Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.22□□□□□ -2.37
THBS3P49746 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.22□□□□□ -2.37
THBS3P49746 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.22□□□□□ -2.37
THBS3P49746 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
THBS3P49746 RNU6-180P-201ENST00000516697 61 ntBASIC0.21□□□□□ -2.38
THBS3P49746 CR383656.4-201ENST00000546909 122 ntBASIC0.21□□□□□ -2.38
THBS3P49746 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.21□□□□□ -2.38
THBS3P49746 AL353803.5-201ENST00000599815 141 ntBASIC0.21□□□□□ -2.38
THBS3P49746 AC104408.1-201ENST00000605241 170 ntBASIC0.21□□□□□ -2.38
THBS3P49746 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
THBS3P49746 RNU6-614P-201ENST00000384369 107 ntBASIC0.2□□□□□ -2.38
THBS3P49746 RNU6-987P-201ENST00000384759 104 ntBASIC0.2□□□□□ -2.38
THBS3P49746 MIR892B-201ENST00000401279 77 ntBASIC0.2□□□□□ -2.38
THBS3P49746 RNU7-55P-201ENST00000459426 62 ntBASIC0.2□□□□□ -2.38
THBS3P49746 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
THBS3P49746 U6.59-201ENST00000615686 107 ntBASIC0.2□□□□□ -2.38
THBS3P49746 uc_338.36-201ENST00000622331 158 ntBASIC0.2□□□□□ -2.38
THBS3P49746 MIR148A-201ENST00000362215 68 ntBASIC0.19□□□□□ -2.38
THBS3P49746 RNU6-35P-201ENST00000384530 107 ntBASIC0.19□□□□□ -2.38
THBS3P49746 RNU6-520P-201ENST00000384717 104 ntBASIC0.19□□□□□ -2.38
THBS3P49746 MIR610-201ENST00000385139 96 ntBASIC0.19□□□□□ -2.38
THBS3P49746 RNU4-37P-201ENST00000410214 84 ntBASIC0.19□□□□□ -2.38
THBS3P49746 MIR4432-201ENST00000581823 84 ntBASIC0.19□□□□□ -2.38
THBS3P49746 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
THBS3P49746 MIR4743-201ENST00000584576 69 ntBASIC0.19□□□□□ -2.38
THBS3P49746 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
THBS3P49746 MIR6507-201ENST00000613630 70 ntBASIC0.19□□□□□ -2.38
THBS3P49746 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.19□□□□□ -2.38
THBS3P49746 Y_RNA.109-201ENST00000363215 102 ntBASIC0.18□□□□□ -2.38
THBS3P49746 SNORD113-4-201ENST00000364802 75 ntBASIC0.18□□□□□ -2.38
THBS3P49746 RNU6-900P-201ENST00000384498 102 ntBASIC0.18□□□□□ -2.38
THBS3P49746 RNU6-246P-201ENST00000384702 107 ntBASIC0.18□□□□□ -2.38
THBS3P49746 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
THBS3P49746 RNA5SP285-201ENST00000516619 119 ntBASIC0.18□□□□□ -2.38
THBS3P49746 RNU6-231P-201ENST00000517122 103 ntBASIC0.18□□□□□ -2.38
THBS3P49746 snoR1.1-201ENST00000628177 80 ntBASIC0.18□□□□□ -2.38
THBS3P49746 SNORD114-5-201ENST00000362928 70 ntBASIC0.17□□□□□ -2.38
THBS3P49746 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
THBS3P49746 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
THBS3P49746 RNU6-973P-201ENST00000364690 107 ntBASIC0.17□□□□□ -2.38
THBS3P49746 RNU6-458P-201ENST00000384179 107 ntBASIC0.17□□□□□ -2.38
THBS3P49746 RNU6-455P-201ENST00000384681 107 ntBASIC0.17□□□□□ -2.38
THBS3P49746 RNU7-119P-201ENST00000459279 63 ntBASIC0.17□□□□□ -2.38
THBS3P49746 Y_RNA.698-201ENST00000516798 118 ntBASIC0.17□□□□□ -2.38
THBS3P49746 U6.58-201ENST00000613107 107 ntBASIC0.17□□□□□ -2.38
THBS3P49746 MIR2909-201ENST00000617113 69 ntBASIC0.17□□□□□ -2.38
THBS3P49746 AL391099.1-201ENST00000624635 187 ntBASIC0.17□□□□□ -2.38
THBS3P49746 MIR429-201ENST00000362106 83 ntBASIC0.16□□□□□ -2.38
THBS3P49746 AC096531.1-201ENST00000419107 107 ntBASIC0.16□□□□□ -2.38
THBS3P49746 RNU7-165P-201ENST00000458864 60 ntBASIC0.16□□□□□ -2.38
THBS3P49746 MIR4464-201ENST00000580818 92 ntBASIC0.16□□□□□ -2.38
THBS3P49746 SNORD1B-201ENST00000363091 84 ntBASIC0.15□□□□□ -2.39
THBS3P49746 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
THBS3P49746 RNU6-1133P-201ENST00000410963 100 ntBASIC0.15□□□□□ -2.39
THBS3P49746 AC244250.2-201ENST00000418731 148 ntBASIC0.15□□□□□ -2.39
THBS3P49746 RNU7-159P-201ENST00000459284 62 ntBASIC0.15□□□□□ -2.39
THBS3P49746 AC108676.2-201ENST00000605225 163 ntBASIC0.15□□□□□ -2.39
THBS3P49746 SNORA62.4-201ENST00000365504 151 ntBASIC0.14□□□□□ -2.39
THBS3P49746 MIR7110-201ENST00000612638 86 ntBASIC0.14□□□□□ -2.39
THBS3P49746 MIR6888-201ENST00000621977 67 ntBASIC0.14□□□□□ -2.39
THBS3P49746 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
THBS3P49746 AL445584.3-201ENST00000617173 78 ntBASIC0.13□□□□□ -2.39
THBS3P49746 MIR655-201ENST00000362159 97 ntBASIC0.12□□□□□ -2.39
THBS3P49746 RNU6-1312P-201ENST00000362425 108 ntBASIC0.12□□□□□ -2.39
THBS3P49746 RNU6-598P-201ENST00000364017 105 ntBASIC0.12□□□□□ -2.39
THBS3P49746 SNORD116.2-201ENST00000391251 93 ntBASIC0.12□□□□□ -2.39
THBS3P49746 RNU6-141P-201ENST00000410499 105 ntBASIC0.12□□□□□ -2.39
THBS3P49746 RNU6-172P-201ENST00000411000 93 ntBASIC0.12□□□□□ -2.39
THBS3P49746 SNORA40.16-201ENST00000517238 121 ntBASIC0.12□□□□□ -2.39
THBS3P49746 MIR5704-201ENST00000584029 77 ntBASIC0.12□□□□□ -2.39
THBS3P49746 MIR6718-201ENST00000616153 80 ntBASIC0.12□□□□□ -2.39
THBS3P49746 RNU6-929P-201ENST00000384429 107 ntBASIC0.11□□□□□ -2.39
THBS3P49746 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
THBS3P49746 MIR8068-201ENST00000618032 68 ntBASIC0.11□□□□□ -2.39
THBS3P49746 MIR7978-201ENST00000636158 59 ntBASIC0.11□□□□□ -2.39
THBS3P49746 RNU6-1184P-201ENST00000384588 108 ntBASIC0.1□□□□□ -2.39
THBS3P49746 SNORD56B-201ENST00000384713 71 ntBASIC0.1□□□□□ -2.39
THBS3P49746 MIR329-2-201ENST00000385029 84 ntBASIC0.1□□□□□ -2.39
THBS3P49746 SNORA40B-201ENST00000385573 128 ntBASIC0.1□□□□□ -2.39
THBS3P49746 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.1□□□□□ -2.39
THBS3P49746 RNU6-810P-201ENST00000364001 107 ntBASIC0.09□□□□□ -2.4
THBS3P49746 RNU6-1262P-201ENST00000516217 96 ntBASIC0.09□□□□□ -2.4
THBS3P49746 MIR6854-201ENST00000614935 69 ntBASIC0.09□□□□□ -2.4
THBS3P49746 U2.18-201ENST00000622185 84 ntBASIC0.09□□□□□ -2.4
THBS3P49746 RNU6-46P-201ENST00000383860 107 ntBASIC0.08□□□□□ -2.4
THBS3P49746 RNU6-901P-201ENST00000384593 106 ntBASIC0.08□□□□□ -2.4
THBS3P49746 RNU6-696P-201ENST00000390834 107 ntBASIC0.08□□□□□ -2.4
THBS3P49746 HAR1A.1-201ENST00000459583 118 ntBASIC0.08□□□□□ -2.4
THBS3P49746 U7.5-201ENST00000517224 61 ntBASIC0.08□□□□□ -2.4
THBS3P49746 Y_RNA.722-201ENST00000517279 114 ntBASIC0.08□□□□□ -2.4
THBS3P49746 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.08□□□□□ -2.4
THBS3P49746 MIR6086-201ENST00000638065 55 ntBASIC0.08□□□□□ -2.4
THBS3P49746 RNU6-936P-201ENST00000384005 107 ntBASIC0.07□□□□□ -2.4
THBS3P49746 Y_RNA.613-201ENST00000410726 97 ntBASIC0.07□□□□□ -2.4
THBS3P49746 AC114755.3-201ENST00000481111 251 ntBASIC0.07□□□□□ -2.4
THBS3P49746 MIR5190-201ENST00000581537 80 ntBASIC0.07□□□□□ -2.4
THBS3P49746 MIR4280-201ENST00000582178 76 ntBASIC0.07□□□□□ -2.4
THBS3P49746 MIR4636-201ENST00000582271 80 ntBASIC0.07□□□□□ -2.4
THBS3P49746 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
THBS3P49746 RNU6-924P-201ENST00000362926 108 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms