Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-320P-201ENST00000516511 106 ntBASIC-0.48□□□□□ -2.49
CLRN3Q8NCR9 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
CLRN3Q8NCR9 RNA5SP215-201ENST00000363440 122 ntBASIC-0.49□□□□□ -2.49
CLRN3Q8NCR9 MIR519A2-201ENST00000384990 87 ntBASIC-0.49□□□□□ -2.49
CLRN3Q8NCR9 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.49□□□□□ -2.49
CLRN3Q8NCR9 MIR5704-201ENST00000584029 77 ntBASIC-0.49□□□□□ -2.49
CLRN3Q8NCR9 MIR4662A-201ENST00000637499 67 ntBASIC-0.49□□□□□ -2.49
CLRN3Q8NCR9 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.5□□□□□ -2.49
CLRN3Q8NCR9 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.5□□□□□ -2.49
CLRN3Q8NCR9 SNORA13-201ENST00000458790 133 ntBASIC-0.5□□□□□ -2.49
CLRN3Q8NCR9 RNU6-871P-201ENST00000516122 100 ntBASIC-0.51□□□□□ -2.49
CLRN3Q8NCR9 SNORD114-11-201ENST00000363738 75 ntBASIC-0.52□□□□□ -2.49
CLRN3Q8NCR9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.52□□□□□ -2.49
CLRN3Q8NCR9 SNORD14C-201ENST00000365382 88 ntBASIC-0.52□□□□□ -2.49
CLRN3Q8NCR9 MIR517B-201ENST00000385102 67 ntBASIC-0.52□□□□□ -2.49
CLRN3Q8NCR9 MIR204-201ENST00000385200 110 ntBASIC-0.52□□□□□ -2.49
CLRN3Q8NCR9 SNORD115-31-201ENST00000365318 82 ntBASIC-0.53□□□□□ -2.49
CLRN3Q8NCR9 RNU6-634P-201ENST00000459134 106 ntBASIC-0.53□□□□□ -2.49
CLRN3Q8NCR9 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.54□□□□□ -2.5
CLRN3Q8NCR9 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
CLRN3Q8NCR9 RNU7-174P-201ENST00000516248 59 ntBASIC-0.54□□□□□ -2.5
CLRN3Q8NCR9 SNORD38.3-201ENST00000516599 73 ntBASIC-0.54□□□□□ -2.5
CLRN3Q8NCR9 AP001180.6-201ENST00000584918 159 ntBASIC-0.54□□□□□ -2.5
CLRN3Q8NCR9 MIR5589-201ENST00000579442 60 ntBASIC-0.55□□□□□ -2.5
CLRN3Q8NCR9 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.56□□□□□ -2.5
CLRN3Q8NCR9 RNU6-698P-201ENST00000363523 107 ntBASIC-0.56□□□□□ -2.5
CLRN3Q8NCR9 SNORD74.6-201ENST00000364796 70 ntBASIC-0.56□□□□□ -2.5
CLRN3Q8NCR9 RNU6-34P-201ENST00000364874 107 ntBASIC-0.56□□□□□ -2.5
CLRN3Q8NCR9 MIR518B-201ENST00000385127 83 ntBASIC-0.56□□□□□ -2.5
CLRN3Q8NCR9 SNORD126-201ENST00000459475 77 ntBASIC-0.57□□□□□ -2.5
CLRN3Q8NCR9 MIR8068-201ENST00000618032 68 ntBASIC-0.57□□□□□ -2.5
CLRN3Q8NCR9 RNU6-776P-201ENST00000364403 104 ntBASIC-0.58□□□□□ -2.5
CLRN3Q8NCR9 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.58□□□□□ -2.5
CLRN3Q8NCR9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
CLRN3Q8NCR9 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.59□□□□□ -2.5
CLRN3Q8NCR9 MIR889-201ENST00000401280 79 ntBASIC-0.59□□□□□ -2.5
CLRN3Q8NCR9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
CLRN3Q8NCR9 AC108676.2-201ENST00000605225 163 ntBASIC-0.59□□□□□ -2.5
CLRN3Q8NCR9 SNORD116-24-201ENST00000384549 92 ntBASIC-0.6□□□□□ -2.51
CLRN3Q8NCR9 AL445584.3-201ENST00000617173 78 ntBASIC-0.6□□□□□ -2.51
CLRN3Q8NCR9 MIR101-1-201ENST00000362265 75 ntBASIC-0.61□□□□□ -2.51
CLRN3Q8NCR9 AC021146.6-201ENST00000514659 117 ntBASIC-0.61□□□□□ -2.51
CLRN3Q8NCR9 MIR4464-201ENST00000580818 92 ntBASIC-0.61□□□□□ -2.51
CLRN3Q8NCR9 MIR4802-201ENST00000581881 80 ntBASIC-0.61□□□□□ -2.51
CLRN3Q8NCR9 MIR4493-201ENST00000584016 73 ntBASIC-0.61□□□□□ -2.51
CLRN3Q8NCR9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.61□□□□□ -2.51
CLRN3Q8NCR9 SNORD113-2-201ENST00000391082 72 ntBASIC-0.62□□□□□ -2.51
CLRN3Q8NCR9 RNU6-663P-201ENST00000391105 106 ntBASIC-0.62□□□□□ -2.51
CLRN3Q8NCR9 RNU6-523P-201ENST00000516304 54 ntBASIC-0.62□□□□□ -2.51
CLRN3Q8NCR9 MIR548V-201ENST00000584165 80 ntBASIC-0.62□□□□□ -2.51
CLRN3Q8NCR9 MIR6888-201ENST00000621977 67 ntBASIC-0.62□□□□□ -2.51
CLRN3Q8NCR9 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.63□□□□□ -2.51
CLRN3Q8NCR9 RNU6-924P-201ENST00000362926 108 ntBASIC-0.63□□□□□ -2.51
CLRN3Q8NCR9 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.63□□□□□ -2.51
CLRN3Q8NCR9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.63□□□□□ -2.51
CLRN3Q8NCR9 MIR4636-201ENST00000582271 80 ntBASIC-0.64□□□□□ -2.51
CLRN3Q8NCR9 MIR429-201ENST00000362106 83 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 RNU6-540P-201ENST00000384622 101 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 Z95118.1-201ENST00000421372 247 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 SNORD22.1-201ENST00000516331 125 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 RNA5SP169-201ENST00000517268 117 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 MIR3179-1-201ENST00000578940 84 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 MIR3179-2-201ENST00000579107 84 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 MIR3179-3-201ENST00000579566 84 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 MIR3179-4-201ENST00000617599 84 ntBASIC-0.65□□□□□ -2.51
CLRN3Q8NCR9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.66□□□□□ -2.52
CLRN3Q8NCR9 MIR604-201ENST00000384880 94 ntBASIC-0.66□□□□□ -2.52
CLRN3Q8NCR9 MIR124-2-201ENST00000385081 109 ntBASIC-0.66□□□□□ -2.52
CLRN3Q8NCR9 RNU6-542P-201ENST00000516405 103 ntBASIC-0.66□□□□□ -2.52
CLRN3Q8NCR9 MIR196A2-201ENST00000385189 110 ntBASIC-0.67□□□□□ -2.52
CLRN3Q8NCR9 SNORD30.1-201ENST00000391309 70 ntBASIC-0.67□□□□□ -2.52
CLRN3Q8NCR9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.67□□□□□ -2.52
CLRN3Q8NCR9 RNU6-638P-201ENST00000516582 104 ntBASIC-0.67□□□□□ -2.52
CLRN3Q8NCR9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.68□□□□□ -2.52
CLRN3Q8NCR9 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.68□□□□□ -2.52
CLRN3Q8NCR9 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.68□□□□□ -2.52
CLRN3Q8NCR9 MIR630-201ENST00000384957 97 ntBASIC-0.68□□□□□ -2.52
CLRN3Q8NCR9 SNORD18.2-201ENST00000459604 70 ntBASIC-0.68□□□□□ -2.52
CLRN3Q8NCR9 RNU6-758P-201ENST00000516292 89 ntBASIC-0.68□□□□□ -2.52
CLRN3Q8NCR9 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.68□□□□□ -2.52
CLRN3Q8NCR9 U4.4-201ENST00000620626 117 ntBASIC-0.68□□□□□ -2.52
CLRN3Q8NCR9 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.69□□□□□ -2.52
CLRN3Q8NCR9 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.69□□□□□ -2.52
CLRN3Q8NCR9 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.7□□□□□ -2.52
CLRN3Q8NCR9 RNU6-649P-201ENST00000384463 107 ntBASIC-0.7□□□□□ -2.52
CLRN3Q8NCR9 MIR527-201ENST00000385244 85 ntBASIC-0.7□□□□□ -2.52
CLRN3Q8NCR9 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.71□□□□□ -2.52
CLRN3Q8NCR9 MIR224-201ENST00000384889 81 ntBASIC-0.71□□□□□ -2.52
CLRN3Q8NCR9 RNU6-539P-201ENST00000516665 103 ntBASIC-0.71□□□□□ -2.52
CLRN3Q8NCR9 SNORA25.4-201ENST00000363666 124 ntBASIC-0.72□□□□□ -2.52
CLRN3Q8NCR9 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.72□□□□□ -2.52
CLRN3Q8NCR9 RNU6-630P-201ENST00000391258 106 ntBASIC-0.72□□□□□ -2.52
CLRN3Q8NCR9 SNORA3B-201ENST00000391305 131 ntBASIC-0.72□□□□□ -2.52
CLRN3Q8NCR9 MIR1265-201ENST00000408444 86 ntBASIC-0.72□□□□□ -2.52
CLRN3Q8NCR9 RPS29P8-201ENST00000445109 171 ntBASIC-0.72□□□□□ -2.52
CLRN3Q8NCR9 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.73□□□□□ -2.53
CLRN3Q8NCR9 RNU6-35P-201ENST00000384530 107 ntBASIC-0.73□□□□□ -2.53
CLRN3Q8NCR9 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms