Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MIR593-201ENST00000384856 100 ntBASIC0.18□□□□□ -2.38
SLC28A2O43868 AL021921.1-201ENST00000442774 93 ntBASIC0.18□□□□□ -2.38
SLC28A2O43868 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
SLC28A2O43868 SNORD114-31-201ENST00000363219 75 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 Y_RNA.246-201ENST00000364495 108 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 Y_RNA.325-201ENST00000365171 122 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 RNU6-302P-201ENST00000365249 107 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 MIR610-201ENST00000385139 96 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 RNU6-1246P-201ENST00000391064 107 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 MIR4768-201ENST00000585270 74 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 MIR6507-201ENST00000613630 70 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 SNORA25.5-201ENST00000363782 126 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 MIR145-201ENST00000384967 88 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 MIR892B-201ENST00000401279 77 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 MIR371B-201ENST00000638082 66 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 RNA5SP192-201ENST00000364404 120 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 SNORD113-2-201ENST00000391082 72 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.15□□□□□ -2.39
SLC28A2O43868 RNA5SP470-201ENST00000516463 106 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 MIR548AG1-201ENST00000579932 66 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 MIR4493-201ENST00000584016 73 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 MIR4743-201ENST00000584576 69 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 RNU6-92P-201ENST00000605893 104 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 MIR409-201ENST00000362237 79 ntBASIC0.14□□□□□ -2.39
SLC28A2O43868 SNORD115-23-201ENST00000364461 82 ntBASIC0.14□□□□□ -2.39
SLC28A2O43868 RNU7-165P-201ENST00000458864 60 ntBASIC0.14□□□□□ -2.39
SLC28A2O43868 MIR148A-201ENST00000362215 68 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 Y_RNA.74-201ENST00000362911 99 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 RNU7-55P-201ENST00000459426 62 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 RNU7-154P-201ENST00000516194 62 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 AP001180.6-201ENST00000584918 159 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 SNORD114-5-201ENST00000362928 70 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 RNU6-669P-201ENST00000365575 107 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 MIR604-201ENST00000384880 94 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 RNA5SP67-201ENST00000516422 131 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 AL353803.5-201ENST00000599815 141 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 RNU6-900P-201ENST00000384498 102 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 RNU6-455P-201ENST00000384681 107 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 SNORA41B-201ENST00000384785 128 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 MIR4432-201ENST00000581823 84 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 AC108676.2-201ENST00000605225 163 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 SNORD60.1-201ENST00000362451 73 ntBASIC0.1□□□□□ -2.39
SLC28A2O43868 Y_RNA.282-201ENST00000364793 102 ntBASIC0.1□□□□□ -2.39
SLC28A2O43868 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
SLC28A2O43868 uc_338.36-201ENST00000622331 158 ntBASIC0.1□□□□□ -2.39
SLC28A2O43868 RNU6-940P-201ENST00000363433 104 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 AC244250.2-201ENST00000418731 148 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 RNU6-122P-201ENST00000516818 107 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 MIR466-201ENST00000580653 84 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 AL391099.1-201ENST00000624635 187 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 MIR655-201ENST00000362159 97 ntBASIC0.08□□□□□ -2.4
SLC28A2O43868 RNU6-973P-201ENST00000364690 107 ntBASIC0.08□□□□□ -2.4
SLC28A2O43868 snoR1.1-201ENST00000628177 80 ntBASIC0.08□□□□□ -2.4
SLC28A2O43868 RNU6-929P-201ENST00000384429 107 ntBASIC0.07□□□□□ -2.4
SLC28A2O43868 MIR527-201ENST00000385244 85 ntBASIC0.07□□□□□ -2.4
SLC28A2O43868 RNA5SP266-201ENST00000410273 108 ntBASIC0.07□□□□□ -2.4
SLC28A2O43868 AC096531.1-201ENST00000419107 107 ntBASIC0.07□□□□□ -2.4
SLC28A2O43868 RNU6-1133P-201ENST00000410963 100 ntBASIC0.06□□□□□ -2.4
SLC28A2O43868 Y_RNA.698-201ENST00000516798 118 ntBASIC0.06□□□□□ -2.4
SLC28A2O43868 MIR4464-201ENST00000580818 92 ntBASIC0.06□□□□□ -2.4
SLC28A2O43868 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
SLC28A2O43868 SNORD116-16-201ENST00000384533 92 ntBASIC0.05□□□□□ -2.4
SLC28A2O43868 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
SLC28A2O43868 MIR6888-201ENST00000621977 67 ntBASIC0.05□□□□□ -2.4
SLC28A2O43868 SNORD95.1-201ENST00000364099 68 ntBASIC0.04□□□□□ -2.4
SLC28A2O43868 SNORD56B-201ENST00000384713 71 ntBASIC0.04□□□□□ -2.4
SLC28A2O43868 MIR5704-201ENST00000584029 77 ntBASIC0.04□□□□□ -2.4
SLC28A2O43868 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
SLC28A2O43868 Y_RNA.109-201ENST00000363215 102 ntBASIC0.03□□□□□ -2.4
SLC28A2O43868 RNU6-46P-201ENST00000383860 107 ntBASIC0.03□□□□□ -2.4
SLC28A2O43868 MIR3938-201ENST00000582157 103 ntBASIC0.03□□□□□ -2.4
SLC28A2O43868 MIR8068-201ENST00000618032 68 ntBASIC0.03□□□□□ -2.4
SLC28A2O43868 RNU6-1079P-201ENST00000362861 110 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 SNORA62.4-201ENST00000365504 151 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 RNU6-246P-201ENST00000384702 107 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 MIR633-201ENST00000384821 98 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 AL445584.3-201ENST00000617173 78 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 RNU6-499P-201ENST00000365615 107 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 RNU6-458P-201ENST00000384179 107 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 AC104692.1-201ENST00000472406 90 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 MIR4280-201ENST00000582178 76 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 U6.58-201ENST00000613107 107 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 MIR101-1-201ENST00000362265 75 ntBASIC0□□□□□ -2.41
SLC28A2O43868 Y_RNA.236-201ENST00000364427 111 ntBASIC0□□□□□ -2.41
SLC28A2O43868 SNORD49B-201ENST00000365172 72 ntBASIC0□□□□□ -2.41
SLC28A2O43868 RNU6-901P-201ENST00000384593 106 ntBASIC0□□□□□ -2.41
SLC28A2O43868 Y_RNA.610-201ENST00000410681 103 ntBASIC0□□□□□ -2.41
SLC28A2O43868 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
SLC28A2O43868 MIR6854-201ENST00000614935 69 ntBASIC0□□□□□ -2.41
SLC28A2O43868 RNU6-446P-201ENST00000362827 106 ntBASIC-0.01□□□□□ -2.41
SLC28A2O43868 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.01□□□□□ -2.41
SLC28A2O43868 AC114755.3-201ENST00000481111 251 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms