Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU6-502P-201ENST00000362419 108 ntBASIC0.4□□□□□ -2.35
LRFN3Q9BTN0 SNORD115-25-201ENST00000362619 82 ntBASIC0.4□□□□□ -2.35
LRFN3Q9BTN0 RNU6-1079P-201ENST00000362861 110 ntBASIC0.4□□□□□ -2.35
LRFN3Q9BTN0 RNU6-815P-201ENST00000384080 113 ntBASIC0.4□□□□□ -2.35
LRFN3Q9BTN0 MIRLET7B-201ENST00000385140 83 ntBASIC0.4□□□□□ -2.35
LRFN3Q9BTN0 AC079150.2-201ENST00000443733 78 ntBASIC0.4□□□□□ -2.35
LRFN3Q9BTN0 RNU6-127P-201ENST00000390897 107 ntBASIC0.39□□□□□ -2.35
LRFN3Q9BTN0 MIR4493-201ENST00000584016 73 ntBASIC0.39□□□□□ -2.35
LRFN3Q9BTN0 MIR106A-201ENST00000384870 81 ntBASIC0.38□□□□□ -2.35
LRFN3Q9BTN0 MTND4LP19-201ENST00000403051 166 ntBASIC0.38□□□□□ -2.35
LRFN3Q9BTN0 RNU6-782P-201ENST00000516852 104 ntBASIC0.38□□□□□ -2.35
LRFN3Q9BTN0 MIR3938-201ENST00000582157 103 ntBASIC0.38□□□□□ -2.35
LRFN3Q9BTN0 Y_RNA.74-201ENST00000362911 99 ntBASIC0.37□□□□□ -2.35
LRFN3Q9BTN0 RNU6-829P-201ENST00000363700 112 ntBASIC0.37□□□□□ -2.35
LRFN3Q9BTN0 SNORA41B-201ENST00000384785 128 ntBASIC0.37□□□□□ -2.35
LRFN3Q9BTN0 MIR1468-201ENST00000410600 86 ntBASIC0.37□□□□□ -2.35
LRFN3Q9BTN0 RNA5SP470-201ENST00000516463 106 ntBASIC0.36□□□□□ -2.35
LRFN3Q9BTN0 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
LRFN3Q9BTN0 AP000676.1-201ENST00000533307 52 ntBASIC0.36□□□□□ -2.35
LRFN3Q9BTN0 AC108676.2-201ENST00000605225 163 ntBASIC0.36□□□□□ -2.35
LRFN3Q9BTN0 MIR604-201ENST00000384880 94 ntBASIC0.35□□□□□ -2.35
LRFN3Q9BTN0 AC104692.1-201ENST00000472406 90 ntBASIC0.35□□□□□ -2.35
LRFN3Q9BTN0 RNU7-154P-201ENST00000516194 62 ntBASIC0.35□□□□□ -2.35
LRFN3Q9BTN0 AC069113.3-201ENST00000521019 150 ntBASIC0.35□□□□□ -2.35
LRFN3Q9BTN0 MIR548AG1-201ENST00000579932 66 ntBASIC0.35□□□□□ -2.35
LRFN3Q9BTN0 RNU6-446P-201ENST00000362827 106 ntBASIC0.34□□□□□ -2.36
LRFN3Q9BTN0 MIR643-201ENST00000385267 97 ntBASIC0.34□□□□□ -2.36
LRFN3Q9BTN0 SNORD95.1-201ENST00000364099 68 ntBASIC0.33□□□□□ -2.36
LRFN3Q9BTN0 Y_RNA.282-201ENST00000364793 102 ntBASIC0.33□□□□□ -2.36
LRFN3Q9BTN0 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
LRFN3Q9BTN0 AP001180.6-201ENST00000584918 159 ntBASIC0.33□□□□□ -2.36
LRFN3Q9BTN0 MIR527-201ENST00000385244 85 ntBASIC0.32□□□□□ -2.36
LRFN3Q9BTN0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.32□□□□□ -2.36
LRFN3Q9BTN0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.32□□□□□ -2.36
LRFN3Q9BTN0 MIR4315-1-201ENST00000636800 73 ntBASIC0.32□□□□□ -2.36
LRFN3Q9BTN0 MIR4315-2-201ENST00000640925 73 ntBASIC0.32□□□□□ -2.36
LRFN3Q9BTN0 Y_RNA.236-201ENST00000364427 111 ntBASIC0.31□□□□□ -2.36
LRFN3Q9BTN0 SNORD115-23-201ENST00000364461 82 ntBASIC0.31□□□□□ -2.36
LRFN3Q9BTN0 SNORD116-16-201ENST00000384533 92 ntBASIC0.31□□□□□ -2.36
LRFN3Q9BTN0 MIR548H2-201ENST00000408874 88 ntBASIC0.31□□□□□ -2.36
LRFN3Q9BTN0 AL353803.5-201ENST00000599815 141 ntBASIC0.31□□□□□ -2.36
LRFN3Q9BTN0 SNORD114-31-201ENST00000363219 75 ntBASIC0.3□□□□□ -2.36
LRFN3Q9BTN0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.3□□□□□ -2.36
LRFN3Q9BTN0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.3□□□□□ -2.36
LRFN3Q9BTN0 MIR6514-201ENST00000622549 70 ntBASIC0.3□□□□□ -2.36
LRFN3Q9BTN0 RNU6-614P-201ENST00000384369 107 ntBASIC0.29□□□□□ -2.36
LRFN3Q9BTN0 U6.59-201ENST00000615686 107 ntBASIC0.29□□□□□ -2.36
LRFN3Q9BTN0 Y_RNA.610-201ENST00000410681 103 ntBASIC0.28□□□□□ -2.36
LRFN3Q9BTN0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.28□□□□□ -2.36
LRFN3Q9BTN0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
LRFN3Q9BTN0 RNU6-987P-201ENST00000384759 104 ntBASIC0.27□□□□□ -2.37
LRFN3Q9BTN0 RNU4-37P-201ENST00000410214 84 ntBASIC0.27□□□□□ -2.37
LRFN3Q9BTN0 RNA5SP163-201ENST00000410304 99 ntBASIC0.27□□□□□ -2.37
LRFN3Q9BTN0 RNU6-180P-201ENST00000516697 61 ntBASIC0.27□□□□□ -2.37
LRFN3Q9BTN0 CR383656.4-201ENST00000546909 122 ntBASIC0.27□□□□□ -2.37
LRFN3Q9BTN0 Y_RNA.109-201ENST00000363215 102 ntBASIC0.26□□□□□ -2.37
LRFN3Q9BTN0 SNORD113-4-201ENST00000364802 75 ntBASIC0.26□□□□□ -2.37
LRFN3Q9BTN0 SNX3P1X-201ENST00000414887 175 ntBASIC0.26□□□□□ -2.37
LRFN3Q9BTN0 RNU7-55P-201ENST00000459426 62 ntBASIC0.26□□□□□ -2.37
LRFN3Q9BTN0 MIR4432-201ENST00000581823 84 ntBASIC0.26□□□□□ -2.37
LRFN3Q9BTN0 RNU6-246P-201ENST00000384702 107 ntBASIC0.25□□□□□ -2.37
LRFN3Q9BTN0 RNU6-520P-201ENST00000384717 104 ntBASIC0.25□□□□□ -2.37
LRFN3Q9BTN0 MIR6507-201ENST00000613630 70 ntBASIC0.25□□□□□ -2.37
LRFN3Q9BTN0 uc_338.36-201ENST00000622331 158 ntBASIC0.25□□□□□ -2.37
LRFN3Q9BTN0 snoR1.1-201ENST00000628177 80 ntBASIC0.25□□□□□ -2.37
LRFN3Q9BTN0 MIR148A-201ENST00000362215 68 ntBASIC0.24□□□□□ -2.37
LRFN3Q9BTN0 RNU6-458P-201ENST00000384179 107 ntBASIC0.24□□□□□ -2.37
LRFN3Q9BTN0 RNU6-900P-201ENST00000384498 102 ntBASIC0.24□□□□□ -2.37
LRFN3Q9BTN0 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
LRFN3Q9BTN0 MIR892B-201ENST00000401279 77 ntBASIC0.24□□□□□ -2.37
LRFN3Q9BTN0 RNU6-231P-201ENST00000517122 103 ntBASIC0.24□□□□□ -2.37
LRFN3Q9BTN0 AC104408.1-201ENST00000605241 170 ntBASIC0.24□□□□□ -2.37
LRFN3Q9BTN0 U6.58-201ENST00000613107 107 ntBASIC0.24□□□□□ -2.37
LRFN3Q9BTN0 RNU6-455P-201ENST00000384681 107 ntBASIC0.23□□□□□ -2.37
LRFN3Q9BTN0 MIR610-201ENST00000385139 96 ntBASIC0.23□□□□□ -2.37
LRFN3Q9BTN0 RNU6-1133P-201ENST00000410963 100 ntBASIC0.23□□□□□ -2.37
LRFN3Q9BTN0 MIR4768-201ENST00000585270 74 ntBASIC0.23□□□□□ -2.37
LRFN3Q9BTN0 AL391099.1-201ENST00000624635 187 ntBASIC0.23□□□□□ -2.37
LRFN3Q9BTN0 RNU7-119P-201ENST00000459279 63 ntBASIC0.22□□□□□ -2.37
LRFN3Q9BTN0 Y_RNA.698-201ENST00000516798 118 ntBASIC0.22□□□□□ -2.37
LRFN3Q9BTN0 MIR429-201ENST00000362106 83 ntBASIC0.21□□□□□ -2.38
LRFN3Q9BTN0 SNORD1B-201ENST00000363091 84 ntBASIC0.21□□□□□ -2.38
LRFN3Q9BTN0 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
LRFN3Q9BTN0 RNU6-973P-201ENST00000364690 107 ntBASIC0.21□□□□□ -2.38
LRFN3Q9BTN0 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
LRFN3Q9BTN0 SNORD57-201ENST00000448188 72 ntBASIC0.21□□□□□ -2.38
LRFN3Q9BTN0 MIR4464-201ENST00000580818 92 ntBASIC0.21□□□□□ -2.38
LRFN3Q9BTN0 MIR4743-201ENST00000584576 69 ntBASIC0.21□□□□□ -2.38
LRFN3Q9BTN0 RNU6-1312P-201ENST00000362425 108 ntBASIC0.2□□□□□ -2.38
LRFN3Q9BTN0 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
LRFN3Q9BTN0 SNORD116.2-201ENST00000391251 93 ntBASIC0.2□□□□□ -2.38
LRFN3Q9BTN0 RNU7-165P-201ENST00000458864 60 ntBASIC0.2□□□□□ -2.38
LRFN3Q9BTN0 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
LRFN3Q9BTN0 MIR7110-201ENST00000612638 86 ntBASIC0.2□□□□□ -2.38
LRFN3Q9BTN0 MIR6888-201ENST00000621977 67 ntBASIC0.2□□□□□ -2.38
LRFN3Q9BTN0 MIR101-1-201ENST00000362265 75 ntBASIC0.19□□□□□ -2.38
LRFN3Q9BTN0 AC096531.1-201ENST00000419107 107 ntBASIC0.19□□□□□ -2.38
LRFN3Q9BTN0 SNORA62.4-201ENST00000365504 151 ntBASIC0.18□□□□□ -2.38
LRFN3Q9BTN0 AC244250.2-201ENST00000418731 148 ntBASIC0.18□□□□□ -2.38
LRFN3Q9BTN0 RNU7-159P-201ENST00000459284 62 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 291.3 ms