Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC090625.1-201ENST00000357130 210 ntBASIC0.8□□□□□ -2.28
CHGAP10645 MIR548AG1-201ENST00000579932 66 ntBASIC0.8□□□□□ -2.28
CHGAP10645 MIR5087-201ENST00000635826 76 ntBASIC0.8□□□□□ -2.28
CHGAP10645 RNA5SP285-201ENST00000516619 119 ntBASIC0.79□□□□□ -2.28
CHGAP10645 AC069113.3-201ENST00000521019 150 ntBASIC0.79□□□□□ -2.28
CHGAP10645 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.78□□□□□ -2.28
CHGAP10645 Y_RNA.722-201ENST00000517279 114 ntBASIC0.77□□□□□ -2.29
CHGAP10645 snoR1.1-201ENST00000628177 80 ntBASIC0.77□□□□□ -2.29
CHGAP10645 MIR4514-201ENST00000581410 57 ntBASIC0.76□□□□□ -2.29
CHGAP10645 MIR7110-201ENST00000612638 86 ntBASIC0.75□□□□□ -2.29
CHGAP10645 Y_RNA.109-201ENST00000363215 102 ntBASIC0.74□□□□□ -2.29
CHGAP10645 MIR92A1-201ENST00000385233 78 ntBASIC0.74□□□□□ -2.29
CHGAP10645 RNU6-808P-201ENST00000391233 108 ntBASIC0.74□□□□□ -2.29
CHGAP10645 RNU6-1327P-201ENST00000365302 105 ntBASIC0.73□□□□□ -2.29
CHGAP10645 VTRNA1-3-201ENST00000365645 89 ntBASIC0.73□□□□□ -2.29
CHGAP10645 RNU6-458P-201ENST00000384179 107 ntBASIC0.73□□□□□ -2.29
CHGAP10645 MIR4432-201ENST00000581823 84 ntBASIC0.73□□□□□ -2.29
CHGAP10645 U6.58-201ENST00000613107 107 ntBASIC0.73□□□□□ -2.29
CHGAP10645 MIR7978-201ENST00000636158 59 ntBASIC0.73□□□□□ -2.29
CHGAP10645 RNU6-1312P-201ENST00000362425 108 ntBASIC0.72□□□□□ -2.29
CHGAP10645 MIR643-201ENST00000385267 97 ntBASIC0.72□□□□□ -2.29
CHGAP10645 MIR892B-201ENST00000401279 77 ntBASIC0.72□□□□□ -2.29
CHGAP10645 AC114737.2-201ENST00000421583 173 ntBASIC0.72□□□□□ -2.29
CHGAP10645 CR383656.4-201ENST00000546909 122 ntBASIC0.72□□□□□ -2.29
CHGAP10645 MIR6514-201ENST00000622549 70 ntBASIC0.72□□□□□ -2.29
CHGAP10645 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
CHGAP10645 SNORA62.5-201ENST00000516634 120 ntBASIC0.71□□□□□ -2.3
CHGAP10645 RNA5SP63-201ENST00000391225 112 ntBASIC0.7□□□□□ -2.3
CHGAP10645 SNORD116.2-201ENST00000391251 93 ntBASIC0.7□□□□□ -2.3
CHGAP10645 RNU7-55P-201ENST00000459426 62 ntBASIC0.68□□□□□ -2.3
CHGAP10645 SNORD1B-201ENST00000363091 84 ntBASIC0.67□□□□□ -2.3
CHGAP10645 MIR4315-1-201ENST00000636800 73 ntBASIC0.67□□□□□ -2.3
CHGAP10645 MIR4315-2-201ENST00000640925 73 ntBASIC0.67□□□□□ -2.3
CHGAP10645 MIR148A-201ENST00000362215 68 ntBASIC0.66□□□□□ -2.3
CHGAP10645 RNU6-936P-201ENST00000384005 107 ntBASIC0.66□□□□□ -2.3
CHGAP10645 RNU6-900P-201ENST00000384498 102 ntBASIC0.66□□□□□ -2.3
CHGAP10645 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.66□□□□□ -2.3
CHGAP10645 RNU6-1133P-201ENST00000410963 100 ntBASIC0.66□□□□□ -2.3
CHGAP10645 RNU6-180P-201ENST00000516697 61 ntBASIC0.66□□□□□ -2.3
CHGAP10645 AL627230.5-201ENST00000619807 58 ntBASIC0.66□□□□□ -2.3
CHGAP10645 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CHGAP10645 AC108676.2-201ENST00000605225 163 ntBASIC0.65□□□□□ -2.31
CHGAP10645 AL391099.1-201ENST00000624635 187 ntBASIC0.65□□□□□ -2.31
CHGAP10645 SNORA62.4-201ENST00000365504 151 ntBASIC0.64□□□□□ -2.31
CHGAP10645 RNU6-1184P-201ENST00000384588 108 ntBASIC0.64□□□□□ -2.31
CHGAP10645 RNA5SP163-201ENST00000410304 99 ntBASIC0.64□□□□□ -2.31
CHGAP10645 AC023932.2-201ENST00000603176 175 ntBASIC0.64□□□□□ -2.31
CHGAP10645 MIR6759-201ENST00000638110 65 ntBASIC0.64□□□□□ -2.31
CHGAP10645 RNU6-973P-201ENST00000364690 107 ntBASIC0.63□□□□□ -2.31
CHGAP10645 MIR548H2-201ENST00000408874 88 ntBASIC0.63□□□□□ -2.31
CHGAP10645 RNU6-172P-201ENST00000411000 93 ntBASIC0.63□□□□□ -2.31
CHGAP10645 MIR4743-201ENST00000584576 69 ntBASIC0.63□□□□□ -2.31
CHGAP10645 MIR4636-201ENST00000582271 80 ntBASIC0.62□□□□□ -2.31
CHGAP10645 MIR610-201ENST00000385139 96 ntBASIC0.61□□□□□ -2.31
CHGAP10645 SNORA40.16-201ENST00000517238 121 ntBASIC0.61□□□□□ -2.31
CHGAP10645 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CHGAP10645 uc_338.36-201ENST00000622331 158 ntBASIC0.6□□□□□ -2.31
CHGAP10645 SNORA40B-201ENST00000385573 128 ntBASIC0.59□□□□□ -2.31
CHGAP10645 RNU6-455P-201ENST00000384681 107 ntBASIC0.58□□□□□ -2.32
CHGAP10645 MIR6507-201ENST00000613630 70 ntBASIC0.57□□□□□ -2.32
CHGAP10645 MIR329-2-201ENST00000385029 84 ntBASIC0.56□□□□□ -2.32
CHGAP10645 AC096531.1-201ENST00000419107 107 ntBASIC0.56□□□□□ -2.32
CHGAP10645 Y_RNA.698-201ENST00000516798 118 ntBASIC0.56□□□□□ -2.32
CHGAP10645 RNU6-810P-201ENST00000364001 107 ntBASIC0.55□□□□□ -2.32
CHGAP10645 RNU6-598P-201ENST00000364017 105 ntBASIC0.53□□□□□ -2.32
CHGAP10645 MIR4464-201ENST00000580818 92 ntBASIC0.53□□□□□ -2.32
CHGAP10645 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
CHGAP10645 RNA5SP134-201ENST00000516492 96 ntBASIC0.52□□□□□ -2.33
CHGAP10645 MIR6888-201ENST00000621977 67 ntBASIC0.52□□□□□ -2.33
CHGAP10645 MIR593-201ENST00000384856 100 ntBASIC0.51□□□□□ -2.33
CHGAP10645 MIR6718-201ENST00000616153 80 ntBASIC0.51□□□□□ -2.33
CHGAP10645 AL445584.3-201ENST00000617173 78 ntBASIC0.51□□□□□ -2.33
CHGAP10645 SNORA42.1-201ENST00000363515 137 ntBASIC0.5□□□□□ -2.33
CHGAP10645 RNU7-165P-201ENST00000458864 60 ntBASIC0.5□□□□□ -2.33
CHGAP10645 AC104408.1-201ENST00000605241 170 ntBASIC0.5□□□□□ -2.33
CHGAP10645 RNU6-696P-201ENST00000390834 107 ntBASIC0.49□□□□□ -2.33
CHGAP10645 MIR5589-201ENST00000579442 60 ntBASIC0.49□□□□□ -2.33
CHGAP10645 MIR4802-201ENST00000581881 80 ntBASIC0.49□□□□□ -2.33
CHGAP10645 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.48□□□□□ -2.33
CHGAP10645 MIR145-201ENST00000384967 88 ntBASIC0.47□□□□□ -2.33
CHGAP10645 RNU7-159P-201ENST00000459284 62 ntBASIC0.47□□□□□ -2.33
CHGAP10645 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
CHGAP10645 RNU6-1262P-201ENST00000516217 96 ntBASIC0.46□□□□□ -2.34
CHGAP10645 RNU7-160P-201ENST00000516660 62 ntBASIC0.46□□□□□ -2.34
CHGAP10645 U2.18-201ENST00000622185 84 ntBASIC0.46□□□□□ -2.34
CHGAP10645 RNA5SP214-201ENST00000363378 118 ntBASIC0.45□□□□□ -2.34
CHGAP10645 Y_RNA.379-201ENST00000365653 102 ntBASIC0.45□□□□□ -2.34
CHGAP10645 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.45□□□□□ -2.34
CHGAP10645 MIR548AA1-201ENST00000384971 97 ntBASIC0.43□□□□□ -2.34
CHGAP10645 RNU6-980P-201ENST00000516925 103 ntBASIC0.43□□□□□ -2.34
CHGAP10645 MIR548X-201ENST00000580069 75 ntBASIC0.43□□□□□ -2.34
CHGAP10645 RNU6-901P-201ENST00000384593 106 ntBASIC0.42□□□□□ -2.34
CHGAP10645 U7.5-201ENST00000517224 61 ntBASIC0.42□□□□□ -2.34
CHGAP10645 MIR4490-201ENST00000582647 84 ntBASIC0.42□□□□□ -2.34
CHGAP10645 MIR5704-201ENST00000584029 77 ntBASIC0.42□□□□□ -2.34
CHGAP10645 RNU6-924P-201ENST00000362926 108 ntBASIC0.41□□□□□ -2.34
CHGAP10645 RNU7-151P-201ENST00000516930 53 ntBASIC0.41□□□□□ -2.34
CHGAP10645 MIR5190-201ENST00000581537 80 ntBASIC0.41□□□□□ -2.34
CHGAP10645 AC244250.2-201ENST00000418731 148 ntBASIC0.4□□□□□ -2.35
CHGAP10645 MIR6854-201ENST00000614935 69 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 268.5 ms