBASIC0.76□□□□□ -2.29
CUEDC1Q9NWM3 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
CUEDC1Q9NWM3 AC096531.1-201ENST00000419107 107 ntBASIC0.75□□□□□ -2.29
CUEDC1Q9NWM3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.75□□□□□ -2.29
CUEDC1Q9NWM3 MTRNR2L9-201ENST00000622562 75 ntBASIC0.74□□□□□ -2.29
CUEDC1Q9NWM3 MIR29B1-201ENST00000385015 81 ntBASIC0.73□□□□□ -2.29
CUEDC1Q9NWM3 MIR3170-201ENST00000582699 77 ntBASIC0.73□□□□□ -2.29
CUEDC1Q9NWM3 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
CUEDC1Q9NWM3 RNU6-742P-201ENST00000365289 107 ntBASIC0.72□□□□□ -2.29
CUEDC1Q9NWM3 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
CUEDC1Q9NWM3 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-822P-201ENST00000362707 106 ntBASIC0.71□□□□□ -2.3
CUEDC1Q9NWM3 SNORD63.2-201ENST00000516303 64 ntBASIC0.71□□□□□ -2.3
CUEDC1Q9NWM3 CR383656.4-201ENST00000546909 122 ntBASIC0.71□□□□□ -2.3
CUEDC1Q9NWM3 MIR4711-201ENST00000578274 70 ntBASIC0.71□□□□□ -2.3
CUEDC1Q9NWM3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
CUEDC1Q9NWM3 RNA5SP62-201ENST00000363457 110 ntBASIC0.7□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-974P-201ENST00000384099 108 ntBASIC0.7□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-127P-201ENST00000390897 107 ntBASIC0.7□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-1111P-201ENST00000391118 107 ntBASIC0.7□□□□□ -2.3
CUEDC1Q9NWM3 uc_338.36-201ENST00000622331 158 ntBASIC0.7□□□□□ -2.3
CUEDC1Q9NWM3 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-724P-201ENST00000390958 105 ntBASIC0.69□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-721P-201ENST00000410155 105 ntBASIC0.69□□□□□ -2.3
CUEDC1Q9NWM3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.69□□□□□ -2.3
CUEDC1Q9NWM3 MIR148A-201ENST00000362215 68 ntBASIC0.68□□□□□ -2.3
CUEDC1Q9NWM3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
CUEDC1Q9NWM3 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-732P-201ENST00000516033 103 ntBASIC0.67□□□□□ -2.3
CUEDC1Q9NWM3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.67□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-455P-201ENST00000384681 107 ntBASIC0.66□□□□□ -2.3
CUEDC1Q9NWM3 RNU6-1238P-201ENST00000517215 102 ntBASIC0.66□□□□□ -2.3
CUEDC1Q9NWM3 MIR6514-201ENST00000622549 70 ntBASIC0.66□□□□□ -2.3
CUEDC1Q9NWM3 MIR1468-201ENST00000410600 86 ntBASIC0.65□□□□□ -2.31
CUEDC1Q9NWM3 U6.103-201ENST00000637085 61 ntBASIC0.64□□□□□ -2.31
CUEDC1Q9NWM3 MIR103A1-201ENST00000362165 78 ntBASIC0.63□□□□□ -2.31
CUEDC1Q9NWM3 RNU6-530P-201ENST00000391180 107 ntBASIC0.63□□□□□ -2.31
CUEDC1Q9NWM3 MIR892B-201ENST00000401279 77 ntBASIC0.63□□□□□ -2.31
CUEDC1Q9NWM3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.63□□□□□ -2.31
CUEDC1Q9NWM3 SNORA68.3-201ENST00000515906 83 ntBASIC0.63□□□□□ -2.31
CUEDC1Q9NWM3 RNA5SP476-201ENST00000516613 103 ntBASIC0.63□□□□□ -2.31
CUEDC1Q9NWM3 RNU6-180P-201ENST00000516697 61 ntBASIC0.63□□□□□ -2.31
CUEDC1Q9NWM3 MIR6854-201ENST00000614935 69 ntBASIC0.63□□□□□ -2.31
CUEDC1Q9NWM3 MIRLET7D-201ENST00000362263 87 ntBASIC0.62□□□□□ -2.31
CUEDC1Q9NWM3 MIR1197-201ENST00000408818 88 ntBASIC0.62□□□□□ -2.31
CUEDC1Q9NWM3 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms