Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNA5SP457-201ENST00000363657 124 ntBASIC0.78□□□□□ -2.28
THBS1P07996 MIR329-2-201ENST00000385029 84 ntBASIC0.78□□□□□ -2.28
THBS1P07996 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
THBS1P07996 uc_338.17-201ENST00000619633 179 ntBASIC0.78□□□□□ -2.28
THBS1P07996 MIR499B-201ENST00000636498 73 ntBASIC0.78□□□□□ -2.28
THBS1P07996 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
THBS1P07996 Y_RNA.115-201ENST00000363272 98 ntBASIC0.76□□□□□ -2.29
THBS1P07996 AC108740.1-201ENST00000498629 225 ntBASIC0.76□□□□□ -2.29
THBS1P07996 RNU6-1262P-201ENST00000516217 96 ntBASIC0.76□□□□□ -2.29
THBS1P07996 SNORD45.2-201ENST00000363552 72 ntBASIC0.75□□□□□ -2.29
THBS1P07996 MIR579-201ENST00000385221 98 ntBASIC0.75□□□□□ -2.29
THBS1P07996 RNU6-1133P-201ENST00000410963 100 ntBASIC0.75□□□□□ -2.29
THBS1P07996 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
THBS1P07996 U2.18-201ENST00000622185 84 ntBASIC0.75□□□□□ -2.29
THBS1P07996 SNORD44.1-201ENST00000363202 61 ntBASIC0.74□□□□□ -2.29
THBS1P07996 Y_RNA.433-201ENST00000384089 102 ntBASIC0.74□□□□□ -2.29
THBS1P07996 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.74□□□□□ -2.29
THBS1P07996 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
THBS1P07996 RNA5SP62-201ENST00000363457 110 ntBASIC0.72□□□□□ -2.29
THBS1P07996 RNU6-945P-201ENST00000383947 107 ntBASIC0.72□□□□□ -2.29
THBS1P07996 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
THBS1P07996 AL391099.1-201ENST00000624635 187 ntBASIC0.72□□□□□ -2.29
THBS1P07996 RNU6-973P-201ENST00000364690 107 ntBASIC0.71□□□□□ -2.3
THBS1P07996 MIR125B1-201ENST00000385236 88 ntBASIC0.71□□□□□ -2.3
THBS1P07996 AL451105.1-201ENST00000450005 189 ntBASIC0.71□□□□□ -2.3
THBS1P07996 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
THBS1P07996 RNU7-55P-201ENST00000459426 62 ntBASIC0.7□□□□□ -2.3
THBS1P07996 MIR924-201ENST00000638017 53 ntBASIC0.7□□□□□ -2.3
THBS1P07996 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
THBS1P07996 RNU6-900P-201ENST00000384498 102 ntBASIC0.69□□□□□ -2.3
THBS1P07996 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
THBS1P07996 SNORD57-201ENST00000448188 72 ntBASIC0.69□□□□□ -2.3
THBS1P07996 SNORD63.1-201ENST00000516178 80 ntBASIC0.69□□□□□ -2.3
THBS1P07996 Y_RNA.698-201ENST00000516798 118 ntBASIC0.69□□□□□ -2.3
THBS1P07996 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
THBS1P07996 RNA5SP257-201ENST00000363023 116 ntBASIC0.68□□□□□ -2.3
THBS1P07996 SNORD114-23-201ENST00000363536 72 ntBASIC0.68□□□□□ -2.3
THBS1P07996 RNU6-924P-201ENST00000362926 108 ntBASIC0.67□□□□□ -2.3
THBS1P07996 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
THBS1P07996 RNA5SP330-201ENST00000517096 96 ntBASIC0.67□□□□□ -2.3
THBS1P07996 MIR545-201ENST00000385085 106 ntBASIC0.66□□□□□ -2.3
THBS1P07996 MIR892B-201ENST00000401279 77 ntBASIC0.66□□□□□ -2.3
THBS1P07996 U7.5-201ENST00000517224 61 ntBASIC0.66□□□□□ -2.3
THBS1P07996 CR383656.4-201ENST00000546909 122 ntBASIC0.66□□□□□ -2.3
THBS1P07996 MIR548AL-201ENST00000578416 97 ntBASIC0.66□□□□□ -2.3
THBS1P07996 AL445584.3-201ENST00000617173 78 ntBASIC0.66□□□□□ -2.3
THBS1P07996 AC010487.4-201ENST00000637027 61 ntBASIC0.66□□□□□ -2.3
THBS1P07996 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
THBS1P07996 MIR148A-201ENST00000362215 68 ntBASIC0.65□□□□□ -2.31
THBS1P07996 RNU6-127P-201ENST00000390897 107 ntBASIC0.65□□□□□ -2.31
THBS1P07996 Y_RNA.613-201ENST00000410726 97 ntBASIC0.65□□□□□ -2.31
THBS1P07996 RNA5SP476-201ENST00000516613 103 ntBASIC0.65□□□□□ -2.31
THBS1P07996 MIR6513-201ENST00000621188 64 ntBASIC0.65□□□□□ -2.31
THBS1P07996 Y_RNA.321-201ENST00000365149 102 ntBASIC0.64□□□□□ -2.31
THBS1P07996 RNU6-1267P-201ENST00000410747 107 ntBASIC0.64□□□□□ -2.31
THBS1P07996 AC096531.1-201ENST00000419107 107 ntBASIC0.64□□□□□ -2.31
THBS1P07996 RNU6-1174P-201ENST00000517278 101 ntBASIC0.64□□□□□ -2.31
THBS1P07996 AC104408.1-201ENST00000605241 170 ntBASIC0.64□□□□□ -2.31
THBS1P07996 MIR8087-201ENST00000612745 78 ntBASIC0.64□□□□□ -2.31
THBS1P07996 MIR6888-201ENST00000621977 67 ntBASIC0.64□□□□□ -2.31
THBS1P07996 MIR6514-201ENST00000622549 70 ntBASIC0.64□□□□□ -2.31
THBS1P07996 HAR1A.1-201ENST00000459583 118 ntBASIC0.63□□□□□ -2.31
THBS1P07996 MIR4464-201ENST00000580818 92 ntBASIC0.63□□□□□ -2.31
THBS1P07996 RNU7-88P-201ENST00000458752 63 ntBASIC0.62□□□□□ -2.31
THBS1P07996 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
THBS1P07996 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
THBS1P07996 uc_338.36-201ENST00000622331 158 ntBASIC0.61□□□□□ -2.31
THBS1P07996 MIRLET7D-201ENST00000362263 87 ntBASIC0.6□□□□□ -2.31
THBS1P07996 Y_RNA.139-201ENST00000363464 102 ntBASIC0.6□□□□□ -2.31
THBS1P07996 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
THBS1P07996 SNORA68.3-201ENST00000515906 83 ntBASIC0.6□□□□□ -2.31
THBS1P07996 MIR103A1-201ENST00000362165 78 ntBASIC0.59□□□□□ -2.31
THBS1P07996 RNU6-1204P-201ENST00000363948 107 ntBASIC0.59□□□□□ -2.31
THBS1P07996 RNU6-455P-201ENST00000384681 107 ntBASIC0.59□□□□□ -2.31
THBS1P07996 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
THBS1P07996 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
THBS1P07996 AC090625.1-201ENST00000357130 210 ntBASIC0.58□□□□□ -2.32
THBS1P07996 MIR330-201ENST00000362196 94 ntBASIC0.58□□□□□ -2.32
THBS1P07996 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
THBS1P07996 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.58□□□□□ -2.32
THBS1P07996 RNU6-1111P-201ENST00000391118 107 ntBASIC0.57□□□□□ -2.32
THBS1P07996 AC069113.3-201ENST00000521019 150 ntBASIC0.57□□□□□ -2.32
THBS1P07996 MIR4711-201ENST00000578274 70 ntBASIC0.57□□□□□ -2.32
THBS1P07996 MIR4743-201ENST00000584576 69 ntBASIC0.57□□□□□ -2.32
THBS1P07996 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
THBS1P07996 MIR1197-201ENST00000408818 88 ntBASIC0.56□□□□□ -2.32
THBS1P07996 RNU6-180P-201ENST00000516697 61 ntBASIC0.56□□□□□ -2.32
THBS1P07996 RNU6-815P-201ENST00000384080 113 ntBASIC0.55□□□□□ -2.32
THBS1P07996 MIR643-201ENST00000385267 97 ntBASIC0.55□□□□□ -2.32
THBS1P07996 RNA5SP163-201ENST00000410304 99 ntBASIC0.55□□□□□ -2.32
THBS1P07996 RNU6-901P-201ENST00000384593 106 ntBASIC0.54□□□□□ -2.32
THBS1P07996 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
THBS1P07996 MIR6854-201ENST00000614935 69 ntBASIC0.54□□□□□ -2.32
THBS1P07996 MIR6086-201ENST00000638065 55 ntBASIC0.54□□□□□ -2.32
THBS1P07996 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
THBS1P07996 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
THBS1P07996 MIR610-201ENST00000385139 96 ntBASIC0.53□□□□□ -2.32
THBS1P07996 RNU6-732P-201ENST00000516033 103 ntBASIC0.53□□□□□ -2.32
THBS1P07996 MIR3170-201ENST00000582699 77 ntBASIC0.53□□□□□ -2.32
THBS1P07996 RNU6-1327P-201ENST00000365302 105 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms