Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MIR224-201ENST00000384889 81 ntBASIC-1.15□□□□□ -2.59
CHMP1AQ9HD42 SNORD64-201ENST00000386683 67 ntBASIC-1.15□□□□□ -2.59
CHMP1AQ9HD42 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
CHMP1AQ9HD42 MIR494-201ENST00000349529 81 ntBASIC-1.16□□□□□ -2.6
CHMP1AQ9HD42 SNORD115-22-201ENST00000364456 82 ntBASIC-1.16□□□□□ -2.6
CHMP1AQ9HD42 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.16□□□□□ -2.6
CHMP1AQ9HD42 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.16□□□□□ -2.6
CHMP1AQ9HD42 RNU7-174P-201ENST00000516248 59 ntBASIC-1.16□□□□□ -2.6
CHMP1AQ9HD42 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.16□□□□□ -2.6
CHMP1AQ9HD42 RNU6-294P-201ENST00000364999 102 ntBASIC-1.17□□□□□ -2.6
CHMP1AQ9HD42 MT-TQ-201ENST00000387372 72 ntBASIC-1.17□□□□□ -2.6
CHMP1AQ9HD42 RNU6-758P-201ENST00000516292 89 ntBASIC-1.17□□□□□ -2.6
CHMP1AQ9HD42 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.18□□□□□ -2.6
CHMP1AQ9HD42 MIR450A2-201ENST00000385022 100 ntBASIC-1.18□□□□□ -2.6
CHMP1AQ9HD42 MIR664A-201ENST00000626086 82 ntBASIC-1.18□□□□□ -2.6
CHMP1AQ9HD42 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.19□□□□□ -2.6
CHMP1AQ9HD42 RNU6-246P-201ENST00000384702 107 ntBASIC-1.19□□□□□ -2.6
CHMP1AQ9HD42 MIR5582-201ENST00000579697 68 ntBASIC-1.19□□□□□ -2.6
CHMP1AQ9HD42 MIR4712-201ENST00000583750 82 ntBASIC-1.19□□□□□ -2.6
CHMP1AQ9HD42 MIR1245B-201ENST00000636115 69 ntBASIC-1.19□□□□□ -2.6
CHMP1AQ9HD42 MIR196A1-201ENST00000388006 70 ntBASIC-1.2□□□□□ -2.6
CHMP1AQ9HD42 SNORA26.4-201ENST00000391188 123 ntBASIC-1.2□□□□□ -2.6
CHMP1AQ9HD42 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.21□□□□□ -2.6
CHMP1AQ9HD42 AL500527.2-201ENST00000454105 95 ntBASIC-1.21□□□□□ -2.6
CHMP1AQ9HD42 SCARNA18B-201ENST00000458806 135 ntBASIC-1.21□□□□□ -2.6
CHMP1AQ9HD42 MIR8053-201ENST00000613344 75 ntBASIC-1.21□□□□□ -2.6
CHMP1AQ9HD42 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.22□□□□□ -2.6
CHMP1AQ9HD42 SNORD115-33-201ENST00000363723 82 ntBASIC-1.22□□□□□ -2.6
CHMP1AQ9HD42 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.22□□□□□ -2.6
CHMP1AQ9HD42 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.22□□□□□ -2.6
CHMP1AQ9HD42 MIR382-201ENST00000637119 76 ntBASIC-1.22□□□□□ -2.6
CHMP1AQ9HD42 SNORD113.1-201ENST00000363280 73 ntBASIC-1.23□□□□□ -2.61
CHMP1AQ9HD42 RNA5SP368-201ENST00000364298 116 ntBASIC-1.23□□□□□ -2.61
CHMP1AQ9HD42 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.23□□□□□ -2.61
CHMP1AQ9HD42 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.23□□□□□ -2.61
CHMP1AQ9HD42 RNU6-242P-201ENST00000384359 107 ntBASIC-1.23□□□□□ -2.61
CHMP1AQ9HD42 SNORD63.1-201ENST00000516178 80 ntBASIC-1.23□□□□□ -2.61
CHMP1AQ9HD42 U7.5-201ENST00000517224 61 ntBASIC-1.24□□□□□ -2.61
CHMP1AQ9HD42 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.25□□□□□ -2.61
CHMP1AQ9HD42 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.25□□□□□ -2.61
CHMP1AQ9HD42 SNORD95.1-201ENST00000364099 68 ntBASIC-1.25□□□□□ -2.61
CHMP1AQ9HD42 SNORD45A-201ENST00000384512 84 ntBASIC-1.25□□□□□ -2.61
CHMP1AQ9HD42 Z95118.1-201ENST00000421372 247 ntBASIC-1.25□□□□□ -2.61
CHMP1AQ9HD42 MTND4LP1-201ENST00000446263 157 ntBASIC-1.25□□□□□ -2.61
CHMP1AQ9HD42 RNU7-88P-201ENST00000458752 63 ntBASIC-1.25□□□□□ -2.61
CHMP1AQ9HD42 RNU6-587P-201ENST00000391282 106 ntBASIC-1.26□□□□□ -2.61
CHMP1AQ9HD42 RNU4-63P-201ENST00000411313 118 ntBASIC-1.26□□□□□ -2.61
CHMP1AQ9HD42 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.26□□□□□ -2.61
CHMP1AQ9HD42 MIR4666B-201ENST00000578142 81 ntBASIC-1.26□□□□□ -2.61
CHMP1AQ9HD42 RNU6-698P-201ENST00000363523 107 ntBASIC-1.27□□□□□ -2.61
CHMP1AQ9HD42 RNU6-34P-201ENST00000364874 107 ntBASIC-1.27□□□□□ -2.61
CHMP1AQ9HD42 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.27□□□□□ -2.61
CHMP1AQ9HD42 RNU6-732P-201ENST00000516033 103 ntBASIC-1.27□□□□□ -2.61
CHMP1AQ9HD42 U4.4-201ENST00000620626 117 ntBASIC-1.27□□□□□ -2.61
CHMP1AQ9HD42 RNU6-668P-201ENST00000364180 107 ntBASIC-1.29□□□□□ -2.62
CHMP1AQ9HD42 RNU6-787P-201ENST00000384032 107 ntBASIC-1.29□□□□□ -2.62
CHMP1AQ9HD42 RNU6-820P-201ENST00000384273 107 ntBASIC-1.29□□□□□ -2.62
CHMP1AQ9HD42 SNORD83B-201ENST00000386745 93 ntBASIC-1.29□□□□□ -2.62
CHMP1AQ9HD42 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.3□□□□□ -2.62
CHMP1AQ9HD42 RNU6-458P-201ENST00000384179 107 ntBASIC-1.3□□□□□ -2.62
CHMP1AQ9HD42 snoU83B.1-201ENST00000517136 88 ntBASIC-1.3□□□□□ -2.62
CHMP1AQ9HD42 MIR548V-201ENST00000584165 80 ntBASIC-1.3□□□□□ -2.62
CHMP1AQ9HD42 U6.58-201ENST00000613107 107 ntBASIC-1.3□□□□□ -2.62
CHMP1AQ9HD42 RNA5SP215-201ENST00000363440 122 ntBASIC-1.31□□□□□ -2.62
CHMP1AQ9HD42 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.31□□□□□ -2.62
CHMP1AQ9HD42 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.31□□□□□ -2.62
CHMP1AQ9HD42 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.31□□□□□ -2.62
CHMP1AQ9HD42 AC062037.1-201ENST00000605302 128 ntBASIC-1.31□□□□□ -2.62
CHMP1AQ9HD42 AL353691.2-201ENST00000443795 59 ntBASIC-1.32□□□□□ -2.62
CHMP1AQ9HD42 RNU6-70P-201ENST00000516438 60 ntBASIC-1.32□□□□□ -2.62
CHMP1AQ9HD42 MIR3681-201ENST00000580089 72 ntBASIC-1.32□□□□□ -2.62
CHMP1AQ9HD42 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.32□□□□□ -2.62
CHMP1AQ9HD42 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.33□□□□□ -2.62
CHMP1AQ9HD42 MIR527-201ENST00000385244 85 ntBASIC-1.33□□□□□ -2.62
CHMP1AQ9HD42 SNORD19-201ENST00000391191 68 ntBASIC-1.33□□□□□ -2.62
CHMP1AQ9HD42 MIR1265-201ENST00000408444 86 ntBASIC-1.33□□□□□ -2.62
CHMP1AQ9HD42 MIR630-201ENST00000384957 97 ntBASIC-1.34□□□□□ -2.62
CHMP1AQ9HD42 MIR4499-201ENST00000584834 69 ntBASIC-1.34□□□□□ -2.62
CHMP1AQ9HD42 uc_338.19-201ENST00000616808 99 ntBASIC-1.34□□□□□ -2.62
CHMP1AQ9HD42 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.35□□□□□ -2.63
CHMP1AQ9HD42 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.35□□□□□ -2.63
CHMP1AQ9HD42 RNU6-35P-201ENST00000384530 107 ntBASIC-1.36□□□□□ -2.63
CHMP1AQ9HD42 AP002795.1-201ENST00000534879 84 ntBASIC-1.36□□□□□ -2.63
CHMP1AQ9HD42 MIR3134-201ENST00000579433 74 ntBASIC-1.36□□□□□ -2.63
CHMP1AQ9HD42 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.37□□□□□ -2.63
CHMP1AQ9HD42 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.37□□□□□ -2.63
CHMP1AQ9HD42 MIR154-201ENST00000385243 84 ntBASIC-1.37□□□□□ -2.63
CHMP1AQ9HD42 RNA5SP170-201ENST00000517150 101 ntBASIC-1.37□□□□□ -2.63
CHMP1AQ9HD42 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.38□□□□□ -2.63
CHMP1AQ9HD42 RNA5SP25-201ENST00000410815 110 ntBASIC-1.38□□□□□ -2.63
CHMP1AQ9HD42 SNORD116-24-201ENST00000384549 92 ntBASIC-1.39□□□□□ -2.63
CHMP1AQ9HD42 MIR429-201ENST00000362106 83 ntBASIC-1.4□□□□□ -2.63
CHMP1AQ9HD42 SNORD115-31-201ENST00000365318 82 ntBASIC-1.4□□□□□ -2.63
CHMP1AQ9HD42 RNU6-696P-201ENST00000390834 107 ntBASIC-1.4□□□□□ -2.63
CHMP1AQ9HD42 SNORD113-2-201ENST00000391082 72 ntBASIC-1.4□□□□□ -2.63
CHMP1AQ9HD42 MIR5683-201ENST00000636514 76 ntBASIC-1.4□□□□□ -2.63
CHMP1AQ9HD42 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.41□□□□□ -2.64
CHMP1AQ9HD42 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.41□□□□□ -2.64
CHMP1AQ9HD42 RNU6-895P-201ENST00000384125 103 ntBASIC-1.42□□□□□ -2.64
CHMP1AQ9HD42 MIR29B1-201ENST00000385015 81 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 504 ms