Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 SNORD114-31-201ENST00000363219 75 ntBASIC-0.35□□□□□ -2.47
TDP1Q9NUW8 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.35□□□□□ -2.47
TDP1Q9NUW8 MIR519A2-201ENST00000384990 87 ntBASIC-0.35□□□□□ -2.47
TDP1Q9NUW8 MIR4280-201ENST00000582178 76 ntBASIC-0.35□□□□□ -2.47
TDP1Q9NUW8 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.36□□□□□ -2.47
TDP1Q9NUW8 RNU6-668P-201ENST00000364180 107 ntBASIC-0.36□□□□□ -2.47
TDP1Q9NUW8 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.36□□□□□ -2.47
TDP1Q9NUW8 RNU7-154P-201ENST00000516194 62 ntBASIC-0.36□□□□□ -2.47
TDP1Q9NUW8 RNU6-523P-201ENST00000516304 54 ntBASIC-0.36□□□□□ -2.47
TDP1Q9NUW8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.38□□□□□ -2.47
TDP1Q9NUW8 MIR4662A-201ENST00000637499 67 ntBASIC-0.38□□□□□ -2.47
TDP1Q9NUW8 SNORD116-24-201ENST00000384549 92 ntBASIC-0.39□□□□□ -2.47
TDP1Q9NUW8 RNU6-634P-201ENST00000459134 106 ntBASIC-0.39□□□□□ -2.47
TDP1Q9NUW8 MIR6854-201ENST00000614935 69 ntBASIC-0.39□□□□□ -2.47
TDP1Q9NUW8 AC093726.3-201ENST00000637588 150 ntBASIC-0.39□□□□□ -2.47
TDP1Q9NUW8 RNU6-776P-201ENST00000364403 104 ntBASIC-0.4□□□□□ -2.47
TDP1Q9NUW8 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.4□□□□□ -2.47
TDP1Q9NUW8 SNORA62.4-201ENST00000365504 151 ntBASIC-0.4□□□□□ -2.47
TDP1Q9NUW8 MIR4645-201ENST00000583158 77 ntBASIC-0.4□□□□□ -2.47
TDP1Q9NUW8 MIR6851-201ENST00000617060 67 ntBASIC-0.4□□□□□ -2.47
TDP1Q9NUW8 MIR8068-201ENST00000618032 68 ntBASIC-0.4□□□□□ -2.47
TDP1Q9NUW8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.41□□□□□ -2.48
TDP1Q9NUW8 AC114755.3-201ENST00000481111 251 ntBASIC-0.41□□□□□ -2.48
TDP1Q9NUW8 RNU7-174P-201ENST00000516248 59 ntBASIC-0.41□□□□□ -2.48
TDP1Q9NUW8 RNA5SP476-201ENST00000516613 103 ntBASIC-0.41□□□□□ -2.48
TDP1Q9NUW8 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.41□□□□□ -2.48
TDP1Q9NUW8 SNORD38.3-201ENST00000516599 73 ntBASIC-0.42□□□□□ -2.48
TDP1Q9NUW8 AP001180.6-201ENST00000584918 159 ntBASIC-0.42□□□□□ -2.48
TDP1Q9NUW8 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.43□□□□□ -2.48
TDP1Q9NUW8 MIR517B-201ENST00000385102 67 ntBASIC-0.43□□□□□ -2.48
TDP1Q9NUW8 RNA5SP215-201ENST00000363440 122 ntBASIC-0.44□□□□□ -2.48
TDP1Q9NUW8 RNU6-540P-201ENST00000384622 101 ntBASIC-0.44□□□□□ -2.48
TDP1Q9NUW8 MIR1265-201ENST00000408444 86 ntBASIC-0.44□□□□□ -2.48
TDP1Q9NUW8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
TDP1Q9NUW8 MIR4464-201ENST00000580818 92 ntBASIC-0.44□□□□□ -2.48
TDP1Q9NUW8 MIR6086-201ENST00000638065 55 ntBASIC-0.44□□□□□ -2.48
TDP1Q9NUW8 RNU6-871P-201ENST00000516122 100 ntBASIC-0.45□□□□□ -2.48
TDP1Q9NUW8 MIR4493-201ENST00000584016 73 ntBASIC-0.45□□□□□ -2.48
TDP1Q9NUW8 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.46□□□□□ -2.48
TDP1Q9NUW8 RNU6-638P-201ENST00000516582 104 ntBASIC-0.46□□□□□ -2.48
TDP1Q9NUW8 MIR548V-201ENST00000584165 80 ntBASIC-0.46□□□□□ -2.48
TDP1Q9NUW8 RNU6-698P-201ENST00000363523 107 ntBASIC-0.47□□□□□ -2.48
TDP1Q9NUW8 RNU6-34P-201ENST00000364874 107 ntBASIC-0.47□□□□□ -2.48
TDP1Q9NUW8 MIR6888-201ENST00000621977 67 ntBASIC-0.47□□□□□ -2.48
TDP1Q9NUW8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.48□□□□□ -2.49
TDP1Q9NUW8 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.48□□□□□ -2.49
TDP1Q9NUW8 RNU6-663P-201ENST00000391105 106 ntBASIC-0.48□□□□□ -2.49
TDP1Q9NUW8 AL445584.3-201ENST00000617173 78 ntBASIC-0.48□□□□□ -2.49
TDP1Q9NUW8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.49□□□□□ -2.49
TDP1Q9NUW8 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.49□□□□□ -2.49
TDP1Q9NUW8 RNA5SP169-201ENST00000517268 117 ntBASIC-0.49□□□□□ -2.49
TDP1Q9NUW8 MIR548AG1-201ENST00000579932 66 ntBASIC-0.49□□□□□ -2.49
TDP1Q9NUW8 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.5□□□□□ -2.49
TDP1Q9NUW8 MIR204-201ENST00000385200 110 ntBASIC-0.5□□□□□ -2.49
TDP1Q9NUW8 Z95118.1-201ENST00000421372 247 ntBASIC-0.5□□□□□ -2.49
TDP1Q9NUW8 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.5□□□□□ -2.49
TDP1Q9NUW8 AC108676.2-201ENST00000605225 163 ntBASIC-0.5□□□□□ -2.49
TDP1Q9NUW8 U4.4-201ENST00000620626 117 ntBASIC-0.5□□□□□ -2.49
TDP1Q9NUW8 MIR101-1-201ENST00000362265 75 ntBASIC-0.51□□□□□ -2.49
TDP1Q9NUW8 MIR8064-201ENST00000612863 90 ntBASIC-0.51□□□□□ -2.49
TDP1Q9NUW8 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.52□□□□□ -2.49
TDP1Q9NUW8 MIR630-201ENST00000384957 97 ntBASIC-0.52□□□□□ -2.49
TDP1Q9NUW8 MIR518B-201ENST00000385127 83 ntBASIC-0.52□□□□□ -2.49
TDP1Q9NUW8 HAR1A.1-201ENST00000459583 118 ntBASIC-0.52□□□□□ -2.49
TDP1Q9NUW8 SNORD14C-201ENST00000365382 88 ntBASIC-0.53□□□□□ -2.49
TDP1Q9NUW8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
TDP1Q9NUW8 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.53□□□□□ -2.49
TDP1Q9NUW8 MIR124-2-201ENST00000385081 109 ntBASIC-0.53□□□□□ -2.49
TDP1Q9NUW8 SNORD30.1-201ENST00000391309 70 ntBASIC-0.53□□□□□ -2.49
TDP1Q9NUW8 RNU6-758P-201ENST00000516292 89 ntBASIC-0.53□□□□□ -2.49
TDP1Q9NUW8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
TDP1Q9NUW8 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.54□□□□□ -2.5
TDP1Q9NUW8 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
TDP1Q9NUW8 SNORD74.6-201ENST00000364796 70 ntBASIC-0.55□□□□□ -2.5
TDP1Q9NUW8 RNU6-630P-201ENST00000391258 106 ntBASIC-0.55□□□□□ -2.5
TDP1Q9NUW8 SNORA13-201ENST00000458790 133 ntBASIC-0.55□□□□□ -2.5
TDP1Q9NUW8 SNORD22.1-201ENST00000516331 125 ntBASIC-0.55□□□□□ -2.5
TDP1Q9NUW8 RNU6-649P-201ENST00000384463 107 ntBASIC-0.56□□□□□ -2.5
TDP1Q9NUW8 MIR604-201ENST00000384880 94 ntBASIC-0.56□□□□□ -2.5
TDP1Q9NUW8 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
TDP1Q9NUW8 SNORD113-2-201ENST00000391082 72 ntBASIC-0.56□□□□□ -2.5
TDP1Q9NUW8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.56□□□□□ -2.5
TDP1Q9NUW8 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.57□□□□□ -2.5
TDP1Q9NUW8 RNU6-542P-201ENST00000516405 103 ntBASIC-0.57□□□□□ -2.5
TDP1Q9NUW8 SNORA32.3-201ENST00000384772 121 ntBASIC-0.59□□□□□ -2.5
TDP1Q9NUW8 MIR3179-1-201ENST00000578940 84 ntBASIC-0.59□□□□□ -2.5
TDP1Q9NUW8 MIR3179-2-201ENST00000579107 84 ntBASIC-0.59□□□□□ -2.5
TDP1Q9NUW8 MIR3179-3-201ENST00000579566 84 ntBASIC-0.59□□□□□ -2.5
TDP1Q9NUW8 MIR3179-4-201ENST00000617599 84 ntBASIC-0.59□□□□□ -2.5
TDP1Q9NUW8 RNU6-924P-201ENST00000362926 108 ntBASIC-0.6□□□□□ -2.51
TDP1Q9NUW8 SNORA25.4-201ENST00000363666 124 ntBASIC-0.6□□□□□ -2.51
TDP1Q9NUW8 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.6□□□□□ -2.51
TDP1Q9NUW8 MIR527-201ENST00000385244 85 ntBASIC-0.6□□□□□ -2.51
TDP1Q9NUW8 RNA5SP451-201ENST00000410588 110 ntBASIC-0.6□□□□□ -2.51
TDP1Q9NUW8 RNU6-539P-201ENST00000516665 103 ntBASIC-0.6□□□□□ -2.51
TDP1Q9NUW8 U6.111-201ENST00000636093 83 ntBASIC-0.6□□□□□ -2.51
TDP1Q9NUW8 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.61□□□□□ -2.51
TDP1Q9NUW8 SNORD75.1-201ENST00000408373 60 ntBASIC-0.61□□□□□ -2.51
TDP1Q9NUW8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.61□□□□□ -2.51
TDP1Q9NUW8 SNORD18.2-201ENST00000459604 70 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms