Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MIR4464-201ENST00000580818 92 ntBASIC0.3□□□□□ -2.36
SLC44A4Q53GD3 RNU6-246P-201ENST00000384702 107 ntBASIC0.29□□□□□ -2.36
SLC44A4Q53GD3 RNA5SP285-201ENST00000516619 119 ntBASIC0.29□□□□□ -2.36
SLC44A4Q53GD3 RNU6-35P-201ENST00000384530 107 ntBASIC0.28□□□□□ -2.36
SLC44A4Q53GD3 SNORD116-16-201ENST00000384533 92 ntBASIC0.28□□□□□ -2.36
SLC44A4Q53GD3 MIR6718-201ENST00000616153 80 ntBASIC0.28□□□□□ -2.36
SLC44A4Q53GD3 SNORD1B-201ENST00000363091 84 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 RNU6-231P-201ENST00000517122 103 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 AL353803.5-201ENST00000599815 141 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 MIR6507-201ENST00000613630 70 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 MIR8068-201ENST00000618032 68 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 uc_338.36-201ENST00000622331 158 ntBASIC0.27□□□□□ -2.37
SLC44A4Q53GD3 RNU6-614P-201ENST00000384369 107 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 SNORD2-201ENST00000459163 69 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 RNU7-154P-201ENST00000516194 62 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 SNORA40.16-201ENST00000517238 121 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 U6.59-201ENST00000615686 107 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 MIR6888-201ENST00000621977 67 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
SLC44A4Q53GD3 RNU6-598P-201ENST00000364017 105 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 MIR527-201ENST00000385244 85 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 RNA5SP476-201ENST00000516613 103 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 MIR5704-201ENST00000584029 77 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 U2.18-201ENST00000622185 84 ntBASIC0.25□□□□□ -2.37
SLC44A4Q53GD3 RNU6-458P-201ENST00000384179 107 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 U6.58-201ENST00000613107 107 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 MIR6514-201ENST00000622549 70 ntBASIC0.24□□□□□ -2.37
SLC44A4Q53GD3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 RNA5SP163-201ENST00000410304 99 ntBASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 RNU7-55P-201ENST00000459426 62 ntBASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 RNU6-180P-201ENST00000516697 61 ntBASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
SLC44A4Q53GD3 MIR655-201ENST00000362159 97 ntBASIC0.22□□□□□ -2.37
SLC44A4Q53GD3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
SLC44A4Q53GD3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.22□□□□□ -2.37
SLC44A4Q53GD3 MIR4432-201ENST00000581823 84 ntBASIC0.22□□□□□ -2.37
SLC44A4Q53GD3 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNU6-810P-201ENST00000364001 107 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNU6-936P-201ENST00000384005 107 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 SNORD56B-201ENST00000384713 71 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 SNORD116.2-201ENST00000391251 93 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNU6-141P-201ENST00000410499 105 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNU6-172P-201ENST00000411000 93 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 AC244250.2-201ENST00000418731 148 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNA5SP470-201ENST00000516463 106 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 MIR4490-201ENST00000582647 84 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 AL445584.3-201ENST00000617173 78 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.21□□□□□ -2.38
SLC44A4Q53GD3 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 RNU6-1184P-201ENST00000384588 108 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 MIR579-201ENST00000385221 98 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 RNU6-980P-201ENST00000516925 103 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 AL391099.1-201ENST00000624635 187 ntBASIC0.2□□□□□ -2.38
SLC44A4Q53GD3 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 RNU6-455P-201ENST00000384681 107 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 MIR329-2-201ENST00000385029 84 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 MIR610-201ENST00000385139 96 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 RNU7-88P-201ENST00000458752 63 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 CR383656.4-201ENST00000546909 122 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 MIR5190-201ENST00000581537 80 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 AC108676.2-201ENST00000605225 163 ntBASIC0.19□□□□□ -2.38
SLC44A4Q53GD3 SNORD114-5-201ENST00000362928 70 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 AC096531.1-201ENST00000419107 107 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 AC114755.3-201ENST00000481111 251 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 RNU6-1262P-201ENST00000516217 96 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 U7.5-201ENST00000517224 61 ntBASIC0.18□□□□□ -2.38
SLC44A4Q53GD3 SNORD114-9-201ENST00000364370 72 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 RNU6-973P-201ENST00000364690 107 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 RNU6-900P-201ENST00000384498 102 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 RNU6-520P-201ENST00000384717 104 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 HAR1A.1-201ENST00000459583 118 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 MIR4743-201ENST00000584576 69 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 MIR7110-201ENST00000612638 86 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 MIR6759-201ENST00000638110 65 ntBASIC0.17□□□□□ -2.38
SLC44A4Q53GD3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 RNU6-974P-201ENST00000384099 108 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 SNORA40B-201ENST00000385573 128 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 MIR892B-201ENST00000401279 77 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 RNU7-165P-201ENST00000458864 60 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 RNU7-151P-201ENST00000516930 53 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.16□□□□□ -2.38
SLC44A4Q53GD3 RNU6-924P-201ENST00000362926 108 ntBASIC0.15□□□□□ -2.39
SLC44A4Q53GD3 Y_RNA.722-201ENST00000517279 114 ntBASIC0.15□□□□□ -2.39
SLC44A4Q53GD3 MIR4280-201ENST00000582178 76 ntBASIC0.15□□□□□ -2.39
SLC44A4Q53GD3 RNU6-929P-201ENST00000384429 107 ntBASIC0.14□□□□□ -2.39
SLC44A4Q53GD3 RNU6-1267P-201ENST00000410747 107 ntBASIC0.14□□□□□ -2.39
SLC44A4Q53GD3 RNU6-1174P-201ENST00000517278 101 ntBASIC0.14□□□□□ -2.39
SLC44A4Q53GD3 MIR148A-201ENST00000362215 68 ntBASIC0.13□□□□□ -2.39
SLC44A4Q53GD3 RNU4-88P-201ENST00000411220 86 ntBASIC0.13□□□□□ -2.39
SLC44A4Q53GD3 MTRNR2L9-201ENST00000622562 75 ntBASIC0.13□□□□□ -2.39
SLC44A4Q53GD3 snoR1.1-201ENST00000628177 80 ntBASIC0.13□□□□□ -2.39
SLC44A4Q53GD3 MIR124-2-201ENST00000385081 109 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms