Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MIR4464-201ENST00000580818 92 ntBASIC0.3□□□□□ -2.36
SLC44A4Q53GD3 RNU6-246P-201ENST00000384702 107 ntBASIC0.29□□□□□ -2.36
SLC44A4Q53GD3 RNA5SP285-201ENST00000516619 119 ntBASIC0.29□□□□□ -2.36
SLC44A4Q53GD3 RNU6-35P-201ENST00000384530 107 ntBASIC0.28□□□□□ -2.36
SLC44A4Q53GD3 SNORD116-16-201ENST00000384533 92 ntBASIC0.28□□□□□ -2.36
SLC44A4Q53GD3 MIR6718-201ENST00000616153 80 ntBASIC0.28□□□□□ -2.36
SLC44A4Q53GD3 SNORD1B-201ENST00000363091 84 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 RNU6-231P-201ENST00000517122 103 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 AL353803.5-201ENST00000599815 141 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 MIR6507-201ENST00000613630 70 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 MIR8068-201ENST00000618032 68 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 uc_338.36-201ENST00000622331 158 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 RNU6-614P-201ENST00000384369 107 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 SNORD2-201ENST00000459163 69 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 RNU7-154P-201ENST00000516194 62 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 SNORA40.16-201ENST00000517238 121 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 U6.59-201ENST00000615686 107 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 MIR6888-201ENST00000621977 67 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 RNU6-598P-201ENST00000364017 105 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 MIR527-201ENST00000385244 85 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 RNA5SP476-201ENST00000516613 103 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 MIR5704-201ENST00000584029 77 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 U2.18-201ENST00000622185 84 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 RNU6-458P-201ENST00000384179 107 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 U6.58-201ENST00000613107 107 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 MIR6514-201ENST00000622549 70 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 RNA5SP163-201ENST00000410304 99 ntBASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 RNU7-55P-201ENST00000459426 62 ntBASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 RNU6-180P-201ENST00000516697 61 ntBASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 MIR655-201ENST00000362159 97 ntBASIC0.22□□□□□ -2.37
SLC44A4Q53GD3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
SLC44A4Q53GD3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.22□□□□□ -2.37
SLC44A4Q53GD3 MIR4432-201ENST00000581823 84 ntBASIC0.22□□□□□ -2.37
SLC44A4Q53GD3 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNU6-810P-201ENST00000364001 107 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNU6-936P-201ENST00000384005 107 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 SNORD56B-201ENST00000384713 71 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 SNORD116.2-201ENST00000391251 93 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNU6-141P-201ENST00000410499 105 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNU6-172P-201ENST00000411000 93 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 AC244250.2-201ENST00000418731 148 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNA5SP470-201ENST00000516463 106 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 MIR4490-201ENST00000582647 84 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 AL445584.3-201ENST00000617173 78 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 RNU6-1184P-201ENST00000384588 108 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 MIR579-201ENST00000385221 98 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 RNU6-980P-201ENST00000516925 103 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 AL391099.1-201ENST00000624635 187 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 RNU6-455P-201ENST00000384681 107 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 MIR329-2-201ENST00000385029 84 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 MIR610-201ENST00000385139 96 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 RNU7-88P-201ENST00000458752 63 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 CR383656.4-201ENST00000546909 122 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 MIR5190-201ENST00000581537 80 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 AC108676.2-201ENST00000605225 163 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 SNORD114-5-201ENST00000362928 70 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 AC096531.1-201ENST00000419107 107 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 AC114755.3-201ENST00000481111 251 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 RNU6-1262P-201ENST00000516217 96 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 U7.5-201ENST00000517224 61 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 SNORD114-9-201ENST00000364370 72 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 RNU6-973P-201ENST00000364690 107 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 RNU6-900P-201ENST00000384498 102 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 RNU6-520P-201ENST00000384717 104 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 HAR1A.1-201ENST00000459583 118 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 MIR4743-201ENST00000584576 69 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 MIR7110-201ENST00000612638 86 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 MIR6759-201ENST00000638110 65 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 RNU6-974P-201ENST00000384099 108 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 SNORA40B-201ENST00000385573 128 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 MIR892B-201ENST00000401279 77 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 RNU7-165P-201ENST00000458864 60 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 RNU7-151P-201ENST00000516930 53 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 RNU6-924P-201ENST00000362926 108 ntBASIC0.15□□□□□ -2.39
SLC44A4Q53GD3 Y_RNA.722-201ENST00000517279 114 ntBASIC0.15□□□□□ -2.39
SLC44A4Q53GD3 MIR4280-201ENST00000582178 76 ntBASIC0.15□□□□□ -2.39
SLC44A4Q53GD3 RNU6-929P-201ENST00000384429 107 ntBASIC0.14□□□□□ -2.39
SLC44A4Q53GD3 RNU6-1267P-201ENST00000410747 107 ntBASIC0.14□□□□□ -2.39
SLC44A4Q53GD3 RNU6-1174P-201ENST00000517278 101 ntBASIC0.14□□□□□ -2.39
SLC44A4Q53GD3 MIR148A-201ENST00000362215 68 ntBASIC0.13□□□□□ -2.39
SLC44A4Q53GD3 RNU4-88P-201ENST00000411220 86 ntBASIC0.13□□□□□ -2.39
SLC44A4Q53GD3 MTRNR2L9-201ENST00000622562 75 ntBASIC0.13□□□□□ -2.39
SLC44A4Q53GD3 snoR1.1-201ENST00000628177 80 ntBASIC0.13□□□□□ -2.39
SLC44A4Q53GD3 MIR124-2-201ENST00000385081 109 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms