Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 RNU6-871P-201ENST00000516122 100 ntBASIC-0.14□□□□□ -2.43
FOXN4Q96NZ1 MIR8068-201ENST00000618032 68 ntBASIC-0.14□□□□□ -2.43
FOXN4Q96NZ1 MIR517B-201ENST00000385102 67 ntBASIC-0.15□□□□□ -2.43
FOXN4Q96NZ1 AC096531.1-201ENST00000419107 107 ntBASIC-0.15□□□□□ -2.43
FOXN4Q96NZ1 AL021921.1-201ENST00000442774 93 ntBASIC-0.15□□□□□ -2.43
FOXN4Q96NZ1 SNORD4A-201ENST00000459174 72 ntBASIC-0.15□□□□□ -2.43
FOXN4Q96NZ1 RNA5SP470-201ENST00000516463 106 ntBASIC-0.15□□□□□ -2.43
FOXN4Q96NZ1 MIR630-201ENST00000384957 97 ntBASIC-0.16□□□□□ -2.44
FOXN4Q96NZ1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
FOXN4Q96NZ1 RNU7-174P-201ENST00000516248 59 ntBASIC-0.16□□□□□ -2.44
FOXN4Q96NZ1 MIR4263-201ENST00000584745 83 ntBASIC-0.16□□□□□ -2.44
FOXN4Q96NZ1 AL590491.3-201ENST00000610731 82 ntBASIC-0.16□□□□□ -2.44
FOXN4Q96NZ1 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.17□□□□□ -2.44
FOXN4Q96NZ1 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.17□□□□□ -2.44
FOXN4Q96NZ1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.17□□□□□ -2.44
FOXN4Q96NZ1 MIR4280-201ENST00000582178 76 ntBASIC-0.17□□□□□ -2.44
FOXN4Q96NZ1 MIR3666-201ENST00000607845 111 ntBASIC-0.17□□□□□ -2.44
FOXN4Q96NZ1 MIR6854-201ENST00000614935 69 ntBASIC-0.17□□□□□ -2.44
FOXN4Q96NZ1 MIR4788-201ENST00000639104 80 ntBASIC-0.17□□□□□ -2.44
FOXN4Q96NZ1 RNA5SP215-201ENST00000363440 122 ntBASIC-0.18□□□□□ -2.44
FOXN4Q96NZ1 RNU6-649P-201ENST00000384463 107 ntBASIC-0.18□□□□□ -2.44
FOXN4Q96NZ1 RNU6-630P-201ENST00000391258 106 ntBASIC-0.18□□□□□ -2.44
FOXN4Q96NZ1 RNU7-154P-201ENST00000516194 62 ntBASIC-0.18□□□□□ -2.44
FOXN4Q96NZ1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.18□□□□□ -2.44
FOXN4Q96NZ1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
FOXN4Q96NZ1 MIR548AG1-201ENST00000579932 66 ntBASIC-0.18□□□□□ -2.44
FOXN4Q96NZ1 MIR4802-201ENST00000581881 80 ntBASIC-0.18□□□□□ -2.44
FOXN4Q96NZ1 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.19□□□□□ -2.44
FOXN4Q96NZ1 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.19□□□□□ -2.44
FOXN4Q96NZ1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.19□□□□□ -2.44
FOXN4Q96NZ1 RNU6-698P-201ENST00000363523 107 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 RNU6-34P-201ENST00000364874 107 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 AC114755.3-201ENST00000481111 251 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 MIR5589-201ENST00000579442 60 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 MIR4464-201ENST00000580818 92 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 MIR4636-201ENST00000582271 80 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 U4.4-201ENST00000620626 117 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 MIR6888-201ENST00000621977 67 ntBASIC-0.2□□□□□ -2.44
FOXN4Q96NZ1 SNORA62.4-201ENST00000365504 151 ntBASIC-0.21□□□□□ -2.44
FOXN4Q96NZ1 AC093726.3-201ENST00000637588 150 ntBASIC-0.21□□□□□ -2.44
FOXN4Q96NZ1 MIR124-2-201ENST00000385081 109 ntBASIC-0.22□□□□□ -2.44
FOXN4Q96NZ1 MIR214-201ENST00000385214 110 ntBASIC-0.22□□□□□ -2.44
FOXN4Q96NZ1 AC108676.2-201ENST00000605225 163 ntBASIC-0.22□□□□□ -2.44
FOXN4Q96NZ1 MIR6851-201ENST00000617060 67 ntBASIC-0.22□□□□□ -2.44
FOXN4Q96NZ1 U6.111-201ENST00000636093 83 ntBASIC-0.22□□□□□ -2.44
FOXN4Q96NZ1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.23□□□□□ -2.45
FOXN4Q96NZ1 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.23□□□□□ -2.45
FOXN4Q96NZ1 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.23□□□□□ -2.45
FOXN4Q96NZ1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.23□□□□□ -2.45
FOXN4Q96NZ1 AC005520.4-201ENST00000604337 90 ntBASIC-0.23□□□□□ -2.45
FOXN4Q96NZ1 MIR8064-201ENST00000612863 90 ntBASIC-0.23□□□□□ -2.45
FOXN4Q96NZ1 AL445584.3-201ENST00000617173 78 ntBASIC-0.23□□□□□ -2.45
FOXN4Q96NZ1 SNORA25.4-201ENST00000363666 124 ntBASIC-0.24□□□□□ -2.45
FOXN4Q96NZ1 MIR204-201ENST00000385200 110 ntBASIC-0.24□□□□□ -2.45
FOXN4Q96NZ1 MIR527-201ENST00000385244 85 ntBASIC-0.24□□□□□ -2.45
FOXN4Q96NZ1 SNORD113-2-201ENST00000391082 72 ntBASIC-0.24□□□□□ -2.45
FOXN4Q96NZ1 RNU6-542P-201ENST00000516405 103 ntBASIC-0.24□□□□□ -2.45
FOXN4Q96NZ1 RNU6-539P-201ENST00000516665 103 ntBASIC-0.24□□□□□ -2.45
FOXN4Q96NZ1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.24□□□□□ -2.45
FOXN4Q96NZ1 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.25□□□□□ -2.45
FOXN4Q96NZ1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.25□□□□□ -2.45
FOXN4Q96NZ1 AC114801.3-201ENST00000510231 177 ntBASIC-0.25□□□□□ -2.45
FOXN4Q96NZ1 RNU6-800P-201ENST00000384473 103 ntBASIC-0.26□□□□□ -2.45
FOXN4Q96NZ1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
FOXN4Q96NZ1 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.27□□□□□ -2.45
FOXN4Q96NZ1 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.27□□□□□ -2.45
FOXN4Q96NZ1 SNORD22.1-201ENST00000516331 125 ntBASIC-0.27□□□□□ -2.45
FOXN4Q96NZ1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.27□□□□□ -2.45
FOXN4Q96NZ1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.28□□□□□ -2.45
FOXN4Q96NZ1 RNU6-246P-201ENST00000384702 107 ntBASIC-0.28□□□□□ -2.45
FOXN4Q96NZ1 MIR518B-201ENST00000385127 83 ntBASIC-0.28□□□□□ -2.45
FOXN4Q96NZ1 SNORD18.2-201ENST00000459604 70 ntBASIC-0.28□□□□□ -2.45
FOXN4Q96NZ1 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.28□□□□□ -2.45
FOXN4Q96NZ1 RNA5SP476-201ENST00000516613 103 ntBASIC-0.28□□□□□ -2.45
FOXN4Q96NZ1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.28□□□□□ -2.45
FOXN4Q96NZ1 RNU6-458P-201ENST00000384179 107 ntBASIC-0.29□□□□□ -2.46
FOXN4Q96NZ1 SNORA41B-201ENST00000384785 128 ntBASIC-0.29□□□□□ -2.46
FOXN4Q96NZ1 RNU7-88P-201ENST00000458752 63 ntBASIC-0.29□□□□□ -2.46
FOXN4Q96NZ1 U6.58-201ENST00000613107 107 ntBASIC-0.29□□□□□ -2.46
FOXN4Q96NZ1 RNU6-924P-201ENST00000362926 108 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 MIR1265-201ENST00000408444 86 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 U7.5-201ENST00000517224 61 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 MIR3179-1-201ENST00000578940 84 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 MIR3179-2-201ENST00000579107 84 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 MIR3179-3-201ENST00000579566 84 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 MIR4645-201ENST00000583158 77 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 AP001180.6-201ENST00000584918 159 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 MIR3179-4-201ENST00000617599 84 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 MIR6086-201ENST00000638065 55 ntBASIC-0.3□□□□□ -2.46
FOXN4Q96NZ1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.31□□□□□ -2.46
FOXN4Q96NZ1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.31□□□□□ -2.46
FOXN4Q96NZ1 RNU6-92P-201ENST00000605893 104 ntBASIC-0.31□□□□□ -2.46
FOXN4Q96NZ1 SNORD74.6-201ENST00000364796 70 ntBASIC-0.32□□□□□ -2.46
FOXN4Q96NZ1 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.32□□□□□ -2.46
FOXN4Q96NZ1 MIR196A2-201ENST00000385189 110 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms