Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNA5SP193-201ENST00000410353 107 ntBASIC0.61□□□□□ -2.31
CLCN1P35523 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
CLCN1P35523 AC090625.1-201ENST00000357130 210 ntBASIC0.6□□□□□ -2.31
CLCN1P35523 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
CLCN1P35523 SNORD113-4-201ENST00000364802 75 ntBASIC0.6□□□□□ -2.31
CLCN1P35523 Y_RNA.109-201ENST00000363215 102 ntBASIC0.59□□□□□ -2.31
CLCN1P35523 RNU6-458P-201ENST00000384179 107 ntBASIC0.59□□□□□ -2.31
CLCN1P35523 SNORD116.2-201ENST00000391251 93 ntBASIC0.59□□□□□ -2.31
CLCN1P35523 U6.58-201ENST00000613107 107 ntBASIC0.59□□□□□ -2.31
CLCN1P35523 RNU6-1312P-201ENST00000362425 108 ntBASIC0.58□□□□□ -2.32
CLCN1P35523 RNA5SP163-201ENST00000410304 99 ntBASIC0.58□□□□□ -2.32
CLCN1P35523 MIR4432-201ENST00000581823 84 ntBASIC0.58□□□□□ -2.32
CLCN1P35523 RNU6-1327P-201ENST00000365302 105 ntBASIC0.57□□□□□ -2.32
CLCN1P35523 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.57□□□□□ -2.32
CLCN1P35523 uc_338.36-201ENST00000622331 158 ntBASIC0.57□□□□□ -2.32
CLCN1P35523 RNU6-1133P-201ENST00000410963 100 ntBASIC0.56□□□□□ -2.32
CLCN1P35523 MIR7110-201ENST00000612638 86 ntBASIC0.56□□□□□ -2.32
CLCN1P35523 CR383656.4-201ENST00000546909 122 ntBASIC0.55□□□□□ -2.32
CLCN1P35523 MIR7978-201ENST00000636158 59 ntBASIC0.54□□□□□ -2.32
CLCN1P35523 MIR892B-201ENST00000401279 77 ntBASIC0.53□□□□□ -2.32
CLCN1P35523 SNORA62.5-201ENST00000516634 120 ntBASIC0.53□□□□□ -2.32
CLCN1P35523 Y_RNA.722-201ENST00000517279 114 ntBASIC0.53□□□□□ -2.32
CLCN1P35523 AL391099.1-201ENST00000624635 187 ntBASIC0.53□□□□□ -2.32
CLCN1P35523 SNORD1B-201ENST00000363091 84 ntBASIC0.52□□□□□ -2.33
CLCN1P35523 RNU6-35P-201ENST00000384530 107 ntBASIC0.52□□□□□ -2.33
CLCN1P35523 RNA5SP476-201ENST00000516613 103 ntBASIC0.52□□□□□ -2.33
CLCN1P35523 AC108676.2-201ENST00000605225 163 ntBASIC0.52□□□□□ -2.33
CLCN1P35523 MIR610-201ENST00000385139 96 ntBASIC0.51□□□□□ -2.33
CLCN1P35523 MIR4315-1-201ENST00000636800 73 ntBASIC0.51□□□□□ -2.33
CLCN1P35523 MIR4315-2-201ENST00000640925 73 ntBASIC0.51□□□□□ -2.33
CLCN1P35523 RNU6-936P-201ENST00000384005 107 ntBASIC0.5□□□□□ -2.33
CLCN1P35523 RNU6-455P-201ENST00000384681 107 ntBASIC0.5□□□□□ -2.33
CLCN1P35523 MIR548H2-201ENST00000408874 88 ntBASIC0.5□□□□□ -2.33
CLCN1P35523 RNU6-172P-201ENST00000411000 93 ntBASIC0.5□□□□□ -2.33
CLCN1P35523 RNU7-55P-201ENST00000459426 62 ntBASIC0.5□□□□□ -2.33
CLCN1P35523 RNU6-180P-201ENST00000516697 61 ntBASIC0.5□□□□□ -2.33
CLCN1P35523 MIR148A-201ENST00000362215 68 ntBASIC0.49□□□□□ -2.33
CLCN1P35523 RNU6-900P-201ENST00000384498 102 ntBASIC0.49□□□□□ -2.33
CLCN1P35523 MIR593-201ENST00000384856 100 ntBASIC0.49□□□□□ -2.33
CLCN1P35523 HAR1A.1-201ENST00000459583 118 ntBASIC0.48□□□□□ -2.33
CLCN1P35523 RNU6-973P-201ENST00000364690 107 ntBASIC0.47□□□□□ -2.33
CLCN1P35523 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
CLCN1P35523 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CLCN1P35523 MIR4514-201ENST00000581410 57 ntBASIC0.47□□□□□ -2.33
CLCN1P35523 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CLCN1P35523 SNORA62.4-201ENST00000365504 151 ntBASIC0.46□□□□□ -2.34
CLCN1P35523 RNU6-808P-201ENST00000391233 108 ntBASIC0.46□□□□□ -2.34
CLCN1P35523 AC104408.1-201ENST00000605241 170 ntBASIC0.45□□□□□ -2.34
CLCN1P35523 MIR6507-201ENST00000613630 70 ntBASIC0.45□□□□□ -2.34
CLCN1P35523 MIR2909-201ENST00000617113 69 ntBASIC0.45□□□□□ -2.34
CLCN1P35523 RNA5SP134-201ENST00000516492 96 ntBASIC0.44□□□□□ -2.34
CLCN1P35523 SNORA40.16-201ENST00000517238 121 ntBASIC0.44□□□□□ -2.34
CLCN1P35523 RNU6-810P-201ENST00000364001 107 ntBASIC0.43□□□□□ -2.34
CLCN1P35523 RNA5SP63-201ENST00000391225 112 ntBASIC0.43□□□□□ -2.34
CLCN1P35523 RNA5SP285-201ENST00000516619 119 ntBASIC0.43□□□□□ -2.34
CLCN1P35523 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
CLCN1P35523 Y_RNA.698-201ENST00000516798 118 ntBASIC0.42□□□□□ -2.34
CLCN1P35523 MIR6086-201ENST00000638065 55 ntBASIC0.42□□□□□ -2.34
CLCN1P35523 RNU6-598P-201ENST00000364017 105 ntBASIC0.41□□□□□ -2.34
CLCN1P35523 SNORA40B-201ENST00000385573 128 ntBASIC0.41□□□□□ -2.34
CLCN1P35523 MIR4743-201ENST00000584576 69 ntBASIC0.41□□□□□ -2.34
CLCN1P35523 MIR6888-201ENST00000621977 67 ntBASIC0.41□□□□□ -2.34
CLCN1P35523 RNU6-1184P-201ENST00000384588 108 ntBASIC0.4□□□□□ -2.35
CLCN1P35523 MIR145-201ENST00000384967 88 ntBASIC0.4□□□□□ -2.35
CLCN1P35523 AC096531.1-201ENST00000419107 107 ntBASIC0.4□□□□□ -2.35
CLCN1P35523 RNU7-159P-201ENST00000459284 62 ntBASIC0.4□□□□□ -2.35
CLCN1P35523 RNA5SP214-201ENST00000363378 118 ntBASIC0.39□□□□□ -2.35
CLCN1P35523 RNU6-901P-201ENST00000384593 106 ntBASIC0.39□□□□□ -2.35
CLCN1P35523 MIR4464-201ENST00000580818 92 ntBASIC0.39□□□□□ -2.35
CLCN1P35523 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
CLCN1P35523 AL445584.3-201ENST00000617173 78 ntBASIC0.38□□□□□ -2.35
CLCN1P35523 U2.18-201ENST00000622185 84 ntBASIC0.38□□□□□ -2.35
CLCN1P35523 SNORA42.1-201ENST00000363515 137 ntBASIC0.36□□□□□ -2.35
CLCN1P35523 RNU7-165P-201ENST00000458864 60 ntBASIC0.36□□□□□ -2.35
CLCN1P35523 MIR5704-201ENST00000584029 77 ntBASIC0.36□□□□□ -2.35
CLCN1P35523 MIR579-201ENST00000385221 98 ntBASIC0.35□□□□□ -2.35
CLCN1P35523 RNU7-88P-201ENST00000458752 63 ntBASIC0.35□□□□□ -2.35
CLCN1P35523 RNU6-696P-201ENST00000390834 107 ntBASIC0.34□□□□□ -2.36
CLCN1P35523 AC244250.2-201ENST00000418731 148 ntBASIC0.34□□□□□ -2.36
CLCN1P35523 RNU6-1262P-201ENST00000516217 96 ntBASIC0.34□□□□□ -2.36
CLCN1P35523 U7.5-201ENST00000517224 61 ntBASIC0.34□□□□□ -2.36
CLCN1P35523 SNORD114-5-201ENST00000362928 70 ntBASIC0.33□□□□□ -2.36
CLCN1P35523 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.33□□□□□ -2.36
CLCN1P35523 SNORD114-9-201ENST00000364370 72 ntBASIC0.31□□□□□ -2.36
CLCN1P35523 RNU7-151P-201ENST00000516930 53 ntBASIC0.31□□□□□ -2.36
CLCN1P35523 MIR5093-201ENST00000583199 100 ntBASIC0.31□□□□□ -2.36
CLCN1P35523 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.31□□□□□ -2.36
CLCN1P35523 MIR6854-201ENST00000614935 69 ntBASIC0.31□□□□□ -2.36
CLCN1P35523 MIR329-2-201ENST00000385029 84 ntBASIC0.3□□□□□ -2.36
CLCN1P35523 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CLCN1P35523 RNU6-924P-201ENST00000362926 108 ntBASIC0.29□□□□□ -2.36
CLCN1P35523 RNU6-995P-201ENST00000391244 107 ntBASIC0.29□□□□□ -2.36
CLCN1P35523 MIR4490-201ENST00000582647 84 ntBASIC0.29□□□□□ -2.36
CLCN1P35523 MIR8068-201ENST00000618032 68 ntBASIC0.29□□□□□ -2.36
CLCN1P35523 SNORD56B-201ENST00000384713 71 ntBASIC0.28□□□□□ -2.36
CLCN1P35523 MIR548AA1-201ENST00000384971 97 ntBASIC0.28□□□□□ -2.36
CLCN1P35523 MIR4636-201ENST00000582271 80 ntBASIC0.27□□□□□ -2.37
CLCN1P35523 MIR6759-201ENST00000638110 65 ntBASIC0.27□□□□□ -2.37
CLCN1P35523 Y_RNA.379-201ENST00000365653 102 ntBASIC0.26□□□□□ -2.37
CLCN1P35523 AL445193.1-201ENST00000441183 141 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms