Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL391099.1-201ENST00000624635 187 ntBASIC1.4□□□□□ -2.19
VARS2Q5ST30 SNORD114-27-201ENST00000363766 70 ntBASIC1.39□□□□□ -2.19
VARS2Q5ST30 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
VARS2Q5ST30 RNY1P9-201ENST00000532431 109 ntBASIC1.39□□□□□ -2.19
VARS2Q5ST30 MIR3925-201ENST00000584674 77 ntBASIC1.39□□□□□ -2.19
VARS2Q5ST30 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
VARS2Q5ST30 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.38□□□□□ -2.19
VARS2Q5ST30 RNA5SP404-201ENST00000517118 132 ntBASIC1.38□□□□□ -2.19
VARS2Q5ST30 MIR6755-201ENST00000619993 66 ntBASIC1.38□□□□□ -2.19
VARS2Q5ST30 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
VARS2Q5ST30 MIR202-201ENST00000362219 110 ntBASIC1.36□□□□□ -2.19
VARS2Q5ST30 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
VARS2Q5ST30 MIR140-201ENST00000385282 100 ntBASIC1.36□□□□□ -2.19
VARS2Q5ST30 MIR548Q-201ENST00000408404 100 ntBASIC1.36□□□□□ -2.19
VARS2Q5ST30 RNU7-55P-201ENST00000459426 62 ntBASIC1.36□□□□□ -2.19
VARS2Q5ST30 AL353765.1-201ENST00000605514 183 ntBASIC1.36□□□□□ -2.19
VARS2Q5ST30 RNU6-973P-201ENST00000364690 107 ntBASIC1.35□□□□□ -2.19
VARS2Q5ST30 SNORD19-201ENST00000391191 68 ntBASIC1.35□□□□□ -2.19
VARS2Q5ST30 RNU6-1133P-201ENST00000410963 100 ntBASIC1.35□□□□□ -2.19
VARS2Q5ST30 SNORA40.8-201ENST00000411034 126 ntBASIC1.35□□□□□ -2.19
VARS2Q5ST30 uc_338.36-201ENST00000622331 158 ntBASIC1.35□□□□□ -2.19
VARS2Q5ST30 SNORA36.2-201ENST00000384004 127 ntBASIC1.34□□□□□ -2.19
VARS2Q5ST30 MIR760-201ENST00000390220 80 ntBASIC1.34□□□□□ -2.19
VARS2Q5ST30 RNU6-176P-201ENST00000517196 105 ntBASIC1.34□□□□□ -2.19
VARS2Q5ST30 RNA5SP169-201ENST00000517268 117 ntBASIC1.34□□□□□ -2.19
VARS2Q5ST30 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
VARS2Q5ST30 RNA5SP98-201ENST00000363158 137 ntBASIC1.33□□□□□ -2.2
VARS2Q5ST30 SNORA17.4-201ENST00000391287 132 ntBASIC1.33□□□□□ -2.2
VARS2Q5ST30 AC096531.1-201ENST00000419107 107 ntBASIC1.32□□□□□ -2.2
VARS2Q5ST30 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
VARS2Q5ST30 RNA5SP436-201ENST00000516020 115 ntBASIC1.31□□□□□ -2.2
VARS2Q5ST30 RN7SL793P-201ENST00000583259 296 ntBASIC1.31□□□□□ -2.2
VARS2Q5ST30 Y_RNA.30-201ENST00000362572 97 ntBASIC1.3□□□□□ -2.2
VARS2Q5ST30 RNA5SP128-201ENST00000365305 116 ntBASIC1.3□□□□□ -2.2
VARS2Q5ST30 RNY3P8-201ENST00000411366 126 ntBASIC1.3□□□□□ -2.2
VARS2Q5ST30 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
VARS2Q5ST30 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.29□□□□□ -2.2
VARS2Q5ST30 SNORD71-201ENST00000411292 86 ntBASIC1.29□□□□□ -2.2
VARS2Q5ST30 RNU4-54P-201ENST00000516428 129 ntBASIC1.29□□□□□ -2.2
VARS2Q5ST30 MIR6767-201ENST00000637302 66 ntBASIC1.29□□□□□ -2.2
VARS2Q5ST30 Y_RNA.178-201ENST00000363832 102 ntBASIC1.28□□□□□ -2.2
VARS2Q5ST30 SCARNA11.2-201ENST00000517183 154 ntBASIC1.28□□□□□ -2.2
VARS2Q5ST30 SNORA42.1-201ENST00000363515 137 ntBASIC1.27□□□□□ -2.21
VARS2Q5ST30 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
VARS2Q5ST30 MIR518A1-201ENST00000385068 85 ntBASIC1.27□□□□□ -2.21
VARS2Q5ST30 MIR499B-201ENST00000636498 73 ntBASIC1.26□□□□□ -2.21
VARS2Q5ST30 RNU6-1233P-201ENST00000362922 102 ntBASIC1.25□□□□□ -2.21
VARS2Q5ST30 MIR216A-201ENST00000385063 110 ntBASIC1.25□□□□□ -2.21
VARS2Q5ST30 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.25□□□□□ -2.21
VARS2Q5ST30 RNU6-900P-201ENST00000384498 102 ntBASIC1.24□□□□□ -2.21
VARS2Q5ST30 AC087343.1-201ENST00000477341 475 ntBASIC1.24□□□□□ -2.21
VARS2Q5ST30 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
VARS2Q5ST30 MIR5000-201ENST00000577717 103 ntBASIC1.23□□□□□ -2.21
VARS2Q5ST30 MIR5704-201ENST00000584029 77 ntBASIC1.23□□□□□ -2.21
VARS2Q5ST30 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VARS2Q5ST30 MIR8068-201ENST00000618032 68 ntBASIC1.22□□□□□ -2.21
VARS2Q5ST30 RNU6-1091P-201ENST00000363945 107 ntBASIC1.21□□□□□ -2.22
VARS2Q5ST30 RNU6-608P-201ENST00000383927 104 ntBASIC1.2□□□□□ -2.22
VARS2Q5ST30 MIR124-2-201ENST00000385081 109 ntBASIC1.2□□□□□ -2.22
VARS2Q5ST30 AC108740.1-201ENST00000498629 225 ntBASIC1.19□□□□□ -2.22
VARS2Q5ST30 AP002795.1-201ENST00000534879 84 ntBASIC1.19□□□□□ -2.22
VARS2Q5ST30 RNU7-129P-201ENST00000516128 62 ntBASIC1.18□□□□□ -2.22
VARS2Q5ST30 MIR6854-201ENST00000614935 69 ntBASIC1.18□□□□□ -2.22
VARS2Q5ST30 SNORD60-201ENST00000383903 83 ntBASIC1.17□□□□□ -2.22
VARS2Q5ST30 AL590095.2-201ENST00000604136 117 ntBASIC1.17□□□□□ -2.22
VARS2Q5ST30 Y_RNA.134-201ENST00000363435 105 ntBASIC1.16□□□□□ -2.22
VARS2Q5ST30 Y_RNA.382-201ENST00000365672 114 ntBASIC1.16□□□□□ -2.22
VARS2Q5ST30 MIR548N-201ENST00000408742 75 ntBASIC1.15□□□□□ -2.23
VARS2Q5ST30 AC211469.2-201ENST00000605461 205 ntBASIC1.15□□□□□ -2.23
VARS2Q5ST30 RNA5SP457-201ENST00000363657 124 ntBASIC1.13□□□□□ -2.23
VARS2Q5ST30 RNU6-455P-201ENST00000384681 107 ntBASIC1.13□□□□□ -2.23
VARS2Q5ST30 MIR193B-201ENST00000384907 83 ntBASIC1.13□□□□□ -2.23
VARS2Q5ST30 RNU6-863P-201ENST00000515989 104 ntBASIC1.13□□□□□ -2.23
VARS2Q5ST30 MIR1273G-201ENST00000577677 100 ntBASIC1.13□□□□□ -2.23
VARS2Q5ST30 uc_338.17-201ENST00000619633 179 ntBASIC1.13□□□□□ -2.23
VARS2Q5ST30 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
VARS2Q5ST30 Y_RNA.68-201ENST00000362881 102 ntBASIC1.12□□□□□ -2.23
VARS2Q5ST30 Y_RNA.519-201ENST00000384553 102 ntBASIC1.12□□□□□ -2.23
VARS2Q5ST30 MIR548T-201ENST00000408369 74 ntBASIC1.12□□□□□ -2.23
VARS2Q5ST30 RNA5SP67-201ENST00000516422 131 ntBASIC1.12□□□□□ -2.23
VARS2Q5ST30 MIR4661-201ENST00000582720 75 ntBASIC1.12□□□□□ -2.23
VARS2Q5ST30 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
VARS2Q5ST30 MIR5683-201ENST00000636514 76 ntBASIC1.12□□□□□ -2.23
VARS2Q5ST30 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
VARS2Q5ST30 SNORD115.2-201ENST00000391126 59 ntBASIC1.11□□□□□ -2.23
VARS2Q5ST30 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
VARS2Q5ST30 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
VARS2Q5ST30 CYP3A137P-201ENST00000562436 69 ntBASIC1.11□□□□□ -2.23
VARS2Q5ST30 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
VARS2Q5ST30 MIR608-201ENST00000384820 100 ntBASIC1.09□□□□□ -2.23
VARS2Q5ST30 MIR643-201ENST00000385267 97 ntBASIC1.09□□□□□ -2.23
VARS2Q5ST30 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
VARS2Q5ST30 AC114755.3-201ENST00000481111 251 ntBASIC1.09□□□□□ -2.23
VARS2Q5ST30 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
VARS2Q5ST30 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.07□□□□□ -2.24
VARS2Q5ST30 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
VARS2Q5ST30 Y_RNA.115-201ENST00000363272 98 ntBASIC1.05□□□□□ -2.24
VARS2Q5ST30 Y_RNA.433-201ENST00000384089 102 ntBASIC1.05□□□□□ -2.24
VARS2Q5ST30 SNORD56B-201ENST00000384713 71 ntBASIC1.05□□□□□ -2.24
VARS2Q5ST30 AL353691.2-201ENST00000443795 59 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms