Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 SNORD118-201ENST00000363593 134 ntBASIC2.38□□□□□ -2.03
MSH5O43196 MIR9-3-201ENST00000385084 90 ntBASIC2.38□□□□□ -2.03
MSH5O43196 MIR760-201ENST00000390220 80 ntBASIC2.38□□□□□ -2.03
MSH5O43196 RPL35AP4-201ENST00000412007 102 ntBASIC2.38□□□□□ -2.03
MSH5O43196 AL353691.2-201ENST00000443795 59 ntBASIC2.38□□□□□ -2.03
MSH5O43196 RNA5SP255-201ENST00000516370 107 ntBASIC2.38□□□□□ -2.03
MSH5O43196 MIR676-201ENST00000390702 67 ntBASIC2.37□□□□□ -2.03
MSH5O43196 RNA5SP325-201ENST00000363756 130 ntBASIC2.36□□□□□ -2.03
MSH5O43196 RNU6-695P-201ENST00000391157 104 ntBASIC2.36□□□□□ -2.03
MSH5O43196 SCARNA11.2-201ENST00000517183 154 ntBASIC2.36□□□□□ -2.03
MSH5O43196 RNU6-929P-201ENST00000384429 107 ntBASIC2.35□□□□□ -2.03
MSH5O43196 SNORA67.5-201ENST00000391036 107 ntBASIC2.35□□□□□ -2.03
MSH5O43196 RNU6-900P-201ENST00000384498 102 ntBASIC2.34□□□□□ -2.03
MSH5O43196 RNU7-95P-201ENST00000459222 64 ntBASIC2.34□□□□□ -2.03
MSH5O43196 OR2A41P-201ENST00000473586 105 ntBASIC2.34□□□□□ -2.03
MSH5O43196 MIR502-201ENST00000606349 86 ntBASIC2.34□□□□□ -2.03
MSH5O43196 MIR499B-201ENST00000636498 73 ntBASIC2.33□□□□□ -2.04
MSH5O43196 Y_RNA.327-201ENST00000365201 102 ntBASIC2.32□□□□□ -2.04
MSH5O43196 AL096840.1-201ENST00000603287 93 ntBASIC2.32□□□□□ -2.04
MSH5O43196 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC2.32□□□□□ -2.04
MSH5O43196 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MSH5O43196 SNORA36.2-201ENST00000384004 127 ntBASIC2.31□□□□□ -2.04
MSH5O43196 RNU6-912P-201ENST00000363800 104 ntBASIC2.29□□□□□ -2.04
MSH5O43196 SNORA26.4-201ENST00000391188 123 ntBASIC2.29□□□□□ -2.04
MSH5O43196 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
MSH5O43196 MIR4419B-201ENST00000577260 68 ntBASIC2.28□□□□□ -2.04
MSH5O43196 MIR6504-201ENST00000613520 61 ntBASIC2.27□□□□□ -2.05
MSH5O43196 SNORA16.1-201ENST00000364597 132 ntBASIC2.26□□□□□ -2.05
MSH5O43196 MIR1276-201ENST00000408707 83 ntBASIC2.26□□□□□ -2.05
MSH5O43196 Y_RNA.603-201ENST00000410571 108 ntBASIC2.26□□□□□ -2.05
MSH5O43196 RNU7-129P-201ENST00000516128 62 ntBASIC2.26□□□□□ -2.05
MSH5O43196 RNA5SP128-201ENST00000365305 116 ntBASIC2.25□□□□□ -2.05
MSH5O43196 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.25□□□□□ -2.05
MSH5O43196 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.25□□□□□ -2.05
MSH5O43196 RNU6-563P-201ENST00000364872 108 ntBASIC2.24□□□□□ -2.05
MSH5O43196 SNORD114-24-201ENST00000365029 72 ntBASIC2.24□□□□□ -2.05
MSH5O43196 RNU6-42P-201ENST00000384165 107 ntBASIC2.24□□□□□ -2.05
MSH5O43196 RNU6-1024P-201ENST00000384199 107 ntBASIC2.24□□□□□ -2.05
MSH5O43196 RNU6-455P-201ENST00000384681 107 ntBASIC2.24□□□□□ -2.05
MSH5O43196 MIR6734-201ENST00000621166 68 ntBASIC2.24□□□□□ -2.05
MSH5O43196 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
MSH5O43196 SNORA40.8-201ENST00000411034 126 ntBASIC2.23□□□□□ -2.05
MSH5O43196 MIR656-201ENST00000385224 78 ntBASIC2.22□□□□□ -2.05
MSH5O43196 AC114755.3-201ENST00000481111 251 ntBASIC2.22□□□□□ -2.05
MSH5O43196 RNU1-42P-201ENST00000364033 160 ntBASIC2.21□□□□□ -2.06
MSH5O43196 AC108740.1-201ENST00000498629 225 ntBASIC2.21□□□□□ -2.06
MSH5O43196 SNORD53B-201ENST00000577887 78 ntBASIC2.21□□□□□ -2.06
MSH5O43196 MIR618-201ENST00000385287 98 ntBASIC2.2□□□□□ -2.06
MSH5O43196 MIR4452-201ENST00000583004 71 ntBASIC2.2□□□□□ -2.06
MSH5O43196 MIR151B-201ENST00000584249 96 ntBASIC2.2□□□□□ -2.06
MSH5O43196 RNU1-93P-201ENST00000364704 169 ntBASIC2.19□□□□□ -2.06
MSH5O43196 MIR140-201ENST00000385282 100 ntBASIC2.19□□□□□ -2.06
MSH5O43196 RNU6-848P-201ENST00000515948 107 ntBASIC2.19□□□□□ -2.06
MSH5O43196 RNU6-617P-201ENST00000516147 107 ntBASIC2.19□□□□□ -2.06
MSH5O43196 RNU6-473P-201ENST00000516164 107 ntBASIC2.19□□□□□ -2.06
MSH5O43196 RNU6-1049P-201ENST00000516414 107 ntBASIC2.19□□□□□ -2.06
MSH5O43196 AC120024.2-201ENST00000576526 175 ntBASIC2.19□□□□□ -2.06
MSH5O43196 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.19□□□□□ -2.06
MSH5O43196 SNORD18C-201ENST00000362704 69 ntBASIC2.17□□□□□ -2.06
MSH5O43196 SNORD71-201ENST00000411292 86 ntBASIC2.17□□□□□ -2.06
MSH5O43196 RNA5SP220-201ENST00000516298 104 ntBASIC2.17□□□□□ -2.06
MSH5O43196 SNORD115-33-201ENST00000363723 82 ntBASIC2.16□□□□□ -2.06
MSH5O43196 RNU6-901P-201ENST00000384593 106 ntBASIC2.15□□□□□ -2.07
MSH5O43196 RNU6-284P-201ENST00000411105 106 ntBASIC2.15□□□□□ -2.07
MSH5O43196 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC2.15□□□□□ -2.07
MSH5O43196 RNA5SP480-201ENST00000516840 109 ntBASIC2.14□□□□□ -2.07
MSH5O43196 RNA5SP102-201ENST00000516865 106 ntBASIC2.12□□□□□ -2.07
MSH5O43196 SNORD56B-201ENST00000384713 71 ntBASIC2.11□□□□□ -2.07
MSH5O43196 MIR520E-201ENST00000384867 87 ntBASIC2.11□□□□□ -2.07
MSH5O43196 MIR507-201ENST00000385234 94 ntBASIC2.11□□□□□ -2.07
MSH5O43196 MIR23C-201ENST00000579846 100 ntBASIC2.11□□□□□ -2.07
MSH5O43196 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC2.11□□□□□ -2.07
MSH5O43196 SNORA67.6-201ENST00000391093 99 ntBASIC2.1□□□□□ -2.07
MSH5O43196 SNORD18.2-201ENST00000459604 70 ntBASIC2.1□□□□□ -2.07
MSH5O43196 MIR320A-201ENST00000385302 82 ntBASIC2.09□□□□□ -2.07
MSH5O43196 MIR4255-201ENST00000579351 72 ntBASIC2.09□□□□□ -2.07
MSH5O43196 SNORD114-22-201ENST00000365423 72 ntBASIC2.08□□□□□ -2.08
MSH5O43196 RNU6-997P-201ENST00000384725 107 ntBASIC2.07□□□□□ -2.08
MSH5O43196 AL353765.1-201ENST00000605514 183 ntBASIC2.07□□□□□ -2.08
MSH5O43196 MIR4421-201ENST00000578133 69 ntBASIC2.05□□□□□ -2.08
MSH5O43196 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
MSH5O43196 RNU6-1340P-201ENST00000384438 107 ntBASIC2.04□□□□□ -2.08
MSH5O43196 Y_RNA.540-201ENST00000384638 111 ntBASIC2.04□□□□□ -2.08
MSH5O43196 RNA5SP61-201ENST00000516453 100 ntBASIC2.04□□□□□ -2.08
MSH5O43196 MIR1254-1-201ENST00000408257 97 ntBASIC2.02□□□□□ -2.09
MSH5O43196 MIR7974-201ENST00000615835 79 ntBASIC2.01□□□□□ -2.09
MSH5O43196 MIR1323-201ENST00000408090 73 ntBASIC2□□□□□ -2.09
MSH5O43196 AL353770.2-201ENST00000620024 78 ntBASIC2□□□□□ -2.09
MSH5O43196 MIR6514-201ENST00000622549 70 ntBASIC2□□□□□ -2.09
MSH5O43196 SNORA31.24-201ENST00000517232 57 ntBASIC1.99□□□□□ -2.09
MSH5O43196 MIR4285-201ENST00000581001 85 ntBASIC1.99□□□□□ -2.09
MSH5O43196 uc_338.17-201ENST00000619633 179 ntBASIC1.99□□□□□ -2.09
MSH5O43196 RNA5SP404-201ENST00000517118 132 ntBASIC1.98□□□□□ -2.09
MSH5O43196 MIR6515-201ENST00000619843 57 ntBASIC1.98□□□□□ -2.09
MSH5O43196 RNU6-127P-201ENST00000390897 107 ntBASIC1.97□□□□□ -2.09
MSH5O43196 MIR6078-201ENST00000611069 100 ntBASIC1.97□□□□□ -2.09
MSH5O43196 MIR6779-201ENST00000617283 64 ntBASIC1.97□□□□□ -2.09
MSH5O43196 AL445193.1-201ENST00000441183 141 ntBASIC1.96□□□□□ -2.1
MSH5O43196 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MSH5O43196 AC090616.4-201ENST00000448026 115 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms