Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.22□□□□□ -2.44
CD40P25942 RNU6-871P-201ENST00000516122 100 ntBASIC-0.22□□□□□ -2.44
CD40P25942 RNA5SP470-201ENST00000516463 106 ntBASIC-0.22□□□□□ -2.44
CD40P25942 SNORD38.3-201ENST00000516599 73 ntBASIC-0.22□□□□□ -2.44
CD40P25942 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
CD40P25942 AL021921.1-201ENST00000442774 93 ntBASIC-0.23□□□□□ -2.45
CD40P25942 AL353803.5-201ENST00000599815 141 ntBASIC-0.23□□□□□ -2.45
CD40P25942 SNORD116-24-201ENST00000384549 92 ntBASIC-0.24□□□□□ -2.45
CD40P25942 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.24□□□□□ -2.45
CD40P25942 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.24□□□□□ -2.45
CD40P25942 RNA5SP66-201ENST00000517178 101 ntBASIC-0.24□□□□□ -2.45
CD40P25942 MIR4263-201ENST00000584745 83 ntBASIC-0.24□□□□□ -2.45
CD40P25942 MIR6759-201ENST00000638110 65 ntBASIC-0.24□□□□□ -2.45
CD40P25942 RNU6-540P-201ENST00000384622 101 ntBASIC-0.25□□□□□ -2.45
CD40P25942 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.25□□□□□ -2.45
CD40P25942 MIR6851-201ENST00000617060 67 ntBASIC-0.25□□□□□ -2.45
CD40P25942 MIR6888-201ENST00000621977 67 ntBASIC-0.25□□□□□ -2.45
CD40P25942 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.26□□□□□ -2.45
CD40P25942 MIR6854-201ENST00000614935 69 ntBASIC-0.26□□□□□ -2.45
CD40P25942 RNU6-302P-201ENST00000365249 107 ntBASIC-0.27□□□□□ -2.45
CD40P25942 RNU7-174P-201ENST00000516248 59 ntBASIC-0.27□□□□□ -2.45
CD40P25942 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.28□□□□□ -2.45
CD40P25942 MIR517B-201ENST00000385102 67 ntBASIC-0.28□□□□□ -2.45
CD40P25942 RNU6-663P-201ENST00000391105 106 ntBASIC-0.28□□□□□ -2.45
CD40P25942 RNU7-154P-201ENST00000516194 62 ntBASIC-0.28□□□□□ -2.45
CD40P25942 MIR548V-201ENST00000584165 80 ntBASIC-0.28□□□□□ -2.45
CD40P25942 RNA5SP215-201ENST00000363440 122 ntBASIC-0.29□□□□□ -2.46
CD40P25942 SNORD30.1-201ENST00000391309 70 ntBASIC-0.29□□□□□ -2.46
CD40P25942 AL445584.3-201ENST00000617173 78 ntBASIC-0.29□□□□□ -2.46
CD40P25942 U4.4-201ENST00000620626 117 ntBASIC-0.29□□□□□ -2.46
CD40P25942 AC093726.3-201ENST00000637588 150 ntBASIC-0.29□□□□□ -2.46
CD40P25942 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.3□□□□□ -2.46
CD40P25942 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
CD40P25942 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.31□□□□□ -2.46
CD40P25942 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.32□□□□□ -2.46
CD40P25942 MIR124-2-201ENST00000385081 109 ntBASIC-0.32□□□□□ -2.46
CD40P25942 MIR196A2-201ENST00000385189 110 ntBASIC-0.32□□□□□ -2.46
CD40P25942 RNU6-721P-201ENST00000410155 105 ntBASIC-0.32□□□□□ -2.46
CD40P25942 SNORD22.1-201ENST00000516331 125 ntBASIC-0.32□□□□□ -2.46
CD40P25942 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.32□□□□□ -2.46
CD40P25942 SNORA62.4-201ENST00000365504 151 ntBASIC-0.33□□□□□ -2.46
CD40P25942 RNU6-246P-201ENST00000384702 107 ntBASIC-0.33□□□□□ -2.46
CD40P25942 MIR630-201ENST00000384957 97 ntBASIC-0.33□□□□□ -2.46
CD40P25942 SNORD126-201ENST00000459475 77 ntBASIC-0.33□□□□□ -2.46
CD40P25942 RNU6-649P-201ENST00000384463 107 ntBASIC-0.34□□□□□ -2.46
CD40P25942 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
CD40P25942 IGLVI-20-201ENST00000519296 130 ntBASIC-0.34□□□□□ -2.46
CD40P25942 MIR4436A-201ENST00000585278 85 ntBASIC-0.34□□□□□ -2.46
CD40P25942 RNU6-698P-201ENST00000363523 107 ntBASIC-0.35□□□□□ -2.47
CD40P25942 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.35□□□□□ -2.47
CD40P25942 RNU6-34P-201ENST00000364874 107 ntBASIC-0.35□□□□□ -2.47
CD40P25942 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.35□□□□□ -2.47
CD40P25942 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.35□□□□□ -2.47
CD40P25942 AC108676.2-201ENST00000605225 163 ntBASIC-0.35□□□□□ -2.47
CD40P25942 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.36□□□□□ -2.47
CD40P25942 MIR518B-201ENST00000385127 83 ntBASIC-0.36□□□□□ -2.47
CD40P25942 RNU6-630P-201ENST00000391258 106 ntBASIC-0.36□□□□□ -2.47
CD40P25942 RNU6-284P-201ENST00000411105 106 ntBASIC-0.36□□□□□ -2.47
CD40P25942 SNORD114-31-201ENST00000363219 75 ntBASIC-0.37□□□□□ -2.47
CD40P25942 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.37□□□□□ -2.47
CD40P25942 SNORD14C-201ENST00000365382 88 ntBASIC-0.37□□□□□ -2.47
CD40P25942 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.37□□□□□ -2.47
CD40P25942 MIR3179-1-201ENST00000578940 84 ntBASIC-0.37□□□□□ -2.47
CD40P25942 MIR3179-2-201ENST00000579107 84 ntBASIC-0.37□□□□□ -2.47
CD40P25942 MIR3179-3-201ENST00000579566 84 ntBASIC-0.37□□□□□ -2.47
CD40P25942 MIR3179-4-201ENST00000617599 84 ntBASIC-0.37□□□□□ -2.47
CD40P25942 RNA5SP275-201ENST00000363936 118 ntBASIC-0.38□□□□□ -2.47
CD40P25942 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.38□□□□□ -2.47
CD40P25942 MIR204-201ENST00000385200 110 ntBASIC-0.38□□□□□ -2.47
CD40P25942 SNORD75.1-201ENST00000408373 60 ntBASIC-0.38□□□□□ -2.47
CD40P25942 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.39□□□□□ -2.47
CD40P25942 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.39□□□□□ -2.47
CD40P25942 SNORA41B-201ENST00000384785 128 ntBASIC-0.39□□□□□ -2.47
CD40P25942 SNORD113-2-201ENST00000391082 72 ntBASIC-0.39□□□□□ -2.47
CD40P25942 SNORA3B-201ENST00000391305 131 ntBASIC-0.39□□□□□ -2.47
CD40P25942 AP000533.3-201ENST00000447704 118 ntBASIC-0.39□□□□□ -2.47
CD40P25942 MIR4802-201ENST00000581881 80 ntBASIC-0.39□□□□□ -2.47
CD40P25942 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.4□□□□□ -2.47
CD40P25942 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.4□□□□□ -2.47
CD40P25942 RNU7-88P-201ENST00000458752 63 ntBASIC-0.4□□□□□ -2.47
CD40P25942 SNORD18.2-201ENST00000459604 70 ntBASIC-0.4□□□□□ -2.47
CD40P25942 RNU6-539P-201ENST00000516665 103 ntBASIC-0.4□□□□□ -2.47
CD40P25942 MIR5589-201ENST00000579442 60 ntBASIC-0.4□□□□□ -2.47
CD40P25942 U6.111-201ENST00000636093 83 ntBASIC-0.4□□□□□ -2.47
CD40P25942 RNU6-458P-201ENST00000384179 107 ntBASIC-0.41□□□□□ -2.48
CD40P25942 RNU6-542P-201ENST00000516405 103 ntBASIC-0.41□□□□□ -2.48
CD40P25942 U7.5-201ENST00000517224 61 ntBASIC-0.41□□□□□ -2.48
CD40P25942 U6.58-201ENST00000613107 107 ntBASIC-0.41□□□□□ -2.48
CD40P25942 SNORA25.4-201ENST00000363666 124 ntBASIC-0.42□□□□□ -2.48
CD40P25942 SNORD74.6-201ENST00000364796 70 ntBASIC-0.42□□□□□ -2.48
CD40P25942 MIR4636-201ENST00000582271 80 ntBASIC-0.42□□□□□ -2.48
CD40P25942 MIR4645-201ENST00000583158 77 ntBASIC-0.42□□□□□ -2.48
CD40P25942 MIR527-201ENST00000385244 85 ntBASIC-0.43□□□□□ -2.48
CD40P25942 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
CD40P25942 SNORD114-14-201ENST00000362723 75 ntBASIC-0.44□□□□□ -2.48
CD40P25942 SNORD114-17-201ENST00000364699 75 ntBASIC-0.44□□□□□ -2.48
CD40P25942 RNU6-35P-201ENST00000384530 107 ntBASIC-0.44□□□□□ -2.48
CD40P25942 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
CD40P25942 AC005520.4-201ENST00000604337 90 ntBASIC-0.44□□□□□ -2.48
CD40P25942 RNU6-924P-201ENST00000362926 108 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms