Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
FOXD4L1Q9NU39 RNU6-455P-201ENST00000384681 107 ntBASIC1.15□□□□□ -2.23
FOXD4L1Q9NU39 MIR643-201ENST00000385267 97 ntBASIC1.15□□□□□ -2.23
FOXD4L1Q9NU39 SNORD63.2-201ENST00000516303 64 ntBASIC1.15□□□□□ -2.23
FOXD4L1Q9NU39 RNA5SP121-201ENST00000516537 101 ntBASIC1.14□□□□□ -2.23
FOXD4L1Q9NU39 RNU6-986P-201ENST00000363133 102 ntBASIC1.13□□□□□ -2.23
FOXD4L1Q9NU39 RNU6-42P-201ENST00000384165 107 ntBASIC1.13□□□□□ -2.23
FOXD4L1Q9NU39 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.13□□□□□ -2.23
FOXD4L1Q9NU39 RNA5SP220-201ENST00000516298 104 ntBASIC1.13□□□□□ -2.23
FOXD4L1Q9NU39 CR383656.4-201ENST00000546909 122 ntBASIC1.13□□□□□ -2.23
FOXD4L1Q9NU39 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
FOXD4L1Q9NU39 Y_RNA.321-201ENST00000365149 102 ntBASIC1.12□□□□□ -2.23
FOXD4L1Q9NU39 RNU6-1111P-201ENST00000391118 107 ntBASIC1.12□□□□□ -2.23
FOXD4L1Q9NU39 MIR3973-201ENST00000579824 107 ntBASIC1.12□□□□□ -2.23
FOXD4L1Q9NU39 MIR3170-201ENST00000582699 77 ntBASIC1.11□□□□□ -2.23
FOXD4L1Q9NU39 RNU6-815P-201ENST00000384080 113 ntBASIC1.1□□□□□ -2.23
FOXD4L1Q9NU39 MIR520E-201ENST00000384867 87 ntBASIC1.1□□□□□ -2.23
FOXD4L1Q9NU39 RNA5SP62-201ENST00000363457 110 ntBASIC1.09□□□□□ -2.23
FOXD4L1Q9NU39 snoU13.18-201ENST00000459483 104 ntBASIC1.09□□□□□ -2.23
FOXD4L1Q9NU39 AC104408.1-201ENST00000605241 170 ntBASIC1.09□□□□□ -2.23
FOXD4L1Q9NU39 MIRLET7D-201ENST00000362263 87 ntBASIC1.08□□□□□ -2.24
FOXD4L1Q9NU39 RNU6-974P-201ENST00000384099 108 ntBASIC1.08□□□□□ -2.24
FOXD4L1Q9NU39 RNA5SP163-201ENST00000410304 99 ntBASIC1.08□□□□□ -2.24
FOXD4L1Q9NU39 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
FOXD4L1Q9NU39 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
FOXD4L1Q9NU39 RPL39P28-201ENST00000465655 155 ntBASIC1.07□□□□□ -2.24
FOXD4L1Q9NU39 RNU6-1238P-201ENST00000517215 102 ntBASIC1.07□□□□□ -2.24
FOXD4L1Q9NU39 MIR148A-201ENST00000362215 68 ntBASIC1.06□□□□□ -2.24
FOXD4L1Q9NU39 MIR489-201ENST00000384923 84 ntBASIC1.06□□□□□ -2.24
FOXD4L1Q9NU39 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.06□□□□□ -2.24
FOXD4L1Q9NU39 MTRNR2L9-201ENST00000622562 75 ntBASIC1.06□□□□□ -2.24
FOXD4L1Q9NU39 RNU6-901P-201ENST00000384593 106 ntBASIC1.05□□□□□ -2.24
FOXD4L1Q9NU39 RNU6-732P-201ENST00000516033 103 ntBASIC1.05□□□□□ -2.24
FOXD4L1Q9NU39 MIR5704-201ENST00000584029 77 ntBASIC1.04□□□□□ -2.24
FOXD4L1Q9NU39 MIR6854-201ENST00000614935 69 ntBASIC1.04□□□□□ -2.24
FOXD4L1Q9NU39 MIR29B1-201ENST00000385015 81 ntBASIC1.03□□□□□ -2.24
FOXD4L1Q9NU39 RNU6-1250P-201ENST00000391218 107 ntBASIC1.02□□□□□ -2.25
FOXD4L1Q9NU39 MIR892B-201ENST00000401279 77 ntBASIC1.02□□□□□ -2.25
FOXD4L1Q9NU39 AC069113.3-201ENST00000521019 150 ntBASIC1.02□□□□□ -2.25
FOXD4L1Q9NU39 MIR548Q-201ENST00000408404 100 ntBASIC1.01□□□□□ -2.25
FOXD4L1Q9NU39 RNU6-721P-201ENST00000410155 105 ntBASIC1□□□□□ -2.25
FOXD4L1Q9NU39 MIR6515-201ENST00000619843 57 ntBASIC1□□□□□ -2.25
FOXD4L1Q9NU39 RNA5SP325-201ENST00000363756 130 ntBASIC0.99□□□□□ -2.25
FOXD4L1Q9NU39 SNORD114-2-201ENST00000363953 78 ntBASIC0.99□□□□□ -2.25
FOXD4L1Q9NU39 RNU1-93P-201ENST00000364704 169 ntBASIC0.99□□□□□ -2.25
FOXD4L1Q9NU39 MIR216A-201ENST00000385063 110 ntBASIC0.99□□□□□ -2.25
FOXD4L1Q9NU39 MIR124-2-201ENST00000385081 109 ntBASIC0.99□□□□□ -2.25
FOXD4L1Q9NU39 RNU6-180P-201ENST00000516697 61 ntBASIC0.99□□□□□ -2.25
FOXD4L1Q9NU39 RNU6-530P-201ENST00000391180 107 ntBASIC0.98□□□□□ -2.25
FOXD4L1Q9NU39 MIR6507-201ENST00000613630 70 ntBASIC0.98□□□□□ -2.25
FOXD4L1Q9NU39 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
FOXD4L1Q9NU39 RNU6-742P-201ENST00000365289 107 ntBASIC0.97□□□□□ -2.25
FOXD4L1Q9NU39 RNU6-1223P-201ENST00000517124 104 ntBASIC0.97□□□□□ -2.25
FOXD4L1Q9NU39 MIR151B-201ENST00000584249 96 ntBASIC0.97□□□□□ -2.25
FOXD4L1Q9NU39 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
FOXD4L1Q9NU39 RNU6-822P-201ENST00000362707 106 ntBASIC0.96□□□□□ -2.26
FOXD4L1Q9NU39 MIR8068-201ENST00000618032 68 ntBASIC0.96□□□□□ -2.26
FOXD4L1Q9NU39 MIR146A-201ENST00000385201 99 ntBASIC0.95□□□□□ -2.26
FOXD4L1Q9NU39 MIR6788-201ENST00000618842 66 ntBASIC0.95□□□□□ -2.26
FOXD4L1Q9NU39 RNU6-351P-201ENST00000516097 100 ntBASIC0.94□□□□□ -2.26
FOXD4L1Q9NU39 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.93□□□□□ -2.26
FOXD4L1Q9NU39 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
FOXD4L1Q9NU39 RNU6-1233P-201ENST00000362922 102 ntBASIC0.92□□□□□ -2.26
FOXD4L1Q9NU39 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
FOXD4L1Q9NU39 RNA5SP436-201ENST00000516020 115 ntBASIC0.92□□□□□ -2.26
FOXD4L1Q9NU39 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.91□□□□□ -2.26
FOXD4L1Q9NU39 MIR610-201ENST00000385139 96 ntBASIC0.9□□□□□ -2.27
FOXD4L1Q9NU39 MIR1468-201ENST00000410600 86 ntBASIC0.9□□□□□ -2.27
FOXD4L1Q9NU39 AC090625.1-201ENST00000357130 210 ntBASIC0.89□□□□□ -2.27
FOXD4L1Q9NU39 RNU6-724P-201ENST00000390958 105 ntBASIC0.89□□□□□ -2.27
FOXD4L1Q9NU39 AC022709.1-201ENST00000615967 87 ntBASIC0.89□□□□□ -2.27
FOXD4L1Q9NU39 SNORA42.1-201ENST00000363515 137 ntBASIC0.88□□□□□ -2.27
FOXD4L1Q9NU39 MIR548H2-201ENST00000408874 88 ntBASIC0.88□□□□□ -2.27
FOXD4L1Q9NU39 Y_RNA.699-201ENST00000516803 93 ntBASIC0.88□□□□□ -2.27
FOXD4L1Q9NU39 MIR6866-201ENST00000638146 69 ntBASIC0.87□□□□□ -2.27
FOXD4L1Q9NU39 SNORD56B-201ENST00000384713 71 ntBASIC0.86□□□□□ -2.27
FOXD4L1Q9NU39 CYP3A137P-201ENST00000562436 69 ntBASIC0.85□□□□□ -2.27
FOXD4L1Q9NU39 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
FOXD4L1Q9NU39 RNU6-1327P-201ENST00000365302 105 ntBASIC0.84□□□□□ -2.27
FOXD4L1Q9NU39 MIR593-201ENST00000384856 100 ntBASIC0.84□□□□□ -2.27
FOXD4L1Q9NU39 MIR598-201ENST00000384868 97 ntBASIC0.84□□□□□ -2.27
FOXD4L1Q9NU39 MIR5000-201ENST00000577717 103 ntBASIC0.84□□□□□ -2.27
FOXD4L1Q9NU39 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
FOXD4L1Q9NU39 MIR4315-1-201ENST00000636800 73 ntBASIC0.82□□□□□ -2.28
FOXD4L1Q9NU39 MIR4315-2-201ENST00000640925 73 ntBASIC0.82□□□□□ -2.28
FOXD4L1Q9NU39 AC244250.2-201ENST00000418731 148 ntBASIC0.81□□□□□ -2.28
FOXD4L1Q9NU39 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.81□□□□□ -2.28
FOXD4L1Q9NU39 MIR4743-201ENST00000584576 69 ntBASIC0.81□□□□□ -2.28
FOXD4L1Q9NU39 SNORA27.2-201ENST00000363365 126 ntBASIC0.8□□□□□ -2.28
FOXD4L1Q9NU39 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
FOXD4L1Q9NU39 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 SNORD19-201ENST00000391191 68 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 AL445193.1-201ENST00000441183 141 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 RNU7-159P-201ENST00000459284 62 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 AC114755.3-201ENST00000481111 251 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 RNA5SP480-201ENST00000516840 109 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 PVT1_3.1-201ENST00000620853 95 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
FOXD4L1Q9NU39 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 260.2 ms