Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.15□□□□□ -2.43
TIMP3P35625 SNORD116-24-201ENST00000384549 92 ntBASIC-0.16□□□□□ -2.44
TIMP3P35625 RNU6-540P-201ENST00000384622 101 ntBASIC-0.16□□□□□ -2.44
TIMP3P35625 MIR519A2-201ENST00000384990 87 ntBASIC-0.16□□□□□ -2.44
TIMP3P35625 AC096531.1-201ENST00000419107 107 ntBASIC-0.16□□□□□ -2.44
TIMP3P35625 AL353803.5-201ENST00000599815 141 ntBASIC-0.16□□□□□ -2.44
TIMP3P35625 MIR3666-201ENST00000607845 111 ntBASIC-0.16□□□□□ -2.44
TIMP3P35625 MIR6086-201ENST00000638065 55 ntBASIC-0.16□□□□□ -2.44
TIMP3P35625 SNORD114-31-201ENST00000363219 75 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 RNA5SP215-201ENST00000363440 122 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 SNORD56B-201ENST00000384713 71 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 MIR517B-201ENST00000385102 67 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 RNU6-663P-201ENST00000391105 106 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 MIR1265-201ENST00000408444 86 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 AL445193.1-201ENST00000441183 141 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 RNU7-154P-201ENST00000516194 62 ntBASIC-0.17□□□□□ -2.44
TIMP3P35625 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.18□□□□□ -2.44
TIMP3P35625 SNORD30.1-201ENST00000391309 70 ntBASIC-0.18□□□□□ -2.44
TIMP3P35625 HAR1A.1-201ENST00000459583 118 ntBASIC-0.18□□□□□ -2.44
TIMP3P35625 RNU7-174P-201ENST00000516248 59 ntBASIC-0.18□□□□□ -2.44
TIMP3P35625 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
TIMP3P35625 SNORA62.4-201ENST00000365504 151 ntBASIC-0.19□□□□□ -2.44
TIMP3P35625 MIR548V-201ENST00000584165 80 ntBASIC-0.19□□□□□ -2.44
TIMP3P35625 AL590491.3-201ENST00000610731 82 ntBASIC-0.19□□□□□ -2.44
TIMP3P35625 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.19□□□□□ -2.44
TIMP3P35625 RNU6-649P-201ENST00000384463 107 ntBASIC-0.2□□□□□ -2.44
TIMP3P35625 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
TIMP3P35625 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.2□□□□□ -2.44
TIMP3P35625 MIR5704-201ENST00000584029 77 ntBASIC-0.2□□□□□ -2.44
TIMP3P35625 MIR4788-201ENST00000639104 80 ntBASIC-0.2□□□□□ -2.44
TIMP3P35625 RNU6-698P-201ENST00000363523 107 ntBASIC-0.21□□□□□ -2.44
TIMP3P35625 RNU6-34P-201ENST00000364874 107 ntBASIC-0.21□□□□□ -2.44
TIMP3P35625 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.21□□□□□ -2.44
TIMP3P35625 RNA5SP300-201ENST00000391197 107 ntBASIC-0.21□□□□□ -2.44
TIMP3P35625 MIR4280-201ENST00000582178 76 ntBASIC-0.21□□□□□ -2.44
TIMP3P35625 MIR6854-201ENST00000614935 69 ntBASIC-0.21□□□□□ -2.44
TIMP3P35625 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.22□□□□□ -2.44
TIMP3P35625 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.22□□□□□ -2.44
TIMP3P35625 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.22□□□□□ -2.44
TIMP3P35625 RNU6-630P-201ENST00000391258 106 ntBASIC-0.22□□□□□ -2.44
TIMP3P35625 AC093726.3-201ENST00000637588 150 ntBASIC-0.22□□□□□ -2.44
TIMP3P35625 MIR630-201ENST00000384957 97 ntBASIC-0.23□□□□□ -2.45
TIMP3P35625 MIR4645-201ENST00000583158 77 ntBASIC-0.23□□□□□ -2.45
TIMP3P35625 AP001180.6-201ENST00000584918 159 ntBASIC-0.23□□□□□ -2.45
TIMP3P35625 Z95118.1-201ENST00000421372 247 ntBASIC-0.24□□□□□ -2.45
TIMP3P35625 RNU6-542P-201ENST00000516405 103 ntBASIC-0.24□□□□□ -2.45
TIMP3P35625 RNU6-539P-201ENST00000516665 103 ntBASIC-0.24□□□□□ -2.45
TIMP3P35625 MIR4493-201ENST00000584016 73 ntBASIC-0.24□□□□□ -2.45
TIMP3P35625 MIR8064-201ENST00000612863 90 ntBASIC-0.24□□□□□ -2.45
TIMP3P35625 MIR8068-201ENST00000618032 68 ntBASIC-0.24□□□□□ -2.45
TIMP3P35625 SNORD113-2-201ENST00000391082 72 ntBASIC-0.25□□□□□ -2.45
TIMP3P35625 AC114755.3-201ENST00000481111 251 ntBASIC-0.25□□□□□ -2.45
TIMP3P35625 SNORD38.3-201ENST00000516599 73 ntBASIC-0.25□□□□□ -2.45
TIMP3P35625 MIR6851-201ENST00000617060 67 ntBASIC-0.25□□□□□ -2.45
TIMP3P35625 U6.111-201ENST00000636093 83 ntBASIC-0.25□□□□□ -2.45
TIMP3P35625 SNORA25.4-201ENST00000363666 124 ntBASIC-0.26□□□□□ -2.45
TIMP3P35625 RNU6-758P-201ENST00000516292 89 ntBASIC-0.26□□□□□ -2.45
TIMP3P35625 AC108676.2-201ENST00000605225 163 ntBASIC-0.26□□□□□ -2.45
TIMP3P35625 U4.4-201ENST00000620626 117 ntBASIC-0.26□□□□□ -2.45
TIMP3P35625 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.27□□□□□ -2.45
TIMP3P35625 SNORD114-11-201ENST00000363738 75 ntBASIC-0.27□□□□□ -2.45
TIMP3P35625 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.27□□□□□ -2.45
TIMP3P35625 MIR204-201ENST00000385200 110 ntBASIC-0.27□□□□□ -2.45
TIMP3P35625 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.27□□□□□ -2.45
TIMP3P35625 RNU6-320P-201ENST00000516511 106 ntBASIC-0.27□□□□□ -2.45
TIMP3P35625 MIR4464-201ENST00000580818 92 ntBASIC-0.27□□□□□ -2.45
TIMP3P35625 MIR6888-201ENST00000621977 67 ntBASIC-0.27□□□□□ -2.45
TIMP3P35625 SNORD114-28-201ENST00000363610 72 ntBASIC-0.28□□□□□ -2.45
TIMP3P35625 RNA5SP275-201ENST00000363936 118 ntBASIC-0.28□□□□□ -2.45
TIMP3P35625 AC114801.3-201ENST00000510231 177 ntBASIC-0.28□□□□□ -2.45
TIMP3P35625 AL445584.3-201ENST00000617173 78 ntBASIC-0.28□□□□□ -2.45
TIMP3P35625 MIR124-2-201ENST00000385081 109 ntBASIC-0.29□□□□□ -2.46
TIMP3P35625 MIR518B-201ENST00000385127 83 ntBASIC-0.29□□□□□ -2.46
TIMP3P35625 MIR527-201ENST00000385244 85 ntBASIC-0.29□□□□□ -2.46
TIMP3P35625 RNA5SP25-201ENST00000410815 110 ntBASIC-0.29□□□□□ -2.46
TIMP3P35625 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.29□□□□□ -2.46
TIMP3P35625 MIR548AG1-201ENST00000579932 66 ntBASIC-0.29□□□□□ -2.46
TIMP3P35625 AC005520.4-201ENST00000604337 90 ntBASIC-0.29□□□□□ -2.46
TIMP3P35625 MIR101-1-201ENST00000362265 75 ntBASIC-0.3□□□□□ -2.46
TIMP3P35625 RNU6-800P-201ENST00000384473 103 ntBASIC-0.3□□□□□ -2.46
TIMP3P35625 MIR604-201ENST00000384880 94 ntBASIC-0.3□□□□□ -2.46
TIMP3P35625 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.3□□□□□ -2.46
TIMP3P35625 SNORD74.6-201ENST00000364796 70 ntBASIC-0.31□□□□□ -2.46
TIMP3P35625 RNU6-924P-201ENST00000362926 108 ntBASIC-0.32□□□□□ -2.46
TIMP3P35625 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.32□□□□□ -2.46
TIMP3P35625 MIR196A2-201ENST00000385189 110 ntBASIC-0.32□□□□□ -2.46
TIMP3P35625 SNORA13-201ENST00000458790 133 ntBASIC-0.32□□□□□ -2.46
TIMP3P35625 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.32□□□□□ -2.46
TIMP3P35625 MIR429-201ENST00000362106 83 ntBASIC-0.33□□□□□ -2.46
TIMP3P35625 RNA5SP169-201ENST00000517268 117 ntBASIC-0.33□□□□□ -2.46
TIMP3P35625 MIR548AZ-201ENST00000616567 95 ntBASIC-0.33□□□□□ -2.46
TIMP3P35625 RNA5SP368-201ENST00000364298 116 ntBASIC-0.34□□□□□ -2.46
TIMP3P35625 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.34□□□□□ -2.46
TIMP3P35625 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
TIMP3P35625 snoU13.19-201ENST00000459148 104 ntBASIC-0.34□□□□□ -2.46
TIMP3P35625 SNORD18.2-201ENST00000459604 70 ntBASIC-0.34□□□□□ -2.46
TIMP3P35625 SNORD22.1-201ENST00000516331 125 ntBASIC-0.34□□□□□ -2.46
TIMP3P35625 RNU6-92P-201ENST00000605893 104 ntBASIC-0.34□□□□□ -2.46
TIMP3P35625 SNORD14C-201ENST00000365382 88 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 234.6 ms