Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-1312P-201ENST00000362425 108 ntBASIC0.5□□□□□ -2.33
FOXN1O15353 RNA5SP368-201ENST00000364298 116 ntBASIC0.5□□□□□ -2.33
FOXN1O15353 MIR527-201ENST00000385244 85 ntBASIC0.5□□□□□ -2.33
FOXN1O15353 MIR876-201ENST00000401147 81 ntBASIC0.5□□□□□ -2.33
FOXN1O15353 RNU6-782P-201ENST00000516852 104 ntBASIC0.5□□□□□ -2.33
FOXN1O15353 MIR5190-201ENST00000581537 80 ntBASIC0.5□□□□□ -2.33
FOXN1O15353 MIR4723-201ENST00000585070 81 ntBASIC0.5□□□□□ -2.33
FOXN1O15353 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
FOXN1O15353 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
FOXN1O15353 SNORD116-16-201ENST00000384533 92 ntBASIC0.49□□□□□ -2.33
FOXN1O15353 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
FOXN1O15353 SCARNA11.2-201ENST00000517183 154 ntBASIC0.49□□□□□ -2.33
FOXN1O15353 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
FOXN1O15353 RNA5SP98-201ENST00000363158 137 ntBASIC0.48□□□□□ -2.33
FOXN1O15353 Y_RNA.185-201ENST00000363894 100 ntBASIC0.48□□□□□ -2.33
FOXN1O15353 RNA5SP266-201ENST00000410273 108 ntBASIC0.48□□□□□ -2.33
FOXN1O15353 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
FOXN1O15353 RNU6-863P-201ENST00000515989 104 ntBASIC0.48□□□□□ -2.33
FOXN1O15353 RNU7-154P-201ENST00000516194 62 ntBASIC0.48□□□□□ -2.33
FOXN1O15353 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
FOXN1O15353 RNU6-520P-201ENST00000384717 104 ntBASIC0.47□□□□□ -2.33
FOXN1O15353 RNA5SP470-201ENST00000516463 106 ntBASIC0.47□□□□□ -2.33
FOXN1O15353 RNU6-231P-201ENST00000517122 103 ntBASIC0.46□□□□□ -2.34
FOXN1O15353 AP000676.1-201ENST00000533307 52 ntBASIC0.46□□□□□ -2.34
FOXN1O15353 RNU6-936P-201ENST00000384005 107 ntBASIC0.45□□□□□ -2.34
FOXN1O15353 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.45□□□□□ -2.34
FOXN1O15353 Y_RNA.722-201ENST00000517279 114 ntBASIC0.45□□□□□ -2.34
FOXN1O15353 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.44□□□□□ -2.34
FOXN1O15353 Y_RNA.109-201ENST00000363215 102 ntBASIC0.44□□□□□ -2.34
FOXN1O15353 RNU6-815P-201ENST00000384080 113 ntBASIC0.44□□□□□ -2.34
FOXN1O15353 MIR106A-201ENST00000384870 81 ntBASIC0.44□□□□□ -2.34
FOXN1O15353 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
FOXN1O15353 RNU6-127P-201ENST00000390897 107 ntBASIC0.43□□□□□ -2.34
FOXN1O15353 SNORD116.2-201ENST00000391251 93 ntBASIC0.43□□□□□ -2.34
FOXN1O15353 RNU7-119P-201ENST00000459279 63 ntBASIC0.43□□□□□ -2.34
FOXN1O15353 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.43□□□□□ -2.34
FOXN1O15353 MIR4493-201ENST00000584016 73 ntBASIC0.43□□□□□ -2.34
FOXN1O15353 AL353803.5-201ENST00000599815 141 ntBASIC0.43□□□□□ -2.34
FOXN1O15353 Y_RNA.457-201ENST00000384237 111 ntBASIC0.42□□□□□ -2.34
FOXN1O15353 RNU6-246P-201ENST00000384702 107 ntBASIC0.42□□□□□ -2.34
FOXN1O15353 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.42□□□□□ -2.34
FOXN1O15353 SNORD115-23-201ENST00000364461 82 ntBASIC0.41□□□□□ -2.34
FOXN1O15353 MIR643-201ENST00000385267 97 ntBASIC0.41□□□□□ -2.34
FOXN1O15353 RNA5SP67-201ENST00000516422 131 ntBASIC0.41□□□□□ -2.34
FOXN1O15353 SNORD1B-201ENST00000363091 84 ntBASIC0.4□□□□□ -2.35
FOXN1O15353 RNU6-458P-201ENST00000384179 107 ntBASIC0.4□□□□□ -2.35
FOXN1O15353 RNU6-1184P-201ENST00000384588 108 ntBASIC0.4□□□□□ -2.35
FOXN1O15353 RNU6-808P-201ENST00000391233 108 ntBASIC0.4□□□□□ -2.35
FOXN1O15353 MIR7110-201ENST00000612638 86 ntBASIC0.4□□□□□ -2.35
FOXN1O15353 U6.58-201ENST00000613107 107 ntBASIC0.4□□□□□ -2.35
FOXN1O15353 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
FOXN1O15353 AC104692.1-201ENST00000472406 90 ntBASIC0.39□□□□□ -2.35
FOXN1O15353 AC108740.1-201ENST00000498629 225 ntBASIC0.39□□□□□ -2.35
FOXN1O15353 SNORA40.16-201ENST00000517238 121 ntBASIC0.39□□□□□ -2.35
FOXN1O15353 AC108676.2-201ENST00000605225 163 ntBASIC0.39□□□□□ -2.35
FOXN1O15353 SNORD95.1-201ENST00000364099 68 ntBASIC0.38□□□□□ -2.35
FOXN1O15353 RNU6-172P-201ENST00000411000 93 ntBASIC0.38□□□□□ -2.35
FOXN1O15353 uc_338.36-201ENST00000622331 158 ntBASIC0.38□□□□□ -2.35
FOXN1O15353 MIR604-201ENST00000384880 94 ntBASIC0.37□□□□□ -2.35
FOXN1O15353 MIR1468-201ENST00000410600 86 ntBASIC0.37□□□□□ -2.35
FOXN1O15353 AC069113.3-201ENST00000521019 150 ntBASIC0.37□□□□□ -2.35
FOXN1O15353 snoR1.1-201ENST00000628177 80 ntBASIC0.37□□□□□ -2.35
FOXN1O15353 RNU6-810P-201ENST00000364001 107 ntBASIC0.36□□□□□ -2.35
FOXN1O15353 MIR548H2-201ENST00000408874 88 ntBASIC0.36□□□□□ -2.35
FOXN1O15353 Y_RNA.698-201ENST00000516798 118 ntBASIC0.36□□□□□ -2.35
FOXN1O15353 MIR4432-201ENST00000581823 84 ntBASIC0.36□□□□□ -2.35
FOXN1O15353 AP001180.6-201ENST00000584918 159 ntBASIC0.36□□□□□ -2.35
FOXN1O15353 MIR6514-201ENST00000622549 70 ntBASIC0.36□□□□□ -2.35
FOXN1O15353 MIR429-201ENST00000362106 83 ntBASIC0.35□□□□□ -2.35
FOXN1O15353 RNU6-598P-201ENST00000364017 105 ntBASIC0.35□□□□□ -2.35
FOXN1O15353 RNA5SP163-201ENST00000410304 99 ntBASIC0.34□□□□□ -2.36
FOXN1O15353 RNU7-55P-201ENST00000459426 62 ntBASIC0.34□□□□□ -2.36
FOXN1O15353 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.34□□□□□ -2.36
FOXN1O15353 AL391099.1-201ENST00000624635 187 ntBASIC0.34□□□□□ -2.36
FOXN1O15353 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
FOXN1O15353 SNORA40B-201ENST00000385573 128 ntBASIC0.33□□□□□ -2.36
FOXN1O15353 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
FOXN1O15353 RNU6-180P-201ENST00000516697 61 ntBASIC0.33□□□□□ -2.36
FOXN1O15353 MIR4464-201ENST00000580818 92 ntBASIC0.33□□□□□ -2.36
FOXN1O15353 MIR6888-201ENST00000621977 67 ntBASIC0.33□□□□□ -2.36
FOXN1O15353 U2.18-201ENST00000622185 84 ntBASIC0.33□□□□□ -2.36
FOXN1O15353 RNU6-1133P-201ENST00000410963 100 ntBASIC0.32□□□□□ -2.36
FOXN1O15353 RNU6-980P-201ENST00000516925 103 ntBASIC0.32□□□□□ -2.36
FOXN1O15353 CR383656.4-201ENST00000546909 122 ntBASIC0.32□□□□□ -2.36
FOXN1O15353 MIR6507-201ENST00000613630 70 ntBASIC0.32□□□□□ -2.36
FOXN1O15353 SNORD114-31-201ENST00000363219 75 ntBASIC0.31□□□□□ -2.36
FOXN1O15353 RNU6-900P-201ENST00000384498 102 ntBASIC0.31□□□□□ -2.36
FOXN1O15353 MIR579-201ENST00000385221 98 ntBASIC0.31□□□□□ -2.36
FOXN1O15353 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.31□□□□□ -2.36
FOXN1O15353 MIR4490-201ENST00000582647 84 ntBASIC0.31□□□□□ -2.36
FOXN1O15353 RNU6-973P-201ENST00000364690 107 ntBASIC0.3□□□□□ -2.36
FOXN1O15353 RNU6-455P-201ENST00000384681 107 ntBASIC0.3□□□□□ -2.36
FOXN1O15353 MIR593-201ENST00000384856 100 ntBASIC0.3□□□□□ -2.36
FOXN1O15353 RNU6-1262P-201ENST00000516217 96 ntBASIC0.3□□□□□ -2.36
FOXN1O15353 AL445584.3-201ENST00000617173 78 ntBASIC0.3□□□□□ -2.36
FOXN1O15353 RNU6-753P-201ENST00000363926 107 ntBASIC0.29□□□□□ -2.36
FOXN1O15353 RNU7-88P-201ENST00000458752 63 ntBASIC0.29□□□□□ -2.36
FOXN1O15353 RNU7-151P-201ENST00000516930 53 ntBASIC0.29□□□□□ -2.36
FOXN1O15353 U7.5-201ENST00000517224 61 ntBASIC0.29□□□□□ -2.36
FOXN1O15353 Y_RNA.379-201ENST00000365653 102 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms