Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 MIR876-201ENST00000401147 81 ntBASIC0.68□□□□□ -2.3
TMEM259Q4ZIN3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
TMEM259Q4ZIN3 HAR1A.1-201ENST00000459583 118 ntBASIC0.68□□□□□ -2.3
TMEM259Q4ZIN3 MIR330-201ENST00000362196 94 ntBASIC0.67□□□□□ -2.3
TMEM259Q4ZIN3 RNU6-127P-201ENST00000390897 107 ntBASIC0.67□□□□□ -2.3
TMEM259Q4ZIN3 RNU6-980P-201ENST00000516925 103 ntBASIC0.67□□□□□ -2.3
TMEM259Q4ZIN3 RNA5SP330-201ENST00000517096 96 ntBASIC0.67□□□□□ -2.3
TMEM259Q4ZIN3 MIR4432-201ENST00000581823 84 ntBASIC0.67□□□□□ -2.3
TMEM259Q4ZIN3 MIR4490-201ENST00000582647 84 ntBASIC0.67□□□□□ -2.3
TMEM259Q4ZIN3 Y_RNA.698-201ENST00000516798 118 ntBASIC0.66□□□□□ -2.3
TMEM259Q4ZIN3 SNORA40B-201ENST00000385573 128 ntBASIC0.65□□□□□ -2.31
TMEM259Q4ZIN3 RNA5SP470-201ENST00000516463 106 ntBASIC0.65□□□□□ -2.31
TMEM259Q4ZIN3 RNA5SP476-201ENST00000516613 103 ntBASIC0.65□□□□□ -2.31
TMEM259Q4ZIN3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.65□□□□□ -2.31
TMEM259Q4ZIN3 SNORD115-23-201ENST00000364461 82 ntBASIC0.64□□□□□ -2.31
TMEM259Q4ZIN3 Y_RNA.379-201ENST00000365653 102 ntBASIC0.64□□□□□ -2.31
TMEM259Q4ZIN3 RNU7-88P-201ENST00000458752 63 ntBASIC0.64□□□□□ -2.31
TMEM259Q4ZIN3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.64□□□□□ -2.31
TMEM259Q4ZIN3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
TMEM259Q4ZIN3 RNU6-35P-201ENST00000384530 107 ntBASIC0.63□□□□□ -2.31
TMEM259Q4ZIN3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.63□□□□□ -2.31
TMEM259Q4ZIN3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.63□□□□□ -2.31
TMEM259Q4ZIN3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
TMEM259Q4ZIN3 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
TMEM259Q4ZIN3 MIR4464-201ENST00000580818 92 ntBASIC0.61□□□□□ -2.31
TMEM259Q4ZIN3 MIR6888-201ENST00000621977 67 ntBASIC0.61□□□□□ -2.31
TMEM259Q4ZIN3 MIR6086-201ENST00000638065 55 ntBASIC0.61□□□□□ -2.31
TMEM259Q4ZIN3 AC090625.1-201ENST00000357130 210 ntBASIC0.6□□□□□ -2.31
TMEM259Q4ZIN3 RNU7-151P-201ENST00000516930 53 ntBASIC0.6□□□□□ -2.31
TMEM259Q4ZIN3 AC069113.3-201ENST00000521019 150 ntBASIC0.6□□□□□ -2.31
TMEM259Q4ZIN3 AC108676.2-201ENST00000605225 163 ntBASIC0.6□□□□□ -2.31
TMEM259Q4ZIN3 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
TMEM259Q4ZIN3 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
TMEM259Q4ZIN3 RNU4-33P-201ENST00000364316 85 ntBASIC0.59□□□□□ -2.31
TMEM259Q4ZIN3 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
TMEM259Q4ZIN3 MIR5704-201ENST00000584029 77 ntBASIC0.59□□□□□ -2.31
TMEM259Q4ZIN3 MIR6514-201ENST00000622549 70 ntBASIC0.59□□□□□ -2.31
TMEM259Q4ZIN3 snoR1.1-201ENST00000628177 80 ntBASIC0.59□□□□□ -2.31
TMEM259Q4ZIN3 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
TMEM259Q4ZIN3 AC108740.1-201ENST00000498629 225 ntBASIC0.58□□□□□ -2.32
TMEM259Q4ZIN3 U7.5-201ENST00000517224 61 ntBASIC0.58□□□□□ -2.32
TMEM259Q4ZIN3 RNU6-1262P-201ENST00000516217 96 ntBASIC0.57□□□□□ -2.32
TMEM259Q4ZIN3 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
TMEM259Q4ZIN3 MIR8068-201ENST00000618032 68 ntBASIC0.57□□□□□ -2.32
TMEM259Q4ZIN3 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
TMEM259Q4ZIN3 RNA5SP98-201ENST00000363158 137 ntBASIC0.56□□□□□ -2.32
TMEM259Q4ZIN3 MIR548H2-201ENST00000408874 88 ntBASIC0.56□□□□□ -2.32
TMEM259Q4ZIN3 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
TMEM259Q4ZIN3 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
TMEM259Q4ZIN3 AL627230.5-201ENST00000619807 58 ntBASIC0.56□□□□□ -2.32
TMEM259Q4ZIN3 RNU6-924P-201ENST00000362926 108 ntBASIC0.55□□□□□ -2.32
TMEM259Q4ZIN3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.55□□□□□ -2.32
TMEM259Q4ZIN3 RNA5SP163-201ENST00000410304 99 ntBASIC0.55□□□□□ -2.32
TMEM259Q4ZIN3 MIR548X-201ENST00000580069 75 ntBASIC0.55□□□□□ -2.32
TMEM259Q4ZIN3 AL391099.1-201ENST00000624635 187 ntBASIC0.55□□□□□ -2.32
TMEM259Q4ZIN3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.54□□□□□ -2.32
TMEM259Q4ZIN3 RNA5SP285-201ENST00000516619 119 ntBASIC0.53□□□□□ -2.32
TMEM259Q4ZIN3 AL445584.3-201ENST00000617173 78 ntBASIC0.53□□□□□ -2.32
TMEM259Q4ZIN3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
TMEM259Q4ZIN3 MIR429-201ENST00000362106 83 ntBASIC0.52□□□□□ -2.33
TMEM259Q4ZIN3 RNU6-455P-201ENST00000384681 107 ntBASIC0.52□□□□□ -2.33
TMEM259Q4ZIN3 RNU6-1267P-201ENST00000410747 107 ntBASIC0.52□□□□□ -2.33
TMEM259Q4ZIN3 RNU6-1133P-201ENST00000410963 100 ntBASIC0.52□□□□□ -2.33
TMEM259Q4ZIN3 MIR6507-201ENST00000613630 70 ntBASIC0.52□□□□□ -2.33
TMEM259Q4ZIN3 MIR1197-201ENST00000408818 88 ntBASIC0.51□□□□□ -2.33
TMEM259Q4ZIN3 RNU6-974P-201ENST00000384099 108 ntBASIC0.5□□□□□ -2.33
TMEM259Q4ZIN3 MIR593-201ENST00000384856 100 ntBASIC0.5□□□□□ -2.33
TMEM259Q4ZIN3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.5□□□□□ -2.33
TMEM259Q4ZIN3 Y_RNA.69-201ENST00000362885 109 ntBASIC0.49□□□□□ -2.33
TMEM259Q4ZIN3 RNU7-55P-201ENST00000459426 62 ntBASIC0.49□□□□□ -2.33
TMEM259Q4ZIN3 RNU6-1174P-201ENST00000517278 101 ntBASIC0.49□□□□□ -2.33
TMEM259Q4ZIN3 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
TMEM259Q4ZIN3 MIR4315-1-201ENST00000636800 73 ntBASIC0.48□□□□□ -2.33
TMEM259Q4ZIN3 MIR4315-2-201ENST00000640925 73 ntBASIC0.48□□□□□ -2.33
TMEM259Q4ZIN3 RNU6-696P-201ENST00000390834 107 ntBASIC0.47□□□□□ -2.33
TMEM259Q4ZIN3 RNA5SP63-201ENST00000391225 112 ntBASIC0.47□□□□□ -2.33
TMEM259Q4ZIN3 MIR610-201ENST00000385139 96 ntBASIC0.46□□□□□ -2.34
TMEM259Q4ZIN3 RNU6-930P-201ENST00000390938 100 ntBASIC0.46□□□□□ -2.34
TMEM259Q4ZIN3 MIR892B-201ENST00000401279 77 ntBASIC0.46□□□□□ -2.34
TMEM259Q4ZIN3 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
TMEM259Q4ZIN3 RNA5SP134-201ENST00000516492 96 ntBASIC0.46□□□□□ -2.34
TMEM259Q4ZIN3 RNU6-419P-201ENST00000517030 63 ntBASIC0.46□□□□□ -2.34
TMEM259Q4ZIN3 RNU6-973P-201ENST00000364690 107 ntBASIC0.45□□□□□ -2.34
TMEM259Q4ZIN3 MIR124-2-201ENST00000385081 109 ntBASIC0.45□□□□□ -2.34
TMEM259Q4ZIN3 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.45□□□□□ -2.34
TMEM259Q4ZIN3 SNORD56B-201ENST00000384713 71 ntBASIC0.44□□□□□ -2.34
TMEM259Q4ZIN3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 RNU6-900P-201ENST00000384498 102 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 MIR329-2-201ENST00000385029 84 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 snoU13.19-201ENST00000459148 104 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 RNU6-1206P-201ENST00000516339 103 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 RNU6-180P-201ENST00000516697 61 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 CR383656.4-201ENST00000546909 122 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 AC023932.2-201ENST00000603176 175 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 AC104408.1-201ENST00000605241 170 ntBASIC0.43□□□□□ -2.34
TMEM259Q4ZIN3 MIR548AA1-201ENST00000384971 97 ntBASIC0.42□□□□□ -2.34
TMEM259Q4ZIN3 AC096531.1-201ENST00000419107 107 ntBASIC0.42□□□□□ -2.34
TMEM259Q4ZIN3 AL445193.1-201ENST00000441183 141 ntBASIC0.42□□□□□ -2.34
TMEM259Q4ZIN3 SNORD57-201ENST00000448188 72 ntBASIC0.42□□□□□ -2.34
TMEM259Q4ZIN3 Y_RNA.139-201ENST00000363464 102 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms