Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 SNORD126-201ENST00000459475 77 ntBASIC-0.4□□□□□ -2.47
HNF4AP41235 MIR4493-201ENST00000584016 73 ntBASIC-0.4□□□□□ -2.47
HNF4AP41235 MIR101-1-201ENST00000362265 75 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 SNORA62.4-201ENST00000365504 151 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 SNORA32.3-201ENST00000384772 121 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 MIR548C-201ENST00000384815 97 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 AL021921.1-201ENST00000442774 93 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 RNU6-857P-201ENST00000515893 110 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 RNU7-154P-201ENST00000516194 62 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 U7.4-201ENST00000614961 63 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 MIR6888-201ENST00000621977 67 ntBASIC-0.41□□□□□ -2.48
HNF4AP41235 MIR204-201ENST00000385200 110 ntBASIC-0.42□□□□□ -2.48
HNF4AP41235 RNU6-587P-201ENST00000391282 106 ntBASIC-0.42□□□□□ -2.48
HNF4AP41235 RNU6-279P-201ENST00000391297 101 ntBASIC-0.42□□□□□ -2.48
HNF4AP41235 RNA5SP225-201ENST00000410874 135 ntBASIC-0.42□□□□□ -2.48
HNF4AP41235 RNU6-687P-201ENST00000516443 89 ntBASIC-0.42□□□□□ -2.48
HNF4AP41235 RNA5SP395-201ENST00000516567 118 ntBASIC-0.42□□□□□ -2.48
HNF4AP41235 SNORD115-31-201ENST00000365318 82 ntBASIC-0.43□□□□□ -2.48
HNF4AP41235 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.43□□□□□ -2.48
HNF4AP41235 MIR518B-201ENST00000385127 83 ntBASIC-0.43□□□□□ -2.48
HNF4AP41235 MIR154-201ENST00000385243 84 ntBASIC-0.43□□□□□ -2.48
HNF4AP41235 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.43□□□□□ -2.48
HNF4AP41235 MIR548AG1-201ENST00000579932 66 ntBASIC-0.43□□□□□ -2.48
HNF4AP41235 AL445584.3-201ENST00000617173 78 ntBASIC-0.43□□□□□ -2.48
HNF4AP41235 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.43□□□□□ -2.48
HNF4AP41235 RNU6-24P-201ENST00000384440 107 ntBASIC-0.44□□□□□ -2.48
HNF4AP41235 MIR604-201ENST00000384880 94 ntBASIC-0.44□□□□□ -2.48
HNF4AP41235 MIR124-2-201ENST00000385081 109 ntBASIC-0.44□□□□□ -2.48
HNF4AP41235 MTND4LP1-201ENST00000446263 157 ntBASIC-0.44□□□□□ -2.48
HNF4AP41235 RNU7-174P-201ENST00000516248 59 ntBASIC-0.44□□□□□ -2.48
HNF4AP41235 MIR4436A-201ENST00000585278 85 ntBASIC-0.44□□□□□ -2.48
HNF4AP41235 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.44□□□□□ -2.48
HNF4AP41235 RNU6-758P-201ENST00000516292 89 ntBASIC-0.45□□□□□ -2.48
HNF4AP41235 SNORD22.1-201ENST00000516331 125 ntBASIC-0.45□□□□□ -2.48
HNF4AP41235 RNU6-668P-201ENST00000364180 107 ntBASIC-0.46□□□□□ -2.48
HNF4AP41235 SNORD74.6-201ENST00000364796 70 ntBASIC-0.46□□□□□ -2.48
HNF4AP41235 RNU6-411P-201ENST00000384451 107 ntBASIC-0.46□□□□□ -2.48
HNF4AP41235 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
HNF4AP41235 SNORD116-24-201ENST00000384549 92 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 MIR517B-201ENST00000385102 67 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 RNU6-721P-201ENST00000410155 105 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 RNA5SP451-201ENST00000410588 110 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 MIR3179-1-201ENST00000578940 84 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 MIR3179-2-201ENST00000579107 84 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 MIR3179-3-201ENST00000579566 84 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 AC108676.2-201ENST00000605225 163 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 MIR3179-4-201ENST00000617599 84 ntBASIC-0.47□□□□□ -2.48
HNF4AP41235 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.48□□□□□ -2.49
HNF4AP41235 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.48□□□□□ -2.49
HNF4AP41235 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.48□□□□□ -2.49
HNF4AP41235 SNORA13-201ENST00000458790 133 ntBASIC-0.48□□□□□ -2.49
HNF4AP41235 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
HNF4AP41235 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.49□□□□□ -2.49
HNF4AP41235 RNU6-895P-201ENST00000384125 103 ntBASIC-0.49□□□□□ -2.49
HNF4AP41235 RNU6-523P-201ENST00000516304 54 ntBASIC-0.49□□□□□ -2.49
HNF4AP41235 MIR6086-201ENST00000638065 55 ntBASIC-0.49□□□□□ -2.49
HNF4AP41235 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.5□□□□□ -2.49
HNF4AP41235 SNORA3B-201ENST00000391305 131 ntBASIC-0.5□□□□□ -2.49
HNF4AP41235 SNORD18.2-201ENST00000459604 70 ntBASIC-0.5□□□□□ -2.49
HNF4AP41235 MIR548V-201ENST00000584165 80 ntBASIC-0.5□□□□□ -2.49
HNF4AP41235 U4.4-201ENST00000620626 117 ntBASIC-0.5□□□□□ -2.49
HNF4AP41235 RNA5SP215-201ENST00000363440 122 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 RNU6-698P-201ENST00000363523 107 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 RNU6-34P-201ENST00000364874 107 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 MIR630-201ENST00000384957 97 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 MIR889-201ENST00000401280 79 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 SNORD75.1-201ENST00000408373 60 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 Z95118.1-201ENST00000421372 247 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 AP000533.3-201ENST00000447704 118 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.51□□□□□ -2.49
HNF4AP41235 SNORD114-14-201ENST00000362723 75 ntBASIC-0.52□□□□□ -2.49
HNF4AP41235 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.52□□□□□ -2.49
HNF4AP41235 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.52□□□□□ -2.49
HNF4AP41235 MIR224-201ENST00000384889 81 ntBASIC-0.52□□□□□ -2.49
HNF4AP41235 AC021146.6-201ENST00000514659 117 ntBASIC-0.52□□□□□ -2.49
HNF4AP41235 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.53□□□□□ -2.49
HNF4AP41235 RPS29P8-201ENST00000445109 171 ntBASIC-0.53□□□□□ -2.49
HNF4AP41235 RNU6-634P-201ENST00000459134 106 ntBASIC-0.53□□□□□ -2.49
HNF4AP41235 RNU6-924P-201ENST00000362926 108 ntBASIC-0.54□□□□□ -2.5
HNF4AP41235 RNU6-30P-201ENST00000384561 107 ntBASIC-0.54□□□□□ -2.5
HNF4AP41235 RNU6-540P-201ENST00000384622 101 ntBASIC-0.54□□□□□ -2.5
HNF4AP41235 RNU6-246P-201ENST00000384702 107 ntBASIC-0.54□□□□□ -2.5
HNF4AP41235 SNORA72.7-201ENST00000516349 94 ntBASIC-0.54□□□□□ -2.5
HNF4AP41235 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.55□□□□□ -2.5
HNF4AP41235 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.55□□□□□ -2.5
HNF4AP41235 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.55□□□□□ -2.5
HNF4AP41235 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.55□□□□□ -2.5
HNF4AP41235 RNU4-63P-201ENST00000411313 118 ntBASIC-0.55□□□□□ -2.5
HNF4AP41235 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.56□□□□□ -2.5
HNF4AP41235 SNORD95.1-201ENST00000364099 68 ntBASIC-0.57□□□□□ -2.5
HNF4AP41235 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.57□□□□□ -2.5
HNF4AP41235 MIR527-201ENST00000385244 85 ntBASIC-0.58□□□□□ -2.5
HNF4AP41235 SNORD113-2-201ENST00000391082 72 ntBASIC-0.58□□□□□ -2.5
HNF4AP41235 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.58□□□□□ -2.5
HNF4AP41235 RNA5SP25-201ENST00000410815 110 ntBASIC-0.58□□□□□ -2.5
HNF4AP41235 U7.5-201ENST00000517224 61 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 331 ms