Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 MIR3938-201ENST00000582157 103 ntBASIC0.41□□□□□ -2.34
DDX54Q8TDD1 AL353803.5-201ENST00000599815 141 ntBASIC0.41□□□□□ -2.34
DDX54Q8TDD1 MIR6759-201ENST00000638110 65 ntBASIC0.41□□□□□ -2.34
DDX54Q8TDD1 RNU6-446P-201ENST00000362827 106 ntBASIC0.4□□□□□ -2.35
DDX54Q8TDD1 MIR6718-201ENST00000616153 80 ntBASIC0.4□□□□□ -2.35
DDX54Q8TDD1 AL627230.5-201ENST00000619807 58 ntBASIC0.4□□□□□ -2.35
DDX54Q8TDD1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.39□□□□□ -2.35
DDX54Q8TDD1 MIR329-2-201ENST00000385029 84 ntBASIC0.39□□□□□ -2.35
DDX54Q8TDD1 RNU7-154P-201ENST00000516194 62 ntBASIC0.39□□□□□ -2.35
DDX54Q8TDD1 RNA5SP470-201ENST00000516463 106 ntBASIC0.39□□□□□ -2.35
DDX54Q8TDD1 MIR4636-201ENST00000582271 80 ntBASIC0.39□□□□□ -2.35
DDX54Q8TDD1 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
DDX54Q8TDD1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.38□□□□□ -2.35
DDX54Q8TDD1 SNORD115-23-201ENST00000364461 82 ntBASIC0.37□□□□□ -2.35
DDX54Q8TDD1 AC104408.1-201ENST00000605241 170 ntBASIC0.37□□□□□ -2.35
DDX54Q8TDD1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.37□□□□□ -2.35
DDX54Q8TDD1 SNORD116-16-201ENST00000384533 92 ntBASIC0.35□□□□□ -2.35
DDX54Q8TDD1 MIR6507-201ENST00000613630 70 ntBASIC0.35□□□□□ -2.35
DDX54Q8TDD1 snoR1.1-201ENST00000628177 80 ntBASIC0.35□□□□□ -2.35
DDX54Q8TDD1 Y_RNA.109-201ENST00000363215 102 ntBASIC0.34□□□□□ -2.36
DDX54Q8TDD1 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
DDX54Q8TDD1 RNU6-180P-201ENST00000516697 61 ntBASIC0.34□□□□□ -2.36
DDX54Q8TDD1 RNU6-455P-201ENST00000384681 107 ntBASIC0.33□□□□□ -2.36
DDX54Q8TDD1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.33□□□□□ -2.36
DDX54Q8TDD1 CR383656.4-201ENST00000546909 122 ntBASIC0.33□□□□□ -2.36
DDX54Q8TDD1 MIR4432-201ENST00000581823 84 ntBASIC0.33□□□□□ -2.36
DDX54Q8TDD1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.33□□□□□ -2.36
DDX54Q8TDD1 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
DDX54Q8TDD1 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
DDX54Q8TDD1 RNA5SP214-201ENST00000363378 118 ntBASIC0.32□□□□□ -2.36
DDX54Q8TDD1 MIR145-201ENST00000384967 88 ntBASIC0.32□□□□□ -2.36
DDX54Q8TDD1 MIR5589-201ENST00000579442 60 ntBASIC0.32□□□□□ -2.36
DDX54Q8TDD1 SNORD114-5-201ENST00000362928 70 ntBASIC0.31□□□□□ -2.36
DDX54Q8TDD1 Y_RNA.236-201ENST00000364427 111 ntBASIC0.31□□□□□ -2.36
DDX54Q8TDD1 MIR610-201ENST00000385139 96 ntBASIC0.31□□□□□ -2.36
DDX54Q8TDD1 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.31□□□□□ -2.36
DDX54Q8TDD1 AL391099.1-201ENST00000624635 187 ntBASIC0.31□□□□□ -2.36
DDX54Q8TDD1 SNORD113-4-201ENST00000364802 75 ntBASIC0.3□□□□□ -2.36
DDX54Q8TDD1 RNU6-458P-201ENST00000384179 107 ntBASIC0.3□□□□□ -2.36
DDX54Q8TDD1 RNU6-1133P-201ENST00000410963 100 ntBASIC0.3□□□□□ -2.36
DDX54Q8TDD1 RNU7-55P-201ENST00000459426 62 ntBASIC0.3□□□□□ -2.36
DDX54Q8TDD1 MIR5704-201ENST00000584029 77 ntBASIC0.3□□□□□ -2.36
DDX54Q8TDD1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.3□□□□□ -2.36
DDX54Q8TDD1 U6.58-201ENST00000613107 107 ntBASIC0.3□□□□□ -2.36
DDX54Q8TDD1 MIR4802-201ENST00000581881 80 ntBASIC0.29□□□□□ -2.36
DDX54Q8TDD1 Y_RNA.698-201ENST00000516798 118 ntBASIC0.28□□□□□ -2.36
DDX54Q8TDD1 RNU6-614P-201ENST00000384369 107 ntBASIC0.27□□□□□ -2.37
DDX54Q8TDD1 RNU6-900P-201ENST00000384498 102 ntBASIC0.27□□□□□ -2.37
DDX54Q8TDD1 RNU6-231P-201ENST00000517122 103 ntBASIC0.27□□□□□ -2.37
DDX54Q8TDD1 MIR4464-201ENST00000580818 92 ntBASIC0.27□□□□□ -2.37
DDX54Q8TDD1 AC108676.2-201ENST00000605225 163 ntBASIC0.27□□□□□ -2.37
DDX54Q8TDD1 U6.59-201ENST00000615686 107 ntBASIC0.27□□□□□ -2.37
DDX54Q8TDD1 MIR6888-201ENST00000621977 67 ntBASIC0.27□□□□□ -2.37
DDX54Q8TDD1 SNORD114-9-201ENST00000364370 72 ntBASIC0.26□□□□□ -2.37
DDX54Q8TDD1 RNU6-246P-201ENST00000384702 107 ntBASIC0.26□□□□□ -2.37
DDX54Q8TDD1 MIR5190-201ENST00000581537 80 ntBASIC0.26□□□□□ -2.37
DDX54Q8TDD1 MIR8068-201ENST00000618032 68 ntBASIC0.26□□□□□ -2.37
DDX54Q8TDD1 RNU6-1312P-201ENST00000362425 108 ntBASIC0.25□□□□□ -2.37
DDX54Q8TDD1 SNORD1B-201ENST00000363091 84 ntBASIC0.25□□□□□ -2.37
DDX54Q8TDD1 RNU6-973P-201ENST00000364690 107 ntBASIC0.25□□□□□ -2.37
DDX54Q8TDD1 SNORD116.2-201ENST00000391251 93 ntBASIC0.25□□□□□ -2.37
DDX54Q8TDD1 MIR892B-201ENST00000401279 77 ntBASIC0.25□□□□□ -2.37
DDX54Q8TDD1 AC244250.2-201ENST00000418731 148 ntBASIC0.25□□□□□ -2.37
DDX54Q8TDD1 MIR148A-201ENST00000362215 68 ntBASIC0.24□□□□□ -2.37
DDX54Q8TDD1 RNU7-165P-201ENST00000458864 60 ntBASIC0.24□□□□□ -2.37
DDX54Q8TDD1 RNU7-159P-201ENST00000459284 62 ntBASIC0.24□□□□□ -2.37
DDX54Q8TDD1 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
DDX54Q8TDD1 snoU13.19-201ENST00000459148 104 ntBASIC0.23□□□□□ -2.37
DDX54Q8TDD1 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
DDX54Q8TDD1 RNU6-929P-201ENST00000384429 107 ntBASIC0.22□□□□□ -2.37
DDX54Q8TDD1 RNU6-172P-201ENST00000411000 93 ntBASIC0.22□□□□□ -2.37
DDX54Q8TDD1 RNU6-598P-201ENST00000364017 105 ntBASIC0.21□□□□□ -2.38
DDX54Q8TDD1 SNORD56B-201ENST00000384713 71 ntBASIC0.21□□□□□ -2.38
DDX54Q8TDD1 AC096531.1-201ENST00000419107 107 ntBASIC0.21□□□□□ -2.38
DDX54Q8TDD1 RNU7-88P-201ENST00000458752 63 ntBASIC0.21□□□□□ -2.38
DDX54Q8TDD1 U2.18-201ENST00000622185 84 ntBASIC0.21□□□□□ -2.38
DDX54Q8TDD1 AL445584.3-201ENST00000617173 78 ntBASIC0.2□□□□□ -2.38
DDX54Q8TDD1 RNU6-987P-201ENST00000384759 104 ntBASIC0.19□□□□□ -2.38
DDX54Q8TDD1 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
DDX54Q8TDD1 RNA5SP25-201ENST00000410815 110 ntBASIC0.19□□□□□ -2.38
DDX54Q8TDD1 Z95118.1-201ENST00000421372 247 ntBASIC0.19□□□□□ -2.38
DDX54Q8TDD1 AL445193.1-201ENST00000441183 141 ntBASIC0.19□□□□□ -2.38
DDX54Q8TDD1 MIR7110-201ENST00000612638 86 ntBASIC0.19□□□□□ -2.38
DDX54Q8TDD1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.18□□□□□ -2.38
DDX54Q8TDD1 RNU6-901P-201ENST00000384593 106 ntBASIC0.18□□□□□ -2.38
DDX54Q8TDD1 RNU4-37P-201ENST00000410214 84 ntBASIC0.18□□□□□ -2.38
DDX54Q8TDD1 MIR4743-201ENST00000584576 69 ntBASIC0.18□□□□□ -2.38
DDX54Q8TDD1 MIR4768-201ENST00000585270 74 ntBASIC0.18□□□□□ -2.38
DDX54Q8TDD1 MIR429-201ENST00000362106 83 ntBASIC0.17□□□□□ -2.38
DDX54Q8TDD1 MIR655-201ENST00000362159 97 ntBASIC0.17□□□□□ -2.38
DDX54Q8TDD1 MIR579-201ENST00000385221 98 ntBASIC0.17□□□□□ -2.38
DDX54Q8TDD1 U7.5-201ENST00000517224 61 ntBASIC0.17□□□□□ -2.38
DDX54Q8TDD1 MIR7978-201ENST00000636158 59 ntBASIC0.17□□□□□ -2.38
DDX54Q8TDD1 RNU6-810P-201ENST00000364001 107 ntBASIC0.16□□□□□ -2.38
DDX54Q8TDD1 RNU6-520P-201ENST00000384717 104 ntBASIC0.16□□□□□ -2.38
DDX54Q8TDD1 RNU7-119P-201ENST00000459279 63 ntBASIC0.16□□□□□ -2.38
DDX54Q8TDD1 SNORA62.4-201ENST00000365504 151 ntBASIC0.15□□□□□ -2.39
DDX54Q8TDD1 RNU6-30P-201ENST00000384561 107 ntBASIC0.15□□□□□ -2.39
DDX54Q8TDD1 SNORA40.16-201ENST00000517238 121 ntBASIC0.15□□□□□ -2.39
DDX54Q8TDD1 MIR6854-201ENST00000614935 69 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms