Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-4.38□□□□□ -3.11
VPS13CQ709C8 RNU6-326P-201ENST00000365480 107 ntBASIC-4.39□□□□□ -3.11
VPS13CQ709C8 SNORA75.5-201ENST00000391291 81 ntBASIC-4.39□□□□□ -3.11
VPS13CQ709C8 RNU6-876P-201ENST00000391295 104 ntBASIC-4.4□□□□□ -3.11
VPS13CQ709C8 MIR548P-201ENST00000408336 84 ntBASIC-4.4□□□□□ -3.11
VPS13CQ709C8 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-4.4□□□□□ -3.11
VPS13CQ709C8 Y_RNA.194-201ENST00000363985 102 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 SNORD81.2-201ENST00000365153 76 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 RNU6-411P-201ENST00000384451 107 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 Y_RNA.314-201ENST00000365114 102 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 SNORD116.1-201ENST00000365628 92 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 Y_RNA.445-201ENST00000384168 102 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 AC130289.1-201ENST00000577321 73 ntBASIC-4.41□□□□□ -3.12
VPS13CQ709C8 RNU6-806P-201ENST00000365147 105 ntBASIC-4.42□□□□□ -3.12
VPS13CQ709C8 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.43□□□□□ -3.12
VPS13CQ709C8 Y_RNA.44-201ENST00000362676 108 ntBASIC-4.43□□□□□ -3.12
VPS13CQ709C8 Y_RNA.485-201ENST00000384395 102 ntBASIC-4.43□□□□□ -3.12
VPS13CQ709C8 MTND2P30-201ENST00000456663 382 ntBASIC-4.43□□□□□ -3.12
VPS13CQ709C8 Y_RNA.686-201ENST00000516548 134 ntBASIC-4.43□□□□□ -3.12
VPS13CQ709C8 Y_RNA.41-201ENST00000362646 102 ntBASIC-4.44□□□□□ -3.12
VPS13CQ709C8 Y_RNA.581-201ENST00000391017 97 ntBASIC-4.44□□□□□ -3.12
VPS13CQ709C8 RNU6-1289P-201ENST00000384431 106 ntBASIC-4.44□□□□□ -3.12
VPS13CQ709C8 MIR1263-201ENST00000408324 86 ntBASIC-4.44□□□□□ -3.12
VPS13CQ709C8 RNU6-986P-201ENST00000363133 102 ntBASIC-4.44□□□□□ -3.12
VPS13CQ709C8 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.44□□□□□ -3.12
VPS13CQ709C8 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.45□□□□□ -3.12
VPS13CQ709C8 AC099799.1-201ENST00000439809 192 ntBASIC-4.45□□□□□ -3.12
VPS13CQ709C8 MTND5P5-201ENST00000503764 376 ntBASIC-4.45□□□□□ -3.12
VPS13CQ709C8 RNU7-61P-201ENST00000515897 61 ntBASIC-4.45□□□□□ -3.12
VPS13CQ709C8 SNORA25.5-201ENST00000363782 126 ntBASIC-4.45□□□□□ -3.12
VPS13CQ709C8 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.46□□□□□ -3.12
VPS13CQ709C8 SNORD58.1-201ENST00000391313 66 ntBASIC-4.46□□□□□ -3.12
VPS13CQ709C8 RNU6-887P-201ENST00000410660 100 ntBASIC-4.46□□□□□ -3.12
VPS13CQ709C8 AC096644.2-201ENST00000429278 159 ntBASIC-4.46□□□□□ -3.12
VPS13CQ709C8 Y_RNA.615-201ENST00000410769 117 ntBASIC-4.46□□□□□ -3.12
VPS13CQ709C8 RNU6-130P-201ENST00000411112 103 ntBASIC-4.46□□□□□ -3.12
VPS13CQ709C8 AC138305.3-201ENST00000624988 240 ntBASIC-4.46□□□□□ -3.12
VPS13CQ709C8 MIR154-201ENST00000385243 84 ntBASIC-4.47□□□□□ -3.12
VPS13CQ709C8 SNORD116-24-201ENST00000384549 92 ntBASIC-4.47□□□□□ -3.13
VPS13CQ709C8 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-4.47□□□□□ -3.13
VPS13CQ709C8 RNU6-1015P-201ENST00000517121 99 ntBASIC-4.47□□□□□ -3.13
VPS13CQ709C8 RPS29P30-201ENST00000600975 111 ntBASIC-4.47□□□□□ -3.13
VPS13CQ709C8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-4.48□□□□□ -3.13
VPS13CQ709C8 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.49□□□□□ -3.13
VPS13CQ709C8 MTND3P10-201ENST00000450967 341 ntBASIC-4.49□□□□□ -3.13
VPS13CQ709C8 Y_RNA.337-201ENST00000365312 102 ntBASIC-4.49□□□□□ -3.13
VPS13CQ709C8 RNU6-500P-201ENST00000362349 107 ntBASIC-4.5□□□□□ -3.13
VPS13CQ709C8 RNU6-808P-201ENST00000391233 108 ntBASIC-4.5□□□□□ -3.13
VPS13CQ709C8 RNU6-380P-201ENST00000410207 107 ntBASIC-4.5□□□□□ -3.13
VPS13CQ709C8 SNORD116-6-201ENST00000384711 96 ntBASIC-4.51□□□□□ -3.13
VPS13CQ709C8 RNU6-510P-201ENST00000391239 108 ntBASIC-4.51□□□□□ -3.13
VPS13CQ709C8 MIR548F5-201ENST00000408421 86 ntBASIC-4.51□□□□□ -3.13
VPS13CQ709C8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-4.51□□□□□ -3.13
VPS13CQ709C8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-4.51□□□□□ -3.13
VPS13CQ709C8 RNU6-770P-201ENST00000363929 105 ntBASIC-4.52□□□□□ -3.13
VPS13CQ709C8 Y_RNA.262-201ENST00000364641 102 ntBASIC-4.52□□□□□ -3.13
VPS13CQ709C8 RNU6-290P-201ENST00000365212 101 ntBASIC-4.52□□□□□ -3.13
VPS13CQ709C8 Z69908.1-201ENST00000622603 247 ntBASIC-4.53□□□□□ -3.13
VPS13CQ709C8 RNU6-122P-201ENST00000516818 107 ntBASIC-4.53□□□□□ -3.13
VPS13CQ709C8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-4.53□□□□□ -3.14
VPS13CQ709C8 MIR664A-201ENST00000626086 82 ntBASIC-4.53□□□□□ -3.14
VPS13CQ709C8 RNU6-795P-201ENST00000516323 103 ntBASIC-4.54□□□□□ -3.14
VPS13CQ709C8 AC015540.1-201ENST00000615828 501 ntBASIC-4.54□□□□□ -3.14
VPS13CQ709C8 RNU6-70P-201ENST00000516438 60 ntBASIC-4.55□□□□□ -3.14
VPS13CQ709C8 MIR4272-201ENST00000635924 64 ntBASIC-4.55□□□□□ -3.14
VPS13CQ709C8 RNU6-895P-201ENST00000384125 103 ntBASIC-4.56□□□□□ -3.14
VPS13CQ709C8 SNORD37.2-201ENST00000391075 66 ntBASIC-4.56□□□□□ -3.14
VPS13CQ709C8 AL445567.1-201ENST00000439121 144 ntBASIC-4.57□□□□□ -3.14
VPS13CQ709C8 NBR2-204ENST00000587322 63 ntBASIC-4.57□□□□□ -3.14
VPS13CQ709C8 Y_RNA.154-201ENST00000363624 102 ntBASIC-4.57□□□□□ -3.14
VPS13CQ709C8 AL035470.1-201ENST00000622571 220 ntBASIC-4.57□□□□□ -3.14
VPS13CQ709C8 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.58□□□□□ -3.14
VPS13CQ709C8 Y_RNA.339-201ENST00000365325 102 ntBASIC-4.58□□□□□ -3.14
VPS13CQ709C8 MTATP8P2-201ENST00000435212 202 ntBASIC-4.58□□□□□ -3.14
VPS13CQ709C8 RNU4-33P-201ENST00000364316 85 ntBASIC-4.59□□□□□ -3.14
VPS13CQ709C8 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.59□□□□□ -3.14
VPS13CQ709C8 RNU6-659P-201ENST00000516454 104 ntBASIC-4.59□□□□□ -3.14
VPS13CQ709C8 Y_RNA.201-201ENST00000364052 96 ntBASIC-4.61□□□□□ -3.15
VPS13CQ709C8 Y_RNA.387-201ENST00000383918 102 ntBASIC-4.61□□□□□ -3.15
VPS13CQ709C8 AL160413.1-201ENST00000622780 310 ntBASIC-4.61□□□□□ -3.15
VPS13CQ709C8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-4.61□□□□□ -3.15
VPS13CQ709C8 MIR4668-201ENST00000582284 70 ntBASIC-4.61□□□□□ -3.15
VPS13CQ709C8 Y_RNA.599-201ENST00000410489 109 ntBASIC-4.62□□□□□ -3.15
VPS13CQ709C8 RNU6-633P-201ENST00000362612 103 ntBASIC-4.63□□□□□ -3.15
VPS13CQ709C8 MIR1302-6-201ENST00000408466 90 ntBASIC-4.63□□□□□ -3.15
VPS13CQ709C8 Y_RNA.84-201ENST00000363011 104 ntBASIC-4.63□□□□□ -3.15
VPS13CQ709C8 AC078883.4-201ENST00000623218 367 ntBASIC-4.63□□□□□ -3.15
VPS13CQ709C8 RNU6-275P-201ENST00000364910 107 ntBASIC-4.64□□□□□ -3.15
VPS13CQ709C8 RNU7-121P-201ENST00000516604 62 ntBASIC-4.64□□□□□ -3.15
VPS13CQ709C8 RNU6-1314P-201ENST00000517139 104 ntBASIC-4.64□□□□□ -3.15
VPS13CQ709C8 RNU6-892P-201ENST00000410335 99 ntBASIC-4.65□□□□□ -3.15
VPS13CQ709C8 SNORA63.7-201ENST00000365579 123 ntBASIC-4.65□□□□□ -3.15
VPS13CQ709C8 AC104985.2-201ENST00000620598 500 ntBASIC-4.65□□□□□ -3.15
VPS13CQ709C8 AL162413.1-201ENST00000603198 110 ntBASIC-4.66□□□□□ -3.16
VPS13CQ709C8 Y_RNA.720-201ENST00000517166 92 ntBASIC-4.67□□□□□ -3.16
VPS13CQ709C8 RNU6-1227P-201ENST00000383981 107 ntBASIC-4.67□□□□□ -3.16
VPS13CQ709C8 MTND2P14-201ENST00000482139 351 ntBASIC-4.67□□□□□ -3.16
VPS13CQ709C8 SNORA40.14-201ENST00000516543 86 ntBASIC-4.68□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms